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The map label for this gene is yhbV [H]

Identifier: 71905750

GI number: 71905750

Start: 124357

End: 125259

Strand: Reverse

Name: yhbV [H]

Synonym: Daro_0108

Alternate gene names: 71905750

Gene position: 125259-124357 (Counterclockwise)

Preceding gene: 71905751

Following gene: 71905749

Centisome position: 2.78

GC content: 60.8

Gene sequence:

>903_bases
ATGAAACTTTCGCTTGGCCCCCTGCTCTATTTCTGGCCCAAGGGCGAGGTCATGGAGTTCTACGCCGAGATGGCTCAGAA
CCCCGCGCTCGACATCATCTACGTTGGCGAAGTGGTCTGCTCGCGTCGCCAGCAATTGCGCACCACTGACTGGATCGGCC
TGGCCCGCGACCTGACCGATGCCGGCAAGCAGGTCGTCGTCTCGGCACAAGCCCTGCTCGAATCGGAAAGCGACCTCAAG
GCCCTGCGCCGGCTGATCGACGACGCAGGCTGCTGGCTCGAAGCCAATGACCTTGGCGCCGTCAACCTCGTGCACGGCCA
GGATTTCGTGGCCGGCCCGCATCTGAATATCTACAACGAGGCAACGCTGGCTTCCTTCGCCCGCTTTGGCCTGAAGCGCT
GGGTGCCGCCACTGGAAGGCTCACGGAGCATGATCGAGGCGCTACACCGGAAAAAGCCGGCCGATGTCGAGACCGAGGTT
TTCGCCTTCGGCAAGATTCCGCTCGCCTTCTCGGCCCGCTGCTTCACCGCCCGCCATTACGACCTGAACAAGGACGACTG
CCAGTTCAAATGCCTTGATCATGCCGAAGGTTTGACGCTGAAAACCCGCGAAGGGCAAGATTTCCTGACCATCAACGGCA
TTCAGACCATGTCGGCGCAGAGTTACAATCTGCTGCACGAAATGCCAGAAATGCTGAAGATGGGTATCGACATCGTGCGC
ATCAGCCCGCAGAAGCAACACATCAACGAAATCATCGCGGCCTTCGATGCTGCCCGACTTGGCGAGGCGGTGCAGGTCGA
CAGTCGGGACTGGAGTACCAGCGGCCTGGTGGACGGCTACTGGTTTGGCGATGCCGGCATCGTCCAGCGCCATACGCAGG
CCCTTGCCCAGTTGGGCGCATGA

Upstream 100 bases:

>100_bases
GTAAAACCAGCCTGGCAGGCGGAGCTGTCCAAGGTTTCCGAAGGCAGCCAGGCGACGCTCGGCGCCTACAGCCGGCCATG
GCGCTAAAGGACAAAGCAGC

Downstream 100 bases:

>100_bases
AACACGGAGCATGAACATGACCGGCAACTTCACCATTCCAAAATTCAAGCTGCCTGACTTCGTTGCCAACCTCGGCCAGA
AGCTGCCGCAATGGCCCCAC

Product: peptidase U32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MKLSLGPLLYFWPKGEVMEFYAEMAQNPALDIIYVGEVVCSRRQQLRTTDWIGLARDLTDAGKQVVVSAQALLESESDLK
ALRRLIDDAGCWLEANDLGAVNLVHGQDFVAGPHLNIYNEATLASFARFGLKRWVPPLEGSRSMIEALHRKKPADVETEV
FAFGKIPLAFSARCFTARHYDLNKDDCQFKCLDHAEGLTLKTREGQDFLTINGIQTMSAQSYNLLHEMPEMLKMGIDIVR
ISPQKQHINEIIAAFDAARLGEAVQVDSRDWSTSGLVDGYWFGDAGIVQRHTQALAQLGA

Sequences:

>Translated_300_residues
MKLSLGPLLYFWPKGEVMEFYAEMAQNPALDIIYVGEVVCSRRQQLRTTDWIGLARDLTDAGKQVVVSAQALLESESDLK
ALRRLIDDAGCWLEANDLGAVNLVHGQDFVAGPHLNIYNEATLASFARFGLKRWVPPLEGSRSMIEALHRKKPADVETEV
FAFGKIPLAFSARCFTARHYDLNKDDCQFKCLDHAEGLTLKTREGQDFLTINGIQTMSAQSYNLLHEMPEMLKMGIDIVR
ISPQKQHINEIIAAFDAARLGEAVQVDSRDWSTSGLVDGYWFGDAGIVQRHTQALAQLGA
>Mature_300_residues
MKLSLGPLLYFWPKGEVMEFYAEMAQNPALDIIYVGEVVCSRRQQLRTTDWIGLARDLTDAGKQVVVSAQALLESESDLK
ALRRLIDDAGCWLEANDLGAVNLVHGQDFVAGPHLNIYNEATLASFARFGLKRWVPPLEGSRSMIEALHRKKPADVETEV
FAFGKIPLAFSARCFTARHYDLNKDDCQFKCLDHAEGLTLKTREGQDFLTINGIQTMSAQSYNLLHEMPEMLKMGIDIVR
ISPQKQHINEIIAAFDAARLGEAVQVDSRDWSTSGLVDGYWFGDAGIVQRHTQALAQLGA

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082220, Length=294, Percent_Identity=39.1156462585034, Blast_Score=211, Evalue=4e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: NA

Molecular weight: Translated: 33456; Mature: 33456

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSLGPLLYFWPKGEVMEFYAEMAQNPALDIIYVGEVVCSRRQQLRTTDWIGLARDLTD
CCCCCCCEEEECCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHH
AGKQVVVSAQALLESESDLKALRRLIDDAGCWLEANDLGAVNLVHGQDFVAGPHLNIYNE
CCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEECCCCEEEEECCCCEECCCCCCCCCH
ATLASFARFGLKRWVPPLEGSRSMIEALHRKKPADVETEVFAFGKIPLAFSARCFTARHY
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCEECCEEEEEECC
DLNKDDCQFKCLDHAEGLTLKTREGQDFLTINGIQTMSAQSYNLLHEMPEMLKMGIDIVR
CCCCCCCEEEEECCCCCCEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEE
ISPQKQHINEIIAAFDAARLGEAVQVDSRDWSTSGLVDGYWFGDAGIVQRHTQALAQLGA
ECCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKLSLGPLLYFWPKGEVMEFYAEMAQNPALDIIYVGEVVCSRRQQLRTTDWIGLARDLTD
CCCCCCCEEEECCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHHH
AGKQVVVSAQALLESESDLKALRRLIDDAGCWLEANDLGAVNLVHGQDFVAGPHLNIYNE
CCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEECCCCEEEEECCCCEECCCCCCCCCH
ATLASFARFGLKRWVPPLEGSRSMIEALHRKKPADVETEVFAFGKIPLAFSARCFTARHY
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCEECCEEEEEECC
DLNKDDCQFKCLDHAEGLTLKTREGQDFLTINGIQTMSAQSYNLLHEMPEMLKMGIDIVR
CCCCCCCEEEEECCCCCCEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEE
ISPQKQHINEIIAAFDAARLGEAVQVDSRDWSTSGLVDGYWFGDAGIVQRHTQALAQLGA
ECCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]