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The map label for this gene is ctaE [H]

Identifier: 71906085

GI number: 71906085

Start: 488997

End: 489596

Strand: Reverse

Name: ctaE [H]

Synonym: Daro_0445

Alternate gene names: 71906085

Gene position: 489596-488997 (Counterclockwise)

Preceding gene: 71906093

Following gene: 71906084

Centisome position: 10.88

GC content: 60.0

Gene sequence:

>600_bases
ATGACCGCCGTCACCATCGACGAACCCCCCCCGCCGGAAGACAGCACCCGCCGCATTCCCGGCAACAAGGGGATGTGGGC
CGGCATTACCTGCGAGTTTGTCGAGTTCACCGTGCTCTTCGCGGTCTATTTCATAGCCCGCGCCCATTTTCCCGATGCCT
TTCACGCCGGGGCACAAAAGCTCTCAGTCATTTCCGGCACGACCATCACCCTGTTGATGATCACCAGCAGCTACTTCATT
GCCTGCTCGCTCAACGCCATCCGTCAGGACAAGCATCGCGCCGCCGTCATCTGGCTGGTCGTCGGGCTGATCATCGCCCT
CGGTTACCCGCTGACCAAGGCGCTGGAAATCAACTGGAACCTGGCGCACGGCATCAACGGCGAATCAGGCATCTTCTTCA
CTGTCTATTACTACCTGACCTTCACCCATCTGGTGCATGCCACCTGGGGCATCCTTGGCATCCTGTGGGTGCTGGCCCGA
CTGCTATTCCACGGCTATTCATCCAGGGACTACGCCGGCCTGGAGGCACTGGCCTGTTACTGGCACGCCACCGACATCAT
CTGGCTGGTCATCTTCCCGCTGTTCTACGTGCTGGCCTGA

Upstream 100 bases:

>100_bases
TTTTTGTTTCGTGTCACATGAACCTGATCCGTTGATGAACATCAATGCCCGGCACAAGGCGTAACGGAACAATGAAAGCC
ACCCTACCCTTGGCAAAAAA

Downstream 100 bases:

>100_bases
ACATGGACACGAAAACCAATCATTTCCGCCAACTGACAGCCGCCTGGCTGGCGCTCGTCACGCTGACACTGCTCAGCCTG
GGGCTCAGCGAGTGGTTCCG

Product: putative denitrification protein NorE

Products: NA

Alternate protein names: Cytochrome aa3 subunit 3; Cytochrome c oxidase polypeptide III [H]

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MTAVTIDEPPPPEDSTRRIPGNKGMWAGITCEFVEFTVLFAVYFIARAHFPDAFHAGAQKLSVISGTTITLLMITSSYFI
ACSLNAIRQDKHRAAVIWLVVGLIIALGYPLTKALEINWNLAHGINGESGIFFTVYYYLTFTHLVHATWGILGILWVLAR
LLFHGYSSRDYAGLEALACYWHATDIIWLVIFPLFYVLA

Sequences:

>Translated_199_residues
MTAVTIDEPPPPEDSTRRIPGNKGMWAGITCEFVEFTVLFAVYFIARAHFPDAFHAGAQKLSVISGTTITLLMITSSYFI
ACSLNAIRQDKHRAAVIWLVVGLIIALGYPLTKALEINWNLAHGINGESGIFFTVYYYLTFTHLVHATWGILGILWVLAR
LLFHGYSSRDYAGLEALACYWHATDIIWLVIFPLFYVLA
>Mature_198_residues
TAVTIDEPPPPEDSTRRIPGNKGMWAGITCEFVEFTVLFAVYFIARAHFPDAFHAGAQKLSVISGTTITLLMITSSYFIA
CSLNAIRQDKHRAAVIWLVVGLIIALGYPLTKALEINWNLAHGINGESGIFFTVYYYLTFTHLVHATWGILGILWVLARL
LFHGYSSRDYAGLEALACYWHATDIIWLVIFPLFYVLA

Specific function: Cytochrome O Terminal Oxidase Complex Is The Component Of The Aerobic Respiratory Chain Of E.Coli That Predominates When Cells Are Grown At High Aeration. [C]

COG id: COG1845

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000298
- InterPro:   IPR013833 [H]

Pfam domain/function: PF00510 COX3 [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 22288; Mature: 22157

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: PS50253 COX3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAVTIDEPPPPEDSTRRIPGNKGMWAGITCEFVEFTVLFAVYFIARAHFPDAFHAGAQK
CCEEECCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LSVISGTTITLLMITSSYFIACSLNAIRQDKHRAAVIWLVVGLIIALGYPLTKALEINWN
HEEECCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECEE
LAHGINGESGIFFTVYYYLTFTHLVHATWGILGILWVLARLLFHGYSSRDYAGLEALACY
EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
WHATDIIWLVIFPLFYVLA
HHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
TAVTIDEPPPPEDSTRRIPGNKGMWAGITCEFVEFTVLFAVYFIARAHFPDAFHAGAQK
CEEECCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LSVISGTTITLLMITSSYFIACSLNAIRQDKHRAAVIWLVVGLIIALGYPLTKALEINWN
HEEECCCCEEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECEE
LAHGINGESGIFFTVYYYLTFTHLVHATWGILGILWVLARLLFHGYSSRDYAGLEALACY
EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
WHATDIIWLVIFPLFYVLA
HHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]