| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
Click here to switch to the map view.
The map label for this gene is can [H]
Identifier: 71905741
GI number: 71905741
Start: 115726
End: 116889
Strand: Reverse
Name: can [H]
Synonym: Daro_0099
Alternate gene names: 71905741
Gene position: 116889-115726 (Counterclockwise)
Preceding gene: 71905742
Following gene: 71905740
Centisome position: 2.6
GC content: 62.03
Gene sequence:
>1164_bases ATGGAGCTAAACAGCATGACCGTTACCCTACGCACCCTCACCGCCAACGATAGCGAAGCCCTGGAGCAGGTTCGCCAGTA CTTCCGCAACTATGCGGCCTGGCTGGGCGTCGACCTGTCGTACCAGAACTTCGATCAGGAAATGGCCTCGCTGCCCGGCA CCTATGTCGCACCGCAGGGCCGCCTGTTCTTTGCCGAGGTTGATGGTCGCCCGGCCGGCTGTGTCGGCGTTCGCCCGCTG CCGGACAGCGATGGTGTCTGCGAAATGAAGCGCCTCTATGTCGATCCGGCCGAACGCGGCCACGGGATCGGTGCCGCGCT GGCGCTGGCCGCGATCAAGGCGGCCAAGGAAATCGGTTTCCGCAAGCTGATGATCGACACCCTGCCCAACATGCGTATGG CCGTGAAGCTCTACCGCGAACTGGGCTTCACCGAAGCACCGAACTATTACCAGACGCCAGTCGAAGGCACGATGTTCCTC GCCCTCGATCTGGAAAACTGGTCGGAAGAGGAAATCCGCAGCGAAAACCTGTCGCACCTGTTCGACTTCAACCGCGCCTG GGCCCGCCAGATGCAGGAAGTTGACCCAACCTACTTCGACCGCCTGTCCCACCTGCAGACACCGGAATTCCTGTGGATCG GCTGCTCCGATTCGCGCGTCCCGGCCAACCAGATCGTCGGCCTGCTACCGGGCGAGGTCTTCGTCCATCGCAACGTTGCC AATGTCGTCGTCCATACCGACCTCAACTGCCTGTCGGTCATCCAGTACGCAGTCGATGTGCTGAAGGTCAAGCACATCAT GGTCGTCGGCCATTACGGCTGCGGCGGCGTCGGCGCAGCATTGCAACGGGACCGGGTCGGCATCGTCGACCTCTGGCTGC GTCACGTTCATGACGTGCATAACAAGCATCTGGCCAACGTCAACAGCCTGCCGGAAGCGCAACGCCACGACCGCCTTTGC GAGCTGAACGTACTGGAGCAGGTGGTCAATGTCTGCCACAACCCGGTCGTCCAGGATGCCTGGAGCCGCGGCCAGCAACT GACCGTCCACGGCTGGGTTTACGGCCTGAAGGACGGCCTGATCCACGACCTCGGCATCACGATCGATTGCCCACAGGATT TGCCTTCCCGCTACGACGCCGCACTCAAAGCGTTGGACGCCTAG
Upstream 100 bases:
>100_bases CAGGCACCTCGGAAATCCGTAGAATGCTGATTGGTCGCGAACTCTTCGCTGAAACCGCATAACACGCTCCTGCCGGCGCT CCGGACAGGAGCGCCGCAAC
Downstream 100 bases:
>100_bases TTACAACAACCACTCAGGAGAAATCAGCATGAATGACCCGATCGTTATCGTTTCCGCCGCCCGTACCGCCATGGGCGCCT TTCAGGGCGGCTTTGCCGGC
Product: GCN5-related N-acetyltransferase:carbonic anhydrase
Products: NA
Alternate protein names: Carbonate dehydratase 2 [H]
Number of amino acids: Translated: 387; Mature: 387
Protein sequence:
>387_residues MELNSMTVTLRTLTANDSEALEQVRQYFRNYAAWLGVDLSYQNFDQEMASLPGTYVAPQGRLFFAEVDGRPAGCVGVRPL PDSDGVCEMKRLYVDPAERGHGIGAALALAAIKAAKEIGFRKLMIDTLPNMRMAVKLYRELGFTEAPNYYQTPVEGTMFL ALDLENWSEEEIRSENLSHLFDFNRAWARQMQEVDPTYFDRLSHLQTPEFLWIGCSDSRVPANQIVGLLPGEVFVHRNVA NVVVHTDLNCLSVIQYAVDVLKVKHIMVVGHYGCGGVGAALQRDRVGIVDLWLRHVHDVHNKHLANVNSLPEAQRHDRLC ELNVLEQVVNVCHNPVVQDAWSRGQQLTVHGWVYGLKDGLIHDLGITIDCPQDLPSRYDAALKALDA
Sequences:
>Translated_387_residues MELNSMTVTLRTLTANDSEALEQVRQYFRNYAAWLGVDLSYQNFDQEMASLPGTYVAPQGRLFFAEVDGRPAGCVGVRPL PDSDGVCEMKRLYVDPAERGHGIGAALALAAIKAAKEIGFRKLMIDTLPNMRMAVKLYRELGFTEAPNYYQTPVEGTMFL ALDLENWSEEEIRSENLSHLFDFNRAWARQMQEVDPTYFDRLSHLQTPEFLWIGCSDSRVPANQIVGLLPGEVFVHRNVA NVVVHTDLNCLSVIQYAVDVLKVKHIMVVGHYGCGGVGAALQRDRVGIVDLWLRHVHDVHNKHLANVNSLPEAQRHDRLC ELNVLEQVVNVCHNPVVQDAWSRGQQLTVHGWVYGLKDGLIHDLGITIDCPQDLPSRYDAALKALDA >Mature_387_residues MELNSMTVTLRTLTANDSEALEQVRQYFRNYAAWLGVDLSYQNFDQEMASLPGTYVAPQGRLFFAEVDGRPAGCVGVRPL PDSDGVCEMKRLYVDPAERGHGIGAALALAAIKAAKEIGFRKLMIDTLPNMRMAVKLYRELGFTEAPNYYQTPVEGTMFL ALDLENWSEEEIRSENLSHLFDFNRAWARQMQEVDPTYFDRLSHLQTPEFLWIGCSDSRVPANQIVGLLPGEVFVHRNVA NVVVHTDLNCLSVIQYAVDVLKVKHIMVVGHYGCGGVGAALQRDRVGIVDLWLRHVHDVHNKHLANVNSLPEAQRHDRLC ELNVLEQVVNVCHNPVVQDAWSRGQQLTVHGWVYGLKDGLIHDLGITIDCPQDLPSRYDAALKALDA
Specific function: Unknown
COG id: COG0288
COG function: function code P; Carbonic anhydrase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the beta-class carbonic anhydrase family [H]
Homologues:
Organism=Escherichia coli, GI1786318, Length=211, Percent_Identity=51.6587677725119, Blast_Score=248, Evalue=4e-67, Organism=Escherichia coli, GI1786534, Length=170, Percent_Identity=32.3529411764706, Blast_Score=82, Evalue=7e-17, Organism=Escherichia coli, GI48995002, Length=136, Percent_Identity=33.8235294117647, Blast_Score=65, Evalue=9e-12, Organism=Saccharomyces cerevisiae, GI6324292, Length=205, Percent_Identity=32.1951219512195, Blast_Score=112, Evalue=7e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001765 - InterPro: IPR015892 [H]
Pfam domain/function: PF00484 Pro_CA [H]
EC number: =4.2.1.1 [H]
Molecular weight: Translated: 43415; Mature: 43415
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: PS00704 PROK_CO2_ANHYDRASE_1 ; PS00705 PROK_CO2_ANHYDRASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELNSMTVTLRTLTANDSEALEQVRQYFRNYAAWLGVDLSYQNFDQEMASLPGTYVAPQG CCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEECCCC RLFFAEVDGRPAGCVGVRPLPDSDGVCEMKRLYVDPAERGHGIGAALALAAIKAAKEIGF CEEEEEECCCCCCEECCCCCCCCCCHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHH RKLMIDTLPNMRMAVKLYRELGFTEAPNYYQTPVEGTMFLALDLENWSEEEIRSENLSHL HHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHH FDFNRAWARQMQEVDPTYFDRLSHLQTPEFLWIGCSDSRVPANQIVGLLPGEVFVHRNVA HHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHCCCCEEEECCCE NVVVHTDLNCLSVIQYAVDVLKVKHIMVVGHYGCGGVGAALQRDRVGIVDLWLRHVHDVH EEEEECCCHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHH NKHLANVNSLPEAQRHDRLCELNVLEQVVNVCHNPVVQDAWSRGQQLTVHGWVYGLKDGL HHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEEEEEEHHCCC IHDLGITIDCPQDLPSRYDAALKALDA EECCCEEEECCHHHHHHHHHHHHHHCC >Mature Secondary Structure MELNSMTVTLRTLTANDSEALEQVRQYFRNYAAWLGVDLSYQNFDQEMASLPGTYVAPQG CCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEECCCC RLFFAEVDGRPAGCVGVRPLPDSDGVCEMKRLYVDPAERGHGIGAALALAAIKAAKEIGF CEEEEEECCCCCCEECCCCCCCCCCHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHHH RKLMIDTLPNMRMAVKLYRELGFTEAPNYYQTPVEGTMFLALDLENWSEEEIRSENLSHL HHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHH FDFNRAWARQMQEVDPTYFDRLSHLQTPEFLWIGCSDSRVPANQIVGLLPGEVFVHRNVA HHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHCCCCEEEECCCE NVVVHTDLNCLSVIQYAVDVLKVKHIMVVGHYGCGGVGAALQRDRVGIVDLWLRHVHDVH EEEEECCCHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHH NKHLANVNSLPEAQRHDRLCELNVLEQVVNVCHNPVVQDAWSRGQQLTVHGWVYGLKDGL HHHHCCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEEEEEEEEHHCCC IHDLGITIDCPQDLPSRYDAALKALDA EECCCEEEECCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8202364; 9278503; 10493123 [H]