Definition Dechloromonas aromatica RCB, complete genome.
Accession NC_007298
Length 4,501,104

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The map label for this gene is bluB [H]

Identifier: 71905783

GI number: 71905783

Start: 154800

End: 155774

Strand: Reverse

Name: bluB [H]

Synonym: Daro_0141

Alternate gene names: 71905783

Gene position: 155774-154800 (Counterclockwise)

Preceding gene: 71905784

Following gene: 71905782

Centisome position: 3.46

GC content: 62.36

Gene sequence:

>975_bases
ATGTCTCTCGGTGCCCGGCCGATTTATCGGCGGGAGAATCGGGAAGGCGGTGCAAATCCGCCGCGTGCCCAACGCTGTAA
GGAGGACGGGCGATGCGAAAAGCCACTGGTCAGGGAAAACCCGGCCGGGAAGGCGCATCGGCCGGGTGAATCCGAGTCAG
AAGACCGGCCGGGAGACGAAACCGGGCTGCATGGACAAGCAGTCATCGTTTTTCCACAAGGGGAATTCATGGAAAACCAG
ATTGACCATTCGTTTTCGGACGCCGAGCGCGCCGCCATCTATCGCACCATTTTCAATCGCCGCGACGTGCGCGGCCAGTT
CCTGCCGGATCCGGTGCCGGACGAGGTGCTCAGCCGCGTACTGATGGCCGCCCACCATGCGCCATCGGTCGGTTTCATGC
AACCGTGGAACTTTCTGCTCGTCCGCTCGCCCGAGGTCAAGCAGCGGGTCCGCGACATCTTCGCCAAGGCGCATGCGGAA
GCCGCGATGATGTTCCCGGAGGGCAAGCGGGAAACCTACAACCAGCTCAAGCTCGAAGGCATCGTCGAATCGCCGATTAA
CCTGTGCATCACCTGCGACCGCGAACGGACCGGCCCGGTCGTCGTCGGCCGCACCCATATCAAGACGATGGACCTCTACT
CCAGCGTCTGCGCCGTGCAAAACCTGTGGCTGGCCGCCCGCGCCGAAGGACTGGGCGTCGGCTGGGTCAGCATTTTCAAC
CAGCCGGAACTGCAGGCAGCGCTTGGTATCCCGAGCGAGATCGTGCCCATTGCCTACCTGTGCATCGGTTACGTCAGCCA
TTTCCACGACAAGCCGGAACTGGAAAAGACCGGCTGGCTGCCCCGCCTGCCGATTGCCGATCTGCTCTACTACGACCAGT
GGGGCCAGGCCGATGTCGCCCGGAATGAGTCGCTGACCAACACGCTCGCCACCATGCAGGACGATATCCAGCAACGGGGC
ATCTTCCCGAAATGA

Upstream 100 bases:

>100_bases
GACGATAGGCGAATGAACGGCAGCGGCACTTTCATTGGGAAAGCAGCTCGCTTCTCCATGACTTGCCTGCCAGCCTAGGG
TCGCTTAGCATCCGGCCTTT

Downstream 100 bases:

>100_bases
TGATGCCCGAGGGTGCCCTTGCCATGCCGGCCGCCGCCCTGGTCGCCGTGCTGCTCGACCGCCTGCTCGGCGAAGTGCGC
CGTTTCCATCCGCTCGTTGG

Product: cob(II)yrinic acid a,c-diamide reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MSLGARPIYRRENREGGANPPRAQRCKEDGRCEKPLVRENPAGKAHRPGESESEDRPGDETGLHGQAVIVFPQGEFMENQ
IDHSFSDAERAAIYRTIFNRRDVRGQFLPDPVPDEVLSRVLMAAHHAPSVGFMQPWNFLLVRSPEVKQRVRDIFAKAHAE
AAMMFPEGKRETYNQLKLEGIVESPINLCITCDRERTGPVVVGRTHIKTMDLYSSVCAVQNLWLAARAEGLGVGWVSIFN
QPELQAALGIPSEIVPIAYLCIGYVSHFHDKPELEKTGWLPRLPIADLLYYDQWGQADVARNESLTNTLATMQDDIQQRG
IFPK

Sequences:

>Translated_324_residues
MSLGARPIYRRENREGGANPPRAQRCKEDGRCEKPLVRENPAGKAHRPGESESEDRPGDETGLHGQAVIVFPQGEFMENQ
IDHSFSDAERAAIYRTIFNRRDVRGQFLPDPVPDEVLSRVLMAAHHAPSVGFMQPWNFLLVRSPEVKQRVRDIFAKAHAE
AAMMFPEGKRETYNQLKLEGIVESPINLCITCDRERTGPVVVGRTHIKTMDLYSSVCAVQNLWLAARAEGLGVGWVSIFN
QPELQAALGIPSEIVPIAYLCIGYVSHFHDKPELEKTGWLPRLPIADLLYYDQWGQADVARNESLTNTLATMQDDIQQRG
IFPK
>Mature_323_residues
SLGARPIYRRENREGGANPPRAQRCKEDGRCEKPLVRENPAGKAHRPGESESEDRPGDETGLHGQAVIVFPQGEFMENQI
DHSFSDAERAAIYRTIFNRRDVRGQFLPDPVPDEVLSRVLMAAHHAPSVGFMQPWNFLLVRSPEVKQRVRDIFAKAHAEA
AMMFPEGKRETYNQLKLEGIVESPINLCITCDRERTGPVVVGRTHIKTMDLYSSVCAVQNLWLAARAEGLGVGWVSIFNQ
PELQAALGIPSEIVPIAYLCIGYVSHFHDKPELEKTGWLPRLPIADLLYYDQWGQADVARNESLTNTLATMQDDIQQRGI
FPK

Specific function: Maybe catalyzes the reduction of Co(2+) to Co(+) in cob(II)yrinic acid A,C-diamide to allow adenosylation to procede [H]

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012825
- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: =1.16.8.1 [H]

Molecular weight: Translated: 36439; Mature: 36308

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLGARPIYRRENREGGANPPRAQRCKEDGRCEKPLVRENPAGKAHRPGESESEDRPGDE
CCCCCCCCHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TGLHGQAVIVFPQGEFMENQIDHSFSDAERAAIYRTIFNRRDVRGQFLPDPVPDEVLSRV
CCCCCCEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
LMAAHHAPSVGFMQPWNFLLVRSPEVKQRVRDIFAKAHAEAAMMFPEGKRETYNQLKLEG
HHHHHCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHH
IVESPINLCITCDRERTGPVVVGRTHIKTMDLYSSVCAVQNLWLAARAEGLGVGWVSIFN
HHHCCCEEEEEECCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCC
QPELQAALGIPSEIVPIAYLCIGYVSHFHDKPELEKTGWLPRLPIADLLYYDQWGQADVA
CCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHCCCCCCHHH
RNESLTNTLATMQDDIQQRGIFPK
CCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SLGARPIYRRENREGGANPPRAQRCKEDGRCEKPLVRENPAGKAHRPGESESEDRPGDE
CCCCCCCHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TGLHGQAVIVFPQGEFMENQIDHSFSDAERAAIYRTIFNRRDVRGQFLPDPVPDEVLSRV
CCCCCCEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
LMAAHHAPSVGFMQPWNFLLVRSPEVKQRVRDIFAKAHAEAAMMFPEGKRETYNQLKLEG
HHHHHCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHH
IVESPINLCITCDRERTGPVVVGRTHIKTMDLYSSVCAVQNLWLAARAEGLGVGWVSIFN
HHHCCCEEEEEECCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCC
QPELQAALGIPSEIVPIAYLCIGYVSHFHDKPELEKTGWLPRLPIADLLYYDQWGQADVA
CCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCHHHHHHHCCCCCCHHH
RNESLTNTLATMQDDIQQRGIFPK
CCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7635831; 9256491 [H]