| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71906011
Identifier: 71906011
GI number: 71906011
Start: 401092
End: 402120
Strand: Reverse
Name: 71906011
Synonym: Daro_0369
Alternate gene names: NA
Gene position: 402120-401092 (Counterclockwise)
Preceding gene: 71906026
Following gene: 71906010
Centisome position: 8.93
GC content: 58.7
Gene sequence:
>1029_bases ATGGCTAGCCACAAGGAACGTTTTGCCGACAAGATGGAGTTCCCGCCGGAAATCCAGCAGCCCAACATCTACCCGCTGTC CTGGAACTCCAAGACCAAGAAGCTGCAGGAAGTCTGGGAAGCCTCGCTGCGCGAGAACTGGGATCCGGAGAAGCTGCCGT GGGACACCCTCGATGTAGACAGCTACACCTGGGAAGAGCGCGAATCGATCGCCTACTGGTGGAGCTTGCTGTCGGTGTTC GACGCATCCGCCCCCCCGGTGTTTGCCGAAGCGCTGATCAAGACCTACGAAGTGCATGAGGAAGACCCCGTTCGCAAGTG CTTCTTCTCGGTGACCCGTGACGAGCAGAACCACGAAATCATGTGTGGCCTGGCCATCACCAAGATGCTCGGCCATCCGG ACCCGATTACCTACGAACCGAAAACCGATCTCGGTCGCCGCCTGCAGAAGAACGTCAAGTGGCTGTACTTCAACGGCTCG CGCTACTGGACCGGCTACAAGCAGGCCGTACCCAAGTACGACCTGGCCGTGCTGTTCAGCTCCTTCCTGATGGGCGAAAT CGCCGCTGCCACCATCTTCAAGCAGATGTTCGACAACTCCCGCGAAGCTGTGTTCAAGGAAGGTTTCAAGAACATCGGCC GCGACGAAGGGCGTCACATGGCGATCTGTATGGCCGTCATGGAGCGCGACTATCCGGGCCTCAAGGAAGAAACCAAGGCC ATCGTCACCAAGCAGATCCGCGCCGGCTACCTGTTCCTGTCCGCCGTGCTGTTCGAACCGCCGATGGAATTCTGGGACCT GCCGGAAGACTTCATTGCCAACCAGCGTGAGGGTGAAGAAGTGGCGCGCGGCGCCGGTTTCGGCATCCCGAGCTACGAGG CCAAGCTGGAAAACTGGAAGAACGCGATGATTAACCTGAAGGGTGTGCTCGACCGCTACAACATCCCGTTCCCGGCGATT CCGGAAGTCGGCATCACCGGCCAGGAAGTCTCCGAGATCGACATGGAAGACATCATTCCGGTCTTCTAA
Upstream 100 bases:
>100_bases ATTGCACATCGATACGTATCATTATCCATCCACGCCATCCGGACACCCGGATGGATCGCTCACTCGATGAAATGACTCGT AACGAACAGGAGACAAAGAC
Downstream 100 bases:
>100_bases ACCAGACCAGCGACTGTAATTTGCTCCGGCCGGCGCCCCCACAAGGGCGCCGGCCTTGCCGCAACAGAGAAACCAATTCC ACTAGGGGAAGACAAAATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MASHKERFADKMEFPPEIQQPNIYPLSWNSKTKKLQEVWEASLRENWDPEKLPWDTLDVDSYTWEERESIAYWWSLLSVF DASAPPVFAEALIKTYEVHEEDPVRKCFFSVTRDEQNHEIMCGLAITKMLGHPDPITYEPKTDLGRRLQKNVKWLYFNGS RYWTGYKQAVPKYDLAVLFSSFLMGEIAAATIFKQMFDNSREAVFKEGFKNIGRDEGRHMAICMAVMERDYPGLKEETKA IVTKQIRAGYLFLSAVLFEPPMEFWDLPEDFIANQREGEEVARGAGFGIPSYEAKLENWKNAMINLKGVLDRYNIPFPAI PEVGITGQEVSEIDMEDIIPVF
Sequences:
>Translated_342_residues MASHKERFADKMEFPPEIQQPNIYPLSWNSKTKKLQEVWEASLRENWDPEKLPWDTLDVDSYTWEERESIAYWWSLLSVF DASAPPVFAEALIKTYEVHEEDPVRKCFFSVTRDEQNHEIMCGLAITKMLGHPDPITYEPKTDLGRRLQKNVKWLYFNGS RYWTGYKQAVPKYDLAVLFSSFLMGEIAAATIFKQMFDNSREAVFKEGFKNIGRDEGRHMAICMAVMERDYPGLKEETKA IVTKQIRAGYLFLSAVLFEPPMEFWDLPEDFIANQREGEEVARGAGFGIPSYEAKLENWKNAMINLKGVLDRYNIPFPAI PEVGITGQEVSEIDMEDIIPVF >Mature_341_residues ASHKERFADKMEFPPEIQQPNIYPLSWNSKTKKLQEVWEASLRENWDPEKLPWDTLDVDSYTWEERESIAYWWSLLSVFD ASAPPVFAEALIKTYEVHEEDPVRKCFFSVTRDEQNHEIMCGLAITKMLGHPDPITYEPKTDLGRRLQKNVKWLYFNGSR YWTGYKQAVPKYDLAVLFSSFLMGEIAAATIFKQMFDNSREAVFKEGFKNIGRDEGRHMAICMAVMERDYPGLKEETKAI VTKQIRAGYLFLSAVLFEPPMEFWDLPEDFIANQREGEEVARGAGFGIPSYEAKLENWKNAMINLKGVLDRYNIPFPAIP EVGITGQEVSEIDMEDIIPVF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39643; Mature: 39511
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASHKERFADKMEFPPEIQQPNIYPLSWNSKTKKLQEVWEASLRENWDPEKLPWDTLDVD CCCHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC SYTWEERESIAYWWSLLSVFDASAPPVFAEALIKTYEVHEEDPVRKCFFSVTRDEQNHEI CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEE MCGLAITKMLGHPDPITYEPKTDLGRRLQKNVKWLYFNGSRYWTGYKQAVPKYDLAVLFS EHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEECCCEEECCHHHHCCCHHHHHHHH SFLMGEIAAATIFKQMFDNSREAVFKEGFKNIGRDEGRHMAICMAVMERDYPGLKEETKA HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHH IVTKQIRAGYLFLSAVLFEPPMEFWDLPEDFIANQREGEEVARGAGFGIPSYEAKLENWK HHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHH NAMINLKGVLDRYNIPFPAIPEVGITGQEVSEIDMEDIIPVF HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCHHHCCCCC >Mature Secondary Structure ASHKERFADKMEFPPEIQQPNIYPLSWNSKTKKLQEVWEASLRENWDPEKLPWDTLDVD CCHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC SYTWEERESIAYWWSLLSVFDASAPPVFAEALIKTYEVHEEDPVRKCFFSVTRDEQNHEI CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCEE MCGLAITKMLGHPDPITYEPKTDLGRRLQKNVKWLYFNGSRYWTGYKQAVPKYDLAVLFS EHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEEECCCEEECCHHHHCCCHHHHHHHH SFLMGEIAAATIFKQMFDNSREAVFKEGFKNIGRDEGRHMAICMAVMERDYPGLKEETKA HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHH IVTKQIRAGYLFLSAVLFEPPMEFWDLPEDFIANQREGEEVARGAGFGIPSYEAKLENWK HHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHH NAMINLKGVLDRYNIPFPAIPEVGITGQEVSEIDMEDIIPVF HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA