| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71905708
Identifier: 71905708
GI number: 71905708
Start: 82138
End: 82770
Strand: Reverse
Name: 71905708
Synonym: Daro_0066
Alternate gene names: NA
Gene position: 82770-82138 (Counterclockwise)
Preceding gene: 71905709
Following gene: 71905706
Centisome position: 1.84
GC content: 57.98
Gene sequence:
>633_bases ATGGGCTGGTTTGACTTTATCCGTTCCCCATCCGGCAATGCGGTCGAAACGCTGCGCATCCCCCTCTTCCCGCTCAGCAC GGTACTCTTCCCTGGCAGCATGCTGCCGCTGAAAATCTTCGAGCAACGCTACCTCGACATGGCTGCCGCCTGCATGAAGA TCAACAGCCCCTTCGGCATCTGTCTGATCGAAAAAGGTAGCGAAGTCGGTGAGACGGCCGTTCCCCACCCTATCGGCACG CTCGCAACAATCAGCAACTGGGAGATGGAGCAACTTGGCATTCTGATGATCACCGCCCAGGGTGGTCGCCGTTTCCGGAT TATCGAAAGCACCGTCGGAGCGGGAGGCCTGCTCGAAGCAAACGTCGAACTGCTGGCCGAAACCGGCCCGACACCACTAC CGCCAGAGCGCGAACGCCTCGTTCCCCTGCTCCGCCGCATCGTCGGCGACCTCGGCAAGGAACGCATGCCCGAACCGTAT CGCTACGACGAAGCAGAATGGGTGGGCTATCGGATTACCGAAGTTTTGCCTATCCAGAATCTGGCCAAGCAAAAGCTGCT GGAACTGGATGACCCGATTGCACGACTGGAAATTCTTGAGAAGTATCTTACTCAACGCAGGCTACTTGGCTGA
Upstream 100 bases:
>100_bases CAGAGCGTGCAGGACATTGTCGATTTCGTTGTCGCCCGCGCGCTCGACCAGATCGGCGTGGCGCACAAGTTGATGCAGCG CTGGGGCGAGGAGCGCTGAC
Downstream 100 bases:
>100_bases TATCCAGCCATCCTCAAGCGATTAGCGCGTGAACCAGAGTCAGCCTATTAGCACGCACTACCAGTCCAAAAAGCTCAAAA AGCCCGTTACCAGGCCCAAA
Product: peptidase S16, lon N-terminal
Products: NA
Alternate protein names: ATP-Dependent Protease La; ATP-Dependent Protease La Domain Protein; ATP-Dependent Protease La Domain-Containing Protein; Protease; ATP-Dependent Endopeptidase Lon; Peptidase S
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MGWFDFIRSPSGNAVETLRIPLFPLSTVLFPGSMLPLKIFEQRYLDMAAACMKINSPFGICLIEKGSEVGETAVPHPIGT LATISNWEMEQLGILMITAQGGRRFRIIESTVGAGGLLEANVELLAETGPTPLPPERERLVPLLRRIVGDLGKERMPEPY RYDEAEWVGYRITEVLPIQNLAKQKLLELDDPIARLEILEKYLTQRRLLG
Sequences:
>Translated_210_residues MGWFDFIRSPSGNAVETLRIPLFPLSTVLFPGSMLPLKIFEQRYLDMAAACMKINSPFGICLIEKGSEVGETAVPHPIGT LATISNWEMEQLGILMITAQGGRRFRIIESTVGAGGLLEANVELLAETGPTPLPPERERLVPLLRRIVGDLGKERMPEPY RYDEAEWVGYRITEVLPIQNLAKQKLLELDDPIARLEILEKYLTQRRLLG >Mature_209_residues GWFDFIRSPSGNAVETLRIPLFPLSTVLFPGSMLPLKIFEQRYLDMAAACMKINSPFGICLIEKGSEVGETAVPHPIGTL ATISNWEMEQLGILMITAQGGRRFRIIESTVGAGGLLEANVELLAETGPTPLPPERERLVPLLRRIVGDLGKERMPEPYR YDEAEWVGYRITEVLPIQNLAKQKLLELDDPIARLEILEKYLTQRRLLG
Specific function: Unknown
COG id: COG2802
COG function: function code R; Uncharacterized protein, similar to the N-terminal domain of Lon protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23543; Mature: 23412
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGWFDFIRSPSGNAVETLRIPLFPLSTVLFPGSMLPLKIFEQRYLDMAAACMKINSPFGI CCHHHHHCCCCCCCEEEEEECCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEE CLIEKGSEVGETAVPHPIGTLATISNWEMEQLGILMITAQGGRRFRIIESTVGAGGLLEA EEECCCCCCCCCCCCCCCCCHHCCCCCCHHHCCEEEEECCCCCEEEEEECCCCCCCEECC NVELLAETGPTPLPPERERLVPLLRRIVGDLGKERMPEPYRYDEAEWVGYRITEVLPIQN CHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHHCHHH LAKQKLLELDDPIARLEILEKYLTQRRLLG HHHHHHHHCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GWFDFIRSPSGNAVETLRIPLFPLSTVLFPGSMLPLKIFEQRYLDMAAACMKINSPFGI CHHHHHCCCCCCCEEEEEECCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEE CLIEKGSEVGETAVPHPIGTLATISNWEMEQLGILMITAQGGRRFRIIESTVGAGGLLEA EEECCCCCCCCCCCCCCCCCHHCCCCCCHHHCCEEEEECCCCCEEEEEECCCCCCCEECC NVELLAETGPTPLPPERERLVPLLRRIVGDLGKERMPEPYRYDEAEWVGYRITEVLPIQN CHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCHHHHHHCHHH LAKQKLLELDDPIARLEILEKYLTQRRLLG HHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA