| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is ahcY [H]
Identifier: 71905828
GI number: 71905828
Start: 203478
End: 204890
Strand: Reverse
Name: ahcY [H]
Synonym: Daro_0186
Alternate gene names: 71905828
Gene position: 204890-203478 (Counterclockwise)
Preceding gene: 71905829
Following gene: 71905827
Centisome position: 4.55
GC content: 61.22
Gene sequence:
>1413_bases GTGGCTGAATTCAAAGACTACGTTATCGCCGATCTTTCCCTTGCCGACTGGGGTCGCAAGGAAATCCTCATTGCCGAAAC CGAAATGCCGGGCCTGATGGCCATTCGCGAAGAGTTCGCGAAGACCCAGCCGCTCAAGGGCGCCCGCATCACCGGTTCGC TGCACATGACCATCCAGACCGCCGTGCTGATCGAGACGCTGACCGCGCTCGGCGCCGAAGTCCGCTGGGCCTCGTGCAAC ATCTTCTCGACCCAGGACCACGCAGCCGCCGCCATCGCCGCGCAGAACATCCCGGTCTTCGCCGTCAAGGGCGAAACTCT GGTCGATTACTGGGATTACACCCACCGCATCTTCGAATGGGCTGACGGCGGTTATTCGAACATGATTCTCGACGACGGCG GCGATGCCACCCTGCTGCTGCACCTCGGCGCCCGTGCCGAAAAGGACATCTCCCTGCTGGCCAAGCCGGGCTCCGAAGAA GAAACCATCCTCTTCGCCGCCATCAAGGCCAAGCTGGCCGTCGATCCGACCTGGTACTCCGTGCGCCTGGCCCAGATCAA GGGCGTCACCGAGGAAACCACCACCGGCGTGCATCGCCTGTACCAGATGCATCAGCGTGGCGAGCTCAAGTTCCCGGGCA TCAACGTTAACGATTCCGTCACCAAGTCCAAATTCGACAACCTTTACGGCTGCCGCGAATCGCTGGTCGATGGCATTAAG CGCGCCACCGACGTGATGATCGCCGGCAAGGTTGCCGTCATCGCCGGTTACGGCGACGTGGGCAAGGGTTCGGCCCAAGC CATGCGCGCCCTGTCGGCACAAGTCTGGGTCACCGAAATCGACCCGATCTGCGCCCTGCAGGCCGCGATGGAAGGCTATC GCGTCGTCACCATGGAATACGCCGCCGACAAGGCCGACATCTTCGTCACCACGACCGGCAACTTCCACGTCATCACCCAT GACCACATGGCTGCGATGAAGAACAACGCCATCGTCTGCAACATCGGTCACTTCGACAACGAAATCGACGTCGCCTCGAT CGAGAAGTACCAGTGGGAAGAGATCAAGCCGCAAGTCGATCACGTCATCTTCCCGGACGGCAAGCGCATCATCCTGCTCG CCAAGGGCCGTCTGGTGAACCTCGGCTGCGGCACGGGCCACCCGTCCTACGTGATGTCGTCGTCCTTCGCCAACCAGACC ATCGCCCAGATCGAGCTGTGGACGGAGGCAGTCAAGGGTTCCAACAAGTACCCGGTCGGCGTCTACACGCTTCCCAAGCA CCTGGACGAAAAGGTAGCCCGTCTGCAACTGAAGACGCTGAACGCCCAATTGTCCGAGCTGACCGACGAACAGGCCGCCT ACATCAGCGTGCCGAAGGAAGGCCCGTACAAGGCCGACCACTACCGCTACTAA
Upstream 100 bases:
>100_bases AAAACGGCGCTCACTGATCAACCCTGCCGGGCGCAGGGGGCCGCCGGTGAGCAACAACGCCGTTATTCCCCTCCCCGTCA CAGTTATTTAGGAGCTTACT
Downstream 100 bases:
>100_bases GCGATCACCATGCTGAACCTGCTCGCTGTCTGGATCGTCAATGCGCTAGCCCTGCTGGCGCTACCCTATGTCGTTCCGTC GGTCCAGATAGCCGGGTTTG
Product: S-adenosyl-L-homocysteine hydrolase
Products: NA
Alternate protein names: S-adenosyl-L-homocysteine hydrolase; AdoHcyase [H]
Number of amino acids: Translated: 470; Mature: 469
Protein sequence:
>470_residues MAEFKDYVIADLSLADWGRKEILIAETEMPGLMAIREEFAKTQPLKGARITGSLHMTIQTAVLIETLTALGAEVRWASCN IFSTQDHAAAAIAAQNIPVFAVKGETLVDYWDYTHRIFEWADGGYSNMILDDGGDATLLLHLGARAEKDISLLAKPGSEE ETILFAAIKAKLAVDPTWYSVRLAQIKGVTEETTTGVHRLYQMHQRGELKFPGINVNDSVTKSKFDNLYGCRESLVDGIK RATDVMIAGKVAVIAGYGDVGKGSAQAMRALSAQVWVTEIDPICALQAAMEGYRVVTMEYAADKADIFVTTTGNFHVITH DHMAAMKNNAIVCNIGHFDNEIDVASIEKYQWEEIKPQVDHVIFPDGKRIILLAKGRLVNLGCGTGHPSYVMSSSFANQT IAQIELWTEAVKGSNKYPVGVYTLPKHLDEKVARLQLKTLNAQLSELTDEQAAYISVPKEGPYKADHYRY
Sequences:
>Translated_470_residues MAEFKDYVIADLSLADWGRKEILIAETEMPGLMAIREEFAKTQPLKGARITGSLHMTIQTAVLIETLTALGAEVRWASCN IFSTQDHAAAAIAAQNIPVFAVKGETLVDYWDYTHRIFEWADGGYSNMILDDGGDATLLLHLGARAEKDISLLAKPGSEE ETILFAAIKAKLAVDPTWYSVRLAQIKGVTEETTTGVHRLYQMHQRGELKFPGINVNDSVTKSKFDNLYGCRESLVDGIK RATDVMIAGKVAVIAGYGDVGKGSAQAMRALSAQVWVTEIDPICALQAAMEGYRVVTMEYAADKADIFVTTTGNFHVITH DHMAAMKNNAIVCNIGHFDNEIDVASIEKYQWEEIKPQVDHVIFPDGKRIILLAKGRLVNLGCGTGHPSYVMSSSFANQT IAQIELWTEAVKGSNKYPVGVYTLPKHLDEKVARLQLKTLNAQLSELTDEQAAYISVPKEGPYKADHYRY >Mature_469_residues AEFKDYVIADLSLADWGRKEILIAETEMPGLMAIREEFAKTQPLKGARITGSLHMTIQTAVLIETLTALGAEVRWASCNI FSTQDHAAAAIAAQNIPVFAVKGETLVDYWDYTHRIFEWADGGYSNMILDDGGDATLLLHLGARAEKDISLLAKPGSEEE TILFAAIKAKLAVDPTWYSVRLAQIKGVTEETTTGVHRLYQMHQRGELKFPGINVNDSVTKSKFDNLYGCRESLVDGIKR ATDVMIAGKVAVIAGYGDVGKGSAQAMRALSAQVWVTEIDPICALQAAMEGYRVVTMEYAADKADIFVTTTGNFHVITHD HMAAMKNNAIVCNIGHFDNEIDVASIEKYQWEEIKPQVDHVIFPDGKRIILLAKGRLVNLGCGTGHPSYVMSSSFANQTI AQIELWTEAVKGSNKYPVGVYTLPKHLDEKVARLQLKTLNAQLSELTDEQAAYISVPKEGPYKADHYRY
Specific function: May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine [H]
COG id: COG0499
COG function: function code H; S-adenosylhomocysteine hydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosylhomocysteinase family [H]
Homologues:
Organism=Homo sapiens, GI9951915, Length=472, Percent_Identity=58.2627118644068, Blast_Score=518, Evalue=1e-147, Organism=Homo sapiens, GI239937451, Length=444, Percent_Identity=58.7837837837838, Blast_Score=492, Evalue=1e-139, Organism=Homo sapiens, GI298286489, Length=467, Percent_Identity=48.8222698072805, Blast_Score=450, Evalue=1e-126, Organism=Homo sapiens, GI195539337, Length=467, Percent_Identity=48.8222698072805, Blast_Score=450, Evalue=1e-126, Organism=Homo sapiens, GI24308043, Length=467, Percent_Identity=48.8222698072805, Blast_Score=450, Evalue=1e-126, Organism=Homo sapiens, GI195539349, Length=467, Percent_Identity=48.8222698072805, Blast_Score=449, Evalue=1e-126, Organism=Homo sapiens, GI21361647, Length=467, Percent_Identity=47.3233404710921, Blast_Score=429, Evalue=1e-120, Organism=Caenorhabditis elegans, GI17506425, Length=473, Percent_Identity=58.7737843551797, Blast_Score=534, Evalue=1e-152, Organism=Saccharomyces cerevisiae, GI6320882, Length=482, Percent_Identity=57.2614107883817, Blast_Score=508, Evalue=1e-144, Organism=Drosophila melanogaster, GI24642172, Length=466, Percent_Identity=58.7982832618026, Blast_Score=519, Evalue=1e-147, Organism=Drosophila melanogaster, GI24656245, Length=456, Percent_Identity=49.1228070175439, Blast_Score=439, Evalue=1e-123, Organism=Drosophila melanogaster, GI45553387, Length=467, Percent_Identity=47.7516059957173, Blast_Score=421, Evalue=1e-118, Organism=Drosophila melanogaster, GI45553385, Length=466, Percent_Identity=47.6394849785408, Blast_Score=419, Evalue=1e-117,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000043 - InterPro: IPR015878 - InterPro: IPR020082 [H]
Pfam domain/function: PF05221 AdoHcyase; PF00670 AdoHcyase_NAD [H]
EC number: =3.3.1.1 [H]
Molecular weight: Translated: 51790; Mature: 51659
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: PS00738 ADOHCYASE_1 ; PS00739 ADOHCYASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEFKDYVIADLSLADWGRKEILIAETEMPGLMAIREEFAKTQPLKGARITGSLHMTIQT CCCCCCEEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEEEEEEEHH AVLIETLTALGAEVRWASCNIFSTQDHAAAAIAAQNIPVFAVKGETLVDYWDYTHRIFEW HHHHHHHHHCCCEEEEEEEEEECCCCCHHEEEEECCCEEEEEECCEEEEHHHHHHHHHHH ADGGYSNMILDDGGDATLLLHLGARAEKDISLLAKPGSEEETILFAAIKAKLAVDPTWYS CCCCCCEEEEECCCCEEEEEEECCCCCCCEEEEECCCCCCCEEEEEEEEEEEEECCCEEE VRLAQIKGVTEETTTGVHRLYQMHQRGELKFPGINVNDSVTKSKFDNLYGCRESLVDGIK EEEEECCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH RATDVMIAGKVAVIAGYGDVGKGSAQAMRALSAQVWVTEIDPICALQAAMEGYRVVTMEY HHHHEEEECCEEEEEECCCCCCCHHHHHHHHHHEEEEEECCHHHHHHHHHCCEEEEEEEE AADKADIFVTTTGNFHVITHDHMAAMKNNAIVCNIGHFDNEIDVASIEKYQWEEIKPQVD CCCCCCEEEEECCCEEEEECCHHHHHCCCEEEEEECCCCCCCCEECCCCCCHHHCCCCCC HVIFPDGKRIILLAKGRLVNLGCGTGHPSYVMSSSFANQTIAQIELWTEAVKGSNKYPVG EEECCCCCEEEEEECCCEEEEECCCCCCCHHHCCHHCCCHHHHHHHHHHHHCCCCCCCEE VYTLPKHLDEKVARLQLKTLNAQLSELTDEQAAYISVPKEGPYKADHYRY EEECHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCC >Mature Secondary Structure AEFKDYVIADLSLADWGRKEILIAETEMPGLMAIREEFAKTQPLKGARITGSLHMTIQT CCCCCEEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEEEEEEEHH AVLIETLTALGAEVRWASCNIFSTQDHAAAAIAAQNIPVFAVKGETLVDYWDYTHRIFEW HHHHHHHHHCCCEEEEEEEEEECCCCCHHEEEEECCCEEEEEECCEEEEHHHHHHHHHHH ADGGYSNMILDDGGDATLLLHLGARAEKDISLLAKPGSEEETILFAAIKAKLAVDPTWYS CCCCCCEEEEECCCCEEEEEEECCCCCCCEEEEECCCCCCCEEEEEEEEEEEEECCCEEE VRLAQIKGVTEETTTGVHRLYQMHQRGELKFPGINVNDSVTKSKFDNLYGCRESLVDGIK EEEEECCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH RATDVMIAGKVAVIAGYGDVGKGSAQAMRALSAQVWVTEIDPICALQAAMEGYRVVTMEY HHHHEEEECCEEEEEECCCCCCCHHHHHHHHHHEEEEEECCHHHHHHHHHCCEEEEEEEE AADKADIFVTTTGNFHVITHDHMAAMKNNAIVCNIGHFDNEIDVASIEKYQWEEIKPQVD CCCCCCEEEEECCCEEEEECCHHHHHCCCEEEEEECCCCCCCCEECCCCCCHHHCCCCCC HVIFPDGKRIILLAKGRLVNLGCGTGHPSYVMSSSFANQTIAQIELWTEAVKGSNKYPVG EEECCCCCEEEEEECCCEEEEECCCCCCCHHHCCHHCCCHHHHHHHHHHHHCCCCCCCEE VYTLPKHLDEKVARLQLKTLNAQLSELTDEQAAYISVPKEGPYKADHYRY EEECHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA