| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71905784
Identifier: 71905784
GI number: 71905784
Start: 155859
End: 156848
Strand: Reverse
Name: 71905784
Synonym: Daro_0142
Alternate gene names: NA
Gene position: 156848-155859 (Counterclockwise)
Preceding gene: 71905785
Following gene: 71905783
Centisome position: 3.48
GC content: 61.01
Gene sequence:
>990_bases ATGAACCCACAAAACGGCCTGCTGACCATCACCGAAGCCAGCGCCCTGATCGAAAGCGGCCATTTCATGAGCATTGCCGG CGATGAAACAGCGCTGCGACAACTGCCACCCGGACACTGGATCGGCGGCACCATCCCCTACTTCATTGGCAGCGAAGGTG GCATCACCACCAAGGATCGCGTTTACGTCCAGCTGATCGAATGCTTTGCCCAGCCACCCCGCCTGTCTTTGCGCGCCACA GATGAGCTACCAGCGATCTGCCACGAGGCGCCCGACAACGGCTACACTTTGCTGATCATCCCGGCCTTCAGCGAGGCCCA CCGCCTGTTTGCGGAAAATGCGCCAAACTACGAAGAGATGTACATGAAGCCGCTGGTCGGCTGGATTGCCGGCGTCCATC TGGCCGAACTCGGCACCCGCAAGCCCTTGGTCGTGCTGGGCGAAACCCTGGAGTTTTCCGACGACAAGGCGGCAGTCATC GATGTCGCCCTGCCGGACCATCGCTATGCTCAGGTCGAGATCGTGAATCCGTTCCGGGCGGCGCCCACGCCGATCCTCCG CTTCCCGACGTCAGGATTTTCGGCCGGCGCCTGCGAAATCGACGGCCAAGCCCGGAATTTTGCCGAATACCTGGTCAGCC ATCAGCTCGATAGCCGTCTGCCGCTGGTGGCCGACTACTGCGGCGCCCTGATCAACGTCAGCATCCGCAACATCGATCTT GAAAACGGGCAGGTGGACTTCTACGCACCGGTGTTTGCCGGCACCGAATACCGGATGGCCAGCCCACTGACCGACTACGT CCAGACCTTTGCCGCCGCCCTACCCGGCGGCCTTGGCCAACCGGAATTTGCCTGCAACTGCGTGCTCAATTTCCTGTACT CGGAACTGGAGGGCAAGCAGGCCGGTGCGATCGGCGGCCCGATGACGTTTGGCGAAATTGGCTATCAACTGCTCAACCAG ACCATGGCGCTTCTGACGATAGGCGAATGA
Upstream 100 bases:
>100_bases CGCTGAAAGCCCATGAACTGCAGCGCTACTTCGTCCGCCATGCCCATCTGCTGGCTCACGAACTCGAACAAATCAACCGA ATCTGACCAGGAGCCCATCA
Downstream 100 bases:
>100_bases ACGGCAGCGGCACTTTCATTGGGAAAGCAGCTCGCTTCTCCATGACTTGCCTGCCAGCCTAGGGTCGCTTAGCATCCGGC CTTTATGTCTCTCGGTGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MNPQNGLLTITEASALIESGHFMSIAGDETALRQLPPGHWIGGTIPYFIGSEGGITTKDRVYVQLIECFAQPPRLSLRAT DELPAICHEAPDNGYTLLIIPAFSEAHRLFAENAPNYEEMYMKPLVGWIAGVHLAELGTRKPLVVLGETLEFSDDKAAVI DVALPDHRYAQVEIVNPFRAAPTPILRFPTSGFSAGACEIDGQARNFAEYLVSHQLDSRLPLVADYCGALINVSIRNIDL ENGQVDFYAPVFAGTEYRMASPLTDYVQTFAAALPGGLGQPEFACNCVLNFLYSELEGKQAGAIGGPMTFGEIGYQLLNQ TMALLTIGE
Sequences:
>Translated_329_residues MNPQNGLLTITEASALIESGHFMSIAGDETALRQLPPGHWIGGTIPYFIGSEGGITTKDRVYVQLIECFAQPPRLSLRAT DELPAICHEAPDNGYTLLIIPAFSEAHRLFAENAPNYEEMYMKPLVGWIAGVHLAELGTRKPLVVLGETLEFSDDKAAVI DVALPDHRYAQVEIVNPFRAAPTPILRFPTSGFSAGACEIDGQARNFAEYLVSHQLDSRLPLVADYCGALINVSIRNIDL ENGQVDFYAPVFAGTEYRMASPLTDYVQTFAAALPGGLGQPEFACNCVLNFLYSELEGKQAGAIGGPMTFGEIGYQLLNQ TMALLTIGE >Mature_329_residues MNPQNGLLTITEASALIESGHFMSIAGDETALRQLPPGHWIGGTIPYFIGSEGGITTKDRVYVQLIECFAQPPRLSLRAT DELPAICHEAPDNGYTLLIIPAFSEAHRLFAENAPNYEEMYMKPLVGWIAGVHLAELGTRKPLVVLGETLEFSDDKAAVI DVALPDHRYAQVEIVNPFRAAPTPILRFPTSGFSAGACEIDGQARNFAEYLVSHQLDSRLPLVADYCGALINVSIRNIDL ENGQVDFYAPVFAGTEYRMASPLTDYVQTFAAALPGGLGQPEFACNCVLNFLYSELEGKQAGAIGGPMTFGEIGYQLLNQ TMALLTIGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35686; Mature: 35686
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPQNGLLTITEASALIESGHFMSIAGDETALRQLPPGHWIGGTIPYFIGSEGGITTKDR CCCCCCEEEEEEHHHHHHCCCEEEECCCHHHHHHCCCCCCCCCCCCEEECCCCCCCCHHH VYVQLIECFAQPPRLSLRATDELPAICHEAPDNGYTLLIIPAFSEAHRLFAENAPNYEEM HHHHHHHHHCCCCCEEEEECCCCCHHHHCCCCCCEEEEEEECCHHHHHHHHCCCCCHHHH YMKPLVGWIAGVHLAELGTRKPLVVLGETLEFSDDKAAVIDVALPDHRYAQVEIVNPFRA HHHHHHHHHHHHHHHHHCCCCCEEEEECCEECCCCCEEEEEEECCCCCEEEEEEECCCCC APTPILRFPTSGFSAGACEIDGQARNFAEYLVSHQLDSRLPLVADYCGALINVSIRNIDL CCCCEEECCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHEEEEEEEEEC ENGQVDFYAPVFAGTEYRMASPLTDYVQTFAAALPGGLGQPEFACNCVLNFLYSELEGKQ CCCCEEEEEHEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC AGAIGGPMTFGEIGYQLLNQTMALLTIGE CCCCCCCCCHHHHHHHHHHHHEEEEEECC >Mature Secondary Structure MNPQNGLLTITEASALIESGHFMSIAGDETALRQLPPGHWIGGTIPYFIGSEGGITTKDR CCCCCCEEEEEEHHHHHHCCCEEEECCCHHHHHHCCCCCCCCCCCCEEECCCCCCCCHHH VYVQLIECFAQPPRLSLRATDELPAICHEAPDNGYTLLIIPAFSEAHRLFAENAPNYEEM HHHHHHHHHCCCCCEEEEECCCCCHHHHCCCCCCEEEEEEECCHHHHHHHHCCCCCHHHH YMKPLVGWIAGVHLAELGTRKPLVVLGETLEFSDDKAAVIDVALPDHRYAQVEIVNPFRA HHHHHHHHHHHHHHHHHCCCCCEEEEECCEECCCCCEEEEEEECCCCCEEEEEEECCCCC APTPILRFPTSGFSAGACEIDGQARNFAEYLVSHQLDSRLPLVADYCGALINVSIRNIDL CCCCEEECCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHEEEEEEEEEC ENGQVDFYAPVFAGTEYRMASPLTDYVQTFAAALPGGLGQPEFACNCVLNFLYSELEGKQ CCCCEEEEEHEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC AGAIGGPMTFGEIGYQLLNQTMALLTIGE CCCCCCCCCHHHHHHHHHHHHEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA