| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71905817
Identifier: 71905817
GI number: 71905817
Start: 191599
End: 192675
Strand: Reverse
Name: 71905817
Synonym: Daro_0175
Alternate gene names: NA
Gene position: 192675-191599 (Counterclockwise)
Preceding gene: 71905818
Following gene: 71905816
Centisome position: 4.28
GC content: 61.84
Gene sequence:
>1077_bases ATGCATCTATTCGTCGACATTTCCAGCCACGGCTTCGGGCACCTCGCCATCACGGCGCCGGTGCTCAACGCCCTGGCGGA AATCGCTCCGAATTTCCGGCTGACCATCAGAAGCGCGCTGCCTCCAGCCAAACTGCAGCAGCGGATCAAGCCACCCTATA TGCTGATCGCCGAAGCCAGCGATTTTGGCTATGCCATGATCGATGCCACCCGCGTTGATCTGGCGGCCAGCGCTTCCGCC TATCGCCTGGCGCACGACAACTGGGCAAGCCGCGTCACCCAGGAAGCCCGCTTTCTGGCCGGCCTCAAGCCTGACCTGGT GCTCACCAACGTCAGCTACCTGCCACTGGCCGGCGCGGCGGCGGCAGGCATTCCGGCCATCAGCCTGTGCTCACTGAACT GGGCGGACCTGTTTGATCACTTCTTCGGCAACCAGACCTGGGCCCGGCCCATTCACTCAGAAATCCTCGCCGCCTACCGC TCGGCACAGGCCTTTCTACGGGTCACGCCGGGCATGGCGATGGGTGCGCTGGGCAATGTCCAGCTGGTCGGCCCGATCGC TGCCCTTGGTACGCAACACGATCTTGGCCTGAATGGCGACAAAGCCATTCTGATCGCCATGGGCGGCATCGCCCACCGCC TGCCAGTAGAAAACTGGCCCCGGCTACCTGGCGTGCGCTGGTTGACTCCCGCCAATTGGAACTGCCAGCATCCCGATGCC ATTGCCAACGAATCCTTTGGCCTCAGCTTCACCGATCTGCTGTGCTCCGTCGATGCGATTATCACCAAGCCCGGCTACGG CACCTTTACCGAAGCCGCCTGCAACGGCACGCCGGTCATCTACCAGCGGCGCGAAGACTGGCCGGAGCAGGATTGCCTGA TCGAATGGCTGACAGGCAACGCCCGTTGCCTTGAGATCAACGCGGAAGCACTGGAACGCGGGAGGCTTGCCGATGTCATT AAAGACGTTCTGCCCCCAAAGCCATCCGCCGTTCCGGTAGCGGACGGCATTATCCAGGCGGCAAAAGCCATCATTCACCA CGCCAGTGCACAAATCTTTGCCTTAAAAGGCGCCTAA
Upstream 100 bases:
>100_bases CGCCCTCGAGGACCAGAAGGAAGGCATGGCTGCCTTTGTCGAGAAGCGCAAGCCCGTATTCAAGAACCGCTGAGATCAGC CTTCCCAAGAAATCCGGCCG
Downstream 100 bases:
>100_bases ACACCCCATTTTTCGCGGGATTTGGCACAATTCGGCATGCTCGAAACCAGCCCCCCGTCCTGCCCGACCAGCCGCCTGTG CGGCCCGGAATCCCCTGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MHLFVDISSHGFGHLAITAPVLNALAEIAPNFRLTIRSALPPAKLQQRIKPPYMLIAEASDFGYAMIDATRVDLAASASA YRLAHDNWASRVTQEARFLAGLKPDLVLTNVSYLPLAGAAAAGIPAISLCSLNWADLFDHFFGNQTWARPIHSEILAAYR SAQAFLRVTPGMAMGALGNVQLVGPIAALGTQHDLGLNGDKAILIAMGGIAHRLPVENWPRLPGVRWLTPANWNCQHPDA IANESFGLSFTDLLCSVDAIITKPGYGTFTEAACNGTPVIYQRREDWPEQDCLIEWLTGNARCLEINAEALERGRLADVI KDVLPPKPSAVPVADGIIQAAKAIIHHASAQIFALKGA
Sequences:
>Translated_358_residues MHLFVDISSHGFGHLAITAPVLNALAEIAPNFRLTIRSALPPAKLQQRIKPPYMLIAEASDFGYAMIDATRVDLAASASA YRLAHDNWASRVTQEARFLAGLKPDLVLTNVSYLPLAGAAAAGIPAISLCSLNWADLFDHFFGNQTWARPIHSEILAAYR SAQAFLRVTPGMAMGALGNVQLVGPIAALGTQHDLGLNGDKAILIAMGGIAHRLPVENWPRLPGVRWLTPANWNCQHPDA IANESFGLSFTDLLCSVDAIITKPGYGTFTEAACNGTPVIYQRREDWPEQDCLIEWLTGNARCLEINAEALERGRLADVI KDVLPPKPSAVPVADGIIQAAKAIIHHASAQIFALKGA >Mature_358_residues MHLFVDISSHGFGHLAITAPVLNALAEIAPNFRLTIRSALPPAKLQQRIKPPYMLIAEASDFGYAMIDATRVDLAASASA YRLAHDNWASRVTQEARFLAGLKPDLVLTNVSYLPLAGAAAAGIPAISLCSLNWADLFDHFFGNQTWARPIHSEILAAYR SAQAFLRVTPGMAMGALGNVQLVGPIAALGTQHDLGLNGDKAILIAMGGIAHRLPVENWPRLPGVRWLTPANWNCQHPDA IANESFGLSFTDLLCSVDAIITKPGYGTFTEAACNGTPVIYQRREDWPEQDCLIEWLTGNARCLEINAEALERGRLADVI KDVLPPKPSAVPVADGIIQAAKAIIHHASAQIFALKGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38515; Mature: 38515
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLFVDISSHGFGHLAITAPVLNALAEIAPNFRLTIRSALPPAKLQQRIKPPYMLIAEAS CEEEEEECCCCCCEEEEHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCEEEEEECC DFGYAMIDATRVDLAASASAYRLAHDNWASRVTQEARFLAGLKPDLVLTNVSYLPLAGAA CCCEEEEEEHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHH AAGIPAISLCSLNWADLFDHFFGNQTWARPIHSEILAAYRSAQAFLRVTPGMAMGALGNV HCCCCEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEECCCHHHCCCCCE QLVGPIAALGTQHDLGLNGDKAILIAMGGIAHRLPVENWPRLPGVRWLTPANWNCQHPDA EEEEHHHHHCCCCCCCCCCCCEEEEEECCHHHHCCCCCCCCCCCEEEECCCCCCCCCCCC IANESFGLSFTDLLCSVDAIITKPGYGTFTEAACNGTPVIYQRREDWPEQDCLIEWLTGN CCCCCCCCHHHHHHHHHHHHEECCCCCCCHHHCCCCCCEEEECCCCCCCHHHHHHEECCC ARCLEINAEALERGRLADVIKDVLPPKPSAVPVADGIIQAAKAIIHHASAQIFALKGA EEEEEECHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECC >Mature Secondary Structure MHLFVDISSHGFGHLAITAPVLNALAEIAPNFRLTIRSALPPAKLQQRIKPPYMLIAEAS CEEEEEECCCCCCEEEEHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCEEEEEECC DFGYAMIDATRVDLAASASAYRLAHDNWASRVTQEARFLAGLKPDLVLTNVSYLPLAGAA CCCEEEEEEHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHH AAGIPAISLCSLNWADLFDHFFGNQTWARPIHSEILAAYRSAQAFLRVTPGMAMGALGNV HCCCCEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEECCCHHHCCCCCE QLVGPIAALGTQHDLGLNGDKAILIAMGGIAHRLPVENWPRLPGVRWLTPANWNCQHPDA EEEEHHHHHCCCCCCCCCCCCEEEEEECCHHHHCCCCCCCCCCCEEEECCCCCCCCCCCC IANESFGLSFTDLLCSVDAIITKPGYGTFTEAACNGTPVIYQRREDWPEQDCLIEWLTGN CCCCCCCCHHHHHHHHHHHHEECCCCCCCHHHCCCCCCEEEECCCCCCCHHHHHHEECCC ARCLEINAEALERGRLADVIKDVLPPKPSAVPVADGIIQAAKAIIHHASAQIFALKGA EEEEEECHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA