Click here to switch to the map view.

The map label for this gene is ubiX [C]

Identifier: 71905709

GI number: 71905709

Start: 82772

End: 83383

Strand: Reverse

Name: ubiX [C]

Synonym: Daro_0067

Alternate gene names: 71905709

Gene position: 83383-82772 (Counterclockwise)

Preceding gene: 71905710

Following gene: 71905708

Centisome position: 1.85

GC content: 63.56

Gene sequence:

>612_bases
ATGTCCAAGACTATCTGCCTCGCCCTGACCGGTGCCTCCGGGATGCCCTACGGCCTGCGCCTGCTCGAATGCCTGCTCAA
CGCCGGCTGCAAGGTACAGCTGCTCTATTCGCAGGCGTCACAGATCGTTGCCCGCCAGGAACTGGATTTCGAACTCCCCT
CCCGCCCGGCCGATGCCAAAAGTGCGCTGCTCGCCCGCTTTCCGTCGATCTCCCCGGAAAACCTGACCGTCTTTGGCCGC
GAGGAGTGGTTCGCCCCGGTTGCCTCGGGCTCCAACCCCCCCGATGCCATGATCATTTGCCCCTGTTCGATGGGAACGCT
GGCCGCGATCGCCCAGGGCTTGGCCGACAACCTGATCGAACGTGCTGCCGATGTGGTCATGAAAGAAGGCCGAAAACTGG
TGCTCGTGCCACGGGAAACGCCTTTCTCGGCCATCCACCTCGAAAACATGCTGCGCCTGTCGCGAGCAGGGGCTGTCATT
CTGCCGCCCAGCCCCGGCTTCTATCACCACCCACAGAGCGTGCAGGACATTGTCGATTTCGTTGTCGCCCGCGCGCTCGA
CCAGATCGGCGTGGCGCACAAGTTGATGCAGCGCTGGGGCGAGGAGCGCTGA

Upstream 100 bases:

>100_bases
TCACGCCAGTTTTTGCCGGTGCCGCGCTGGTGTTCGGTACCATCAACGGCCTGATCGCGGCTAAACTGCTGGCTGAACCC
GCGCCTTCGGAAATGCCCTG

Downstream 100 bases:

>100_bases
CATGGGCTGGTTTGACTTTATCCGTTCCCCATCCGGCAATGCGGTCGAAACGCTGCGCATCCCCCTCTTCCCGCTCAGCA
CGGTACTCTTCCCTGGCAGC

Product: aromatic acid decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MSKTICLALTGASGMPYGLRLLECLLNAGCKVQLLYSQASQIVARQELDFELPSRPADAKSALLARFPSISPENLTVFGR
EEWFAPVASGSNPPDAMIICPCSMGTLAAIAQGLADNLIERAADVVMKEGRKLVLVPRETPFSAIHLENMLRLSRAGAVI
LPPSPGFYHHPQSVQDIVDFVVARALDQIGVAHKLMQRWGEER

Sequences:

>Translated_203_residues
MSKTICLALTGASGMPYGLRLLECLLNAGCKVQLLYSQASQIVARQELDFELPSRPADAKSALLARFPSISPENLTVFGR
EEWFAPVASGSNPPDAMIICPCSMGTLAAIAQGLADNLIERAADVVMKEGRKLVLVPRETPFSAIHLENMLRLSRAGAVI
LPPSPGFYHHPQSVQDIVDFVVARALDQIGVAHKLMQRWGEER
>Mature_202_residues
SKTICLALTGASGMPYGLRLLECLLNAGCKVQLLYSQASQIVARQELDFELPSRPADAKSALLARFPSISPENLTVFGRE
EWFAPVASGSNPPDAMIICPCSMGTLAAIAQGLADNLIERAADVVMKEGRKLVLVPRETPFSAIHLENMLRLSRAGAVIL
PPSPGFYHHPQSVQDIVDFVVARALDQIGVAHKLMQRWGEER

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl p-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=200, Percent_Identity=39, Blast_Score=128, Evalue=2e-31,
Organism=Saccharomyces cerevisiae, GI6320746, Length=197, Percent_Identity=42.6395939086294, Blast_Score=149, Evalue=3e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: 4.1.1.-

Molecular weight: Translated: 22064; Mature: 21933

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKTICLALTGASGMPYGLRLLECLLNAGCKVQLLYSQASQIVARQELDFELPSRPADAK
CCCEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCHHH
SALLARFPSISPENLTVFGREEWFAPVASGSNPPDAMIICPCSMGTLAAIAQGLADNLIE
HHHHHHCCCCCCCCEEEEECHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH
RAADVVMKEGRKLVLVPRETPFSAIHLENMLRLSRAGAVILPPSPGFYHHPQSVQDIVDF
HHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHH
VVARALDQIGVAHKLMQRWGEER
HHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SKTICLALTGASGMPYGLRLLECLLNAGCKVQLLYSQASQIVARQELDFELPSRPADAK
CCEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCHHH
SALLARFPSISPENLTVFGREEWFAPVASGSNPPDAMIICPCSMGTLAAIAQGLADNLIE
HHHHHHCCCCCCCCEEEEECHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH
RAADVVMKEGRKLVLVPRETPFSAIHLENMLRLSRAGAVILPPSPGFYHHPQSVQDIVDF
HHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHH
VVARALDQIGVAHKLMQRWGEER
HHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]