| Definition | Dechloromonas aromatica RCB, complete genome. |
|---|---|
| Accession | NC_007298 |
| Length | 4,501,104 |
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The map label for this gene is 71905701
Identifier: 71905701
GI number: 71905701
Start: 68936
End: 69799
Strand: Reverse
Name: 71905701
Synonym: Daro_0059
Alternate gene names: NA
Gene position: 69799-68936 (Counterclockwise)
Preceding gene: 71905703
Following gene: 71905700
Centisome position: 1.55
GC content: 58.8
Gene sequence:
>864_bases ATGCGCTTGATAACAAAAATGATCGTGCTGGCGTTCAGCTTGCTGCTGTGCGCTTCAAGCTTGTCTCTGGCCGATGAAAA ATTGGCCGAGAGGCGGCCGTTGACGGTCGGCCTGATGCCCTATCTGAGCACGCGCACACTGCTGGCCAATTATCAGCCGA TTGCAGCAGCCCTTGAAGATGCTTTGAAGCAGCCGGTTCAGTTACTGACCGCACCGGATTTTGATACCTTCGTCAGGCGC GTGCTGGATGGCGAATACGACATTGCGCTCCTCGCTCCGCACTACGCCCGCCTGGCCATCAAGAGTTATGGCTATACGCC GTTACTGCTCCACAAGTCACCAATCCGAGGCGTTCTGGTCAGCAGTCGCGCCCAACCGCTGGCCAGCTTCAACGACCTGC GTGGCCAGAACATCGCTATCGTCGACCGCAGCGCACTGCTGGTCATCGCCGGGGCCATCACGCTCGGGGAGAATGGACTG ACTGAGGGCAGCGACTATCACTTCATCGAAACGGTCAGTCACTCGAGCGCGCTGCATAACGCCATTTCAGGCAAGGCCCG GGCCGCGCTGGTGTCTTATTCGACCCTGGTTCTGGCCGCCCCCGAACTGCAACGCGATGCCCTGCTCTGGCGCGACATTG CCAGCATTCCCGGGCAGTTCTACATTGCTCACAGCCGGGTTCCGCCTGCCAGACAGCTGGCGGTAAAAGCGGCACTGCTG GCTTTCGAAAAAACCCCCGAAGGCCAGCTATTTTTTGAAAAAACCAAGCACGGCGGATTCCGCGAACCGACTGCCGAGGA TTATGTGCTTCTCGACAAGATGATGCCGGAAACCCGTCGCCTGTTGGGCAACACCGTCCGCTGA
Upstream 100 bases:
>100_bases CCAAACGCTGACGGGAGTCATGCCGCGAAAAACGCTCGTAATTATTGCGTTAGACGGTGACAATAATCAGGCAGTGCCAC TGGATTTGAGGGGGATTCGG
Downstream 100 bases:
>100_bases TGACCTTGATGAAACTCCCCCGTTCGCTGCGCACCCGCCTGATTACGCTGAGCATCATCGTCGAGATCGTGATGATCTCG GCCATCGTCTGGAACAGCCA
Product: ABC-type phosphate/phosphonate transport system periplasmic component-like protein
Products: NA
Alternate protein names: ABC-Type Transport System Periplasmic Component
Number of amino acids: Translated: 287; Mature: 287
Protein sequence:
>287_residues MRLITKMIVLAFSLLLCASSLSLADEKLAERRPLTVGLMPYLSTRTLLANYQPIAAALEDALKQPVQLLTAPDFDTFVRR VLDGEYDIALLAPHYARLAIKSYGYTPLLLHKSPIRGVLVSSRAQPLASFNDLRGQNIAIVDRSALLVIAGAITLGENGL TEGSDYHFIETVSHSSALHNAISGKARAALVSYSTLVLAAPELQRDALLWRDIASIPGQFYIAHSRVPPARQLAVKAALL AFEKTPEGQLFFEKTKHGGFREPTAEDYVLLDKMMPETRRLLGNTVR
Sequences:
>Translated_287_residues MRLITKMIVLAFSLLLCASSLSLADEKLAERRPLTVGLMPYLSTRTLLANYQPIAAALEDALKQPVQLLTAPDFDTFVRR VLDGEYDIALLAPHYARLAIKSYGYTPLLLHKSPIRGVLVSSRAQPLASFNDLRGQNIAIVDRSALLVIAGAITLGENGL TEGSDYHFIETVSHSSALHNAISGKARAALVSYSTLVLAAPELQRDALLWRDIASIPGQFYIAHSRVPPARQLAVKAALL AFEKTPEGQLFFEKTKHGGFREPTAEDYVLLDKMMPETRRLLGNTVR >Mature_287_residues MRLITKMIVLAFSLLLCASSLSLADEKLAERRPLTVGLMPYLSTRTLLANYQPIAAALEDALKQPVQLLTAPDFDTFVRR VLDGEYDIALLAPHYARLAIKSYGYTPLLLHKSPIRGVLVSSRAQPLASFNDLRGQNIAIVDRSALLVIAGAITLGENGL TEGSDYHFIETVSHSSALHNAISGKARAALVSYSTLVLAAPELQRDALLWRDIASIPGQFYIAHSRVPPARQLAVKAALL AFEKTPEGQLFFEKTKHGGFREPTAEDYVLLDKMMPETRRLLGNTVR
Specific function: Unknown
COG id: COG3221
COG function: function code P; ABC-type phosphate/phosphonate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31519; Mature: 31519
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLITKMIVLAFSLLLCASSLSLADEKLAERRPLTVGLMPYLSTRTLLANYQPIAAALED CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCHHHHHHHH ALKQPVQLLTAPDFDTFVRRVLDGEYDIALLAPHYARLAIKSYGYTPLLLHKSPIRGVLV HHHHHHHHHCCCCHHHHHHHHHCCCCCEEEECCHHHHHHHHHCCCCEEEEECCCCCCEEE SSRAQPLASFNDLRGQNIAIVDRSALLVIAGAITLGENGLTEGSDYHFIETVSHSSALHN CCCCCHHHHHHHCCCCEEEEEECCEEEEEEEHHEECCCCCCCCCCCEEEEEHHHHHHHHH AISGKARAALVSYSTLVLAAPELQRDALLWRDIASIPGQFYIAHSRVPPARQLAVKAALL HHCCHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHH AFEKTPEGQLFFEKTKHGGFREPTAEDYVLLDKMMPETRRLLGNTVR HHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCHHHHHHHCCCCC >Mature Secondary Structure MRLITKMIVLAFSLLLCASSLSLADEKLAERRPLTVGLMPYLSTRTLLANYQPIAAALED CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCHHHHHHHH ALKQPVQLLTAPDFDTFVRRVLDGEYDIALLAPHYARLAIKSYGYTPLLLHKSPIRGVLV HHHHHHHHHCCCCHHHHHHHHHCCCCCEEEECCHHHHHHHHHCCCCEEEEECCCCCCEEE SSRAQPLASFNDLRGQNIAIVDRSALLVIAGAITLGENGLTEGSDYHFIETVSHSSALHN CCCCCHHHHHHHCCCCEEEEEECCEEEEEEEHHEECCCCCCCCCCCEEEEEHHHHHHHHH AISGKARAALVSYSTLVLAAPELQRDALLWRDIASIPGQFYIAHSRVPPARQLAVKAALL HHCCHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHH AFEKTPEGQLFFEKTKHGGFREPTAEDYVLLDKMMPETRRLLGNTVR HHCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA