| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71906005
Identifier: 71906005
GI number: 71906005
Start: 394966
End: 395853
Strand: Reverse
Name: 71906005
Synonym: Daro_0363
Alternate gene names: NA
Gene position: 395853-394966 (Counterclockwise)
Preceding gene: 71906006
Following gene: 71905999
Centisome position: 8.79
GC content: 65.09
Gene sequence:
>888_bases ATGCTCCCTTCCCGCTCCGAATACCTCGACCTGCCCGACATCCGCCTGCACATCCGGCGCTGGGGCAATCCGAAGGCACC GACGCTGTTCCTGCTCCACGGCTGGATGGATGTTTCGGCCTCCTTCCAGTTCGTCGTCGATGAACTGCAGAAAGACTGGA ACATCATCGCCCCCGACTGGCGCGGCTTCGGCAGTTCGGAATGGCTGAACCGCCCCTATTTCTTTGCCGAACATCTCGGC GATCTCGAAGCCATCCTTGACCGCTACGCCCCCGAAGGCAAGGTCAAGCTGGTTGGCCACAGCATGGGCGGCATCCTCGC CTGCCTGTACGCCGGCATCCGTCCGGAGCGGGTGGAAAGCGTGATCTCGCTGGAAGGCTTCGGCATCGCCCCGACCACGC CGGACATGGCGACAGAGCGCTACCAGAAATGGCTCGGCGTCCTGAAAAGCCCGCCGCGCATGCATCTCTACAGCGACCGC GCCGGCTTCGCCCGCCGCCTGATGCACACGGACCGCTTCCTGACGCAGGAACGCGCCAACTTCCTGTCCCGCCACCTCGC CCGGATCGGCGATGGCGAAACCCGGAGCGGCGAACGCCGTCACGGCATCATCTGGAACGGCGACCCATGGCACAAGGCCC CCGCCCCCTACCTGTTCCGTCTGGAAGAATCGATGGCGATCTGGCGTCAGATCACCTGCCCGGTACTCTGGGTGGCCGGC CGCCAGTCCTGGGTCATCCGCGAATTCGATACCCGGCCAGGCGACTGGGCCGCCCGCCAGGCCTGCTTTGCCGACGTTCG CGAAGCATGGGTCGACAATGCCGACCACATGCTGCACCACGACCAGCCGGAAGAAGTGGCGCGCATCGTCGAGACGTTCA TCGCCTGA
Upstream 100 bases:
>100_bases GGTCGGCCAGTCACGGCCGACCCGATTCCTATCCGCAGCCGGGCCGGCATCAGGCTAGAATTCACGACAGCCCCTTTATC GCCACCGCACATCACTCGCC
Downstream 100 bases:
>100_bases CGGACCGGCCAAAACCGAAACGCTGAAATTGAAAAAGCCGGGAATCCCCGGCTTTTTCTGGTTTCGCCGAGCCAATCTGG CTCGGCAACCTGACTACGCC
Product: Alpha/beta hydrolase fold
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Hydrolase; Alpha/Beta Hydrolase; Alpha/Beta Fold Family Hydrolase; Hydrolase Protein; Hydrolase Alpha/Beta Fold Family; Hydrolase/Acyltransferase; Alpha/Beta Hydrolase Superfamily Protein; Beta-Ketoacyl Synthase; Alpha/Beta Fold Superfamily Hydrolase; Esterase; Lipase A; Hydrolases Or Acyltransferases; Hydrolase Or Acytransferase; Alpha/Beta Hydrolase Fold Family; LigA Protein; Alpha/Beta Hydrolase Family Protein; Lipase; Lipase LipA; Hydrolase Alpha/Beta Fold Family Protein; Hydrolase Or Acetyltransferase; Alpha/Beta Superfamily Hydrolase; Polyketide Synthase; Alpha/Beta Superfamily Hydrolase/Acyltransferase
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MLPSRSEYLDLPDIRLHIRRWGNPKAPTLFLLHGWMDVSASFQFVVDELQKDWNIIAPDWRGFGSSEWLNRPYFFAEHLG DLEAILDRYAPEGKVKLVGHSMGGILACLYAGIRPERVESVISLEGFGIAPTTPDMATERYQKWLGVLKSPPRMHLYSDR AGFARRLMHTDRFLTQERANFLSRHLARIGDGETRSGERRHGIIWNGDPWHKAPAPYLFRLEESMAIWRQITCPVLWVAG RQSWVIREFDTRPGDWAARQACFADVREAWVDNADHMLHHDQPEEVARIVETFIA
Sequences:
>Translated_295_residues MLPSRSEYLDLPDIRLHIRRWGNPKAPTLFLLHGWMDVSASFQFVVDELQKDWNIIAPDWRGFGSSEWLNRPYFFAEHLG DLEAILDRYAPEGKVKLVGHSMGGILACLYAGIRPERVESVISLEGFGIAPTTPDMATERYQKWLGVLKSPPRMHLYSDR AGFARRLMHTDRFLTQERANFLSRHLARIGDGETRSGERRHGIIWNGDPWHKAPAPYLFRLEESMAIWRQITCPVLWVAG RQSWVIREFDTRPGDWAARQACFADVREAWVDNADHMLHHDQPEEVARIVETFIA >Mature_295_residues MLPSRSEYLDLPDIRLHIRRWGNPKAPTLFLLHGWMDVSASFQFVVDELQKDWNIIAPDWRGFGSSEWLNRPYFFAEHLG DLEAILDRYAPEGKVKLVGHSMGGILACLYAGIRPERVESVISLEGFGIAPTTPDMATERYQKWLGVLKSPPRMHLYSDR AGFARRLMHTDRFLTQERANFLSRHLARIGDGETRSGERRHGIIWNGDPWHKAPAPYLFRLEESMAIWRQITCPVLWVAG RQSWVIREFDTRPGDWAARQACFADVREAWVDNADHMLHHDQPEEVARIVETFIA
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34129; Mature: 34129
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPSRSEYLDLPDIRLHIRRWGNPKAPTLFLLHGWMDVSASFQFVVDELQKDWNIIAPDW CCCCCCCCCCCCHHEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCEECCCC RGFGSSEWLNRPYFFAEHLGDLEAILDRYAPEGKVKLVGHSMGGILACLYAGIRPERVES CCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCHHHHHH VISLEGFGIAPTTPDMATERYQKWLGVLKSPPRMHLYSDRAGFARRLMHTDRFLTQERAN HHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHH FLSRHLARIGDGETRSGERRHGIIWNGDPWHKAPAPYLFRLEESMAIWRQITCPVLWVAG HHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEHHHHHHHHHHHHCCCEEEECC RQSWVIREFDTRPGDWAARQACFADVREAWVDNADHMLHHDQPEEVARIVETFIA CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure MLPSRSEYLDLPDIRLHIRRWGNPKAPTLFLLHGWMDVSASFQFVVDELQKDWNIIAPDW CCCCCCCCCCCCHHEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCEECCCC RGFGSSEWLNRPYFFAEHLGDLEAILDRYAPEGKVKLVGHSMGGILACLYAGIRPERVES CCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCHHHHHH VISLEGFGIAPTTPDMATERYQKWLGVLKSPPRMHLYSDRAGFARRLMHTDRFLTQERAN HHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHH FLSRHLARIGDGETRSGERRHGIIWNGDPWHKAPAPYLFRLEESMAIWRQITCPVLWVAG HHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCEEHHHHHHHHHHHHCCCEEEECC RQSWVIREFDTRPGDWAARQACFADVREAWVDNADHMLHHDQPEEVARIVETFIA CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA