| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is yvlD [H]
Identifier: 71905827
GI number: 71905827
Start: 203121
End: 203468
Strand: Reverse
Name: yvlD [H]
Synonym: Daro_0185
Alternate gene names: 71905827
Gene position: 203468-203121 (Counterclockwise)
Preceding gene: 71905828
Following gene: 71905826
Centisome position: 4.52
GC content: 57.76
Gene sequence:
>348_bases ATGCTGAACCTGCTCGCTGTCTGGATCGTCAATGCGCTAGCCCTGCTGGCGCTACCCTATGTCGTTCCGTCGGTCCAGAT AGCCGGGTTTGGCACCGCCCTGCTGGTCGCCGTCGTGCTGGGCCTGATCAACACGCTGCTCAAGCCGCTGCTGATCCTGC TCACGCTGCCGGTCACACTGCTGACGCTGGGTCTGTTCATTTTCGTGATAAATGCCCTGCTGTTCATGCTGGCCGATAAC CTGGTTGACGGCTTTCAGGTCGCTGGATTCTGGTCGGCGCTATTCGGTTCGATTGGCTACAGTCTGATTTCCTGGGCACT TAGTGTGATCTTCCTGCGCAAAAGCTAG
Upstream 100 bases:
>100_bases CGCCCAATTGTCCGAGCTGACCGACGAACAGGCCGCCTACATCAGCGTGCCGAAGGAAGGCCCGTACAAGGCCGACCACT ACCGCTACTAAGCGATCACC
Downstream 100 bases:
>100_bases GCTTCCACGATGAGCATGAACTCCTTCCACGCGCGGCAAAAAAAGCCGCGCCCAACCCCTCAGCCAGCCCACGAACGGCC GGCCGGGGTGTTGCGGGCGG
Product: membrane protein of unknown function
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 115; Mature: 115
Protein sequence:
>115_residues MLNLLAVWIVNALALLALPYVVPSVQIAGFGTALLVAVVLGLINTLLKPLLILLTLPVTLLTLGLFIFVINALLFMLADN LVDGFQVAGFWSALFGSIGYSLISWALSVIFLRKS
Sequences:
>Translated_115_residues MLNLLAVWIVNALALLALPYVVPSVQIAGFGTALLVAVVLGLINTLLKPLLILLTLPVTLLTLGLFIFVINALLFMLADN LVDGFQVAGFWSALFGSIGYSLISWALSVIFLRKS >Mature_115_residues MLNLLAVWIVNALALLALPYVVPSVQIAGFGTALLVAVVLGLINTLLKPLLILLTLPVTLLTLGLFIFVINALLFMLADN LVDGFQVAGFWSALFGSIGYSLISWALSVIFLRKS
Specific function: Unknown
COG id: COG1950
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007165 [H]
Pfam domain/function: PF04020 DUF360 [H]
EC number: NA
Molecular weight: Translated: 12327; Mature: 12327
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNLLAVWIVNALALLALPYVVPSVQIAGFGTALLVAVVLGLINTLLKPLLILLTLPVTL CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTLGLFIFVINALLFMLADNLVDGFQVAGFWSALFGSIGYSLISWALSVIFLRKS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLNLLAVWIVNALALLALPYVVPSVQIAGFGTALLVAVVLGLINTLLKPLLILLTLPVTL CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTLGLFIFVINALLFMLADNLVDGFQVAGFWSALFGSIGYSLISWALSVIFLRKS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]