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The map label for this gene is yusT [H]

Identifier: 71905999

GI number: 71905999

Start: 389521

End: 390381

Strand: Reverse

Name: yusT [H]

Synonym: Daro_0357

Alternate gene names: 71905999

Gene position: 390381-389521 (Counterclockwise)

Preceding gene: 71906005

Following gene: 71905996

Centisome position: 8.67

GC content: 65.62

Gene sequence:

>861_bases
ATGGAACTCGTCGCCCTGCGCACCTTTCAGACGGTTGTCGAAGAAGGTGGCATTCTCGCCGCCTCACGCAAGCTGAACAC
CGTGCAATCGAACGTCACCGGCCGCATCCGACGGCTGGAAGAGGAGCTCGGCACCGAACTGTTCTTCCGCAAGGGCCGCG
GGCTGGAGCTTGCCCCGTCGGGCAAGGTGCTGCTCGACTACGCGCGGCGCATGCTGATGCTCGAACGCCAGACCAGCGCC
GCCGTCCGCCAGGTCGGCGAAAGCGCCGGCGAACTGCGCATCGGTGCCATGGAAACCTTTGCCGCCCTGCATCTGCCGAG
TGCGCTGAAAGCCGTGCGTAGCGAACACCCGGGCCTTGAGCTGCGCGTCTTCACCGACACCACCAGCACGCTGATGGACA
AGGTGCTCGACCACAAGCTCGACTGCGCCTTCGTTGCCGGCCCGGTCATCCATCCCGACCTGCAGTTCGACGAACTGGTC
GTCGAAGAATTGGTCCAGGTGCATGCTGCCGGCACCGACCCGGTCCTGCTGCCGCTGATCCTCTTCCGCGAAGGCTGCGC
CTATCGGACCCGCGCCATCGCCTGGCAACGCGCCCAGGGCCACGCCGTGGCCGACGCCATGGAATTCGGCACACTGGAAG
GCATCCTCGGCTGCGTCGCCGTCGGCCTCGGCTGGACACTGATGCCCCGCCGTGTTGCAGAGCAATCCAGCCATGCCGCC
GATCTGGTCATCGAAACGGTACCGGACGAGTTCAGCCGGGTACCGACCGGCATGATCCATCTGCGCGAAGCGGCGCCGAT
GGCTGCCTTGAAAACCCTGTGCGACGGCATCACCGCCTCGGCCAATCGCATCAGGACTTGA

Upstream 100 bases:

>100_bases
TGGGATGTTCCTTTTGTTATTGATAGGCGAACAATAAACAGGGTAAAGTATCTCTACAAGTGATTTATTTAGAACACACC
ATTCGTTTTTTGAGATAGCC

Downstream 100 bases:

>100_bases
GCAGTTCTTCCCGTGAGCCCAGCCAGCGCTTGAGATGGCGTTCAGCCAGCTCGAGATGCTCGGTCAGCATCTCCTCGGCC
ACGTCACGCGCCATCTCGAC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MELVALRTFQTVVEEGGILAASRKLNTVQSNVTGRIRRLEEELGTELFFRKGRGLELAPSGKVLLDYARRMLMLERQTSA
AVRQVGESAGELRIGAMETFAALHLPSALKAVRSEHPGLELRVFTDTTSTLMDKVLDHKLDCAFVAGPVIHPDLQFDELV
VEELVQVHAAGTDPVLLPLILFREGCAYRTRAIAWQRAQGHAVADAMEFGTLEGILGCVAVGLGWTLMPRRVAEQSSHAA
DLVIETVPDEFSRVPTGMIHLREAAPMAALKTLCDGITASANRIRT

Sequences:

>Translated_286_residues
MELVALRTFQTVVEEGGILAASRKLNTVQSNVTGRIRRLEEELGTELFFRKGRGLELAPSGKVLLDYARRMLMLERQTSA
AVRQVGESAGELRIGAMETFAALHLPSALKAVRSEHPGLELRVFTDTTSTLMDKVLDHKLDCAFVAGPVIHPDLQFDELV
VEELVQVHAAGTDPVLLPLILFREGCAYRTRAIAWQRAQGHAVADAMEFGTLEGILGCVAVGLGWTLMPRRVAEQSSHAA
DLVIETVPDEFSRVPTGMIHLREAAPMAALKTLCDGITASANRIRT
>Mature_286_residues
MELVALRTFQTVVEEGGILAASRKLNTVQSNVTGRIRRLEEELGTELFFRKGRGLELAPSGKVLLDYARRMLMLERQTSA
AVRQVGESAGELRIGAMETFAALHLPSALKAVRSEHPGLELRVFTDTTSTLMDKVLDHKLDCAFVAGPVIHPDLQFDELV
VEELVQVHAAGTDPVLLPLILFREGCAYRTRAIAWQRAQGHAVADAMEFGTLEGILGCVAVGLGWTLMPRRVAEQSSHAA
DLVIETVPDEFSRVPTGMIHLREAAPMAALKTLCDGITASANRIRT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787806, Length=284, Percent_Identity=30.9859154929577, Blast_Score=138, Evalue=4e-34,
Organism=Escherichia coli, GI87082132, Length=252, Percent_Identity=27.3809523809524, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1788481, Length=284, Percent_Identity=29.9295774647887, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1790208, Length=253, Percent_Identity=30.0395256916996, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1786202, Length=144, Percent_Identity=32.6388888888889, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1787601, Length=163, Percent_Identity=26.9938650306748, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788297, Length=148, Percent_Identity=30.4054054054054, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI145693105, Length=165, Percent_Identity=27.2727272727273, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI157672245, Length=163, Percent_Identity=28.8343558282209, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1790399, Length=227, Percent_Identity=26.8722466960352, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1788887, Length=248, Percent_Identity=26.2096774193548, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 31218; Mature: 31218

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELVALRTFQTVVEEGGILAASRKLNTVQSNVTGRIRRLEEELGTELFFRKGRGLELAPS
CCEEHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCEECCC
GKVLLDYARRMLMLERQTSAAVRQVGESAGELRIGAMETFAALHLPSALKAVRSEHPGLE
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCE
LRVFTDTTSTLMDKVLDHKLDCAFVAGPVIHPDLQFDELVVEELVQVHAAGTDPVLLPLI
EEEEECCHHHHHHHHHHCCCCHHEEECCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHH
LFREGCAYRTRAIAWQRAQGHAVADAMEFGTLEGILGCVAVGLGWTLMPRRVAEQSSHAA
HHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHH
DLVIETVPDEFSRVPTGMIHLREAAPMAALKTLCDGITASANRIRT
HHHEECCCHHHHHCCHHHHHHHHHCHHHHHHHHHCCHHCCHHHCCC
>Mature Secondary Structure
MELVALRTFQTVVEEGGILAASRKLNTVQSNVTGRIRRLEEELGTELFFRKGRGLELAPS
CCEEHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCEECCC
GKVLLDYARRMLMLERQTSAAVRQVGESAGELRIGAMETFAALHLPSALKAVRSEHPGLE
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCE
LRVFTDTTSTLMDKVLDHKLDCAFVAGPVIHPDLQFDELVVEELVQVHAAGTDPVLLPLI
EEEEECCHHHHHHHHHHCCCCHHEEECCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHH
LFREGCAYRTRAIAWQRAQGHAVADAMEFGTLEGILGCVAVGLGWTLMPRRVAEQSSHAA
HHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHH
DLVIETVPDEFSRVPTGMIHLREAAPMAALKTLCDGITASANRIRT
HHHEECCCHHHHHCCHHHHHHHHHCHHHHHHHHHCCHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]