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The map label for this gene is comM [H]

Identifier: 71905692

GI number: 71905692

Start: 59706

End: 61202

Strand: Reverse

Name: comM [H]

Synonym: Daro_0050

Alternate gene names: 71905692

Gene position: 61202-59706 (Counterclockwise)

Preceding gene: 71905693

Following gene: 71905691

Centisome position: 1.36

GC content: 63.59

Gene sequence:

>1497_bases
ATGGCGCTGGCCATCGCATACAGCCGCGGGCTGGATGGCCTGAACGCGCCACCAGTCATTGTCGAGGCGCACCTCGCCAG
CGGCCTGCCCAGCTTCACGCTGGTTGGCCTGCCCGACACCGAGGTCAAGGAAGCGCGTGACCGTGTCCGCGCGGCCATCG
TCAATTCCGGCTTCGAATTCCCCAGCAAACGCATTACCGTCAATCTGGCGCCAGCCGACCTGCCCAAGGAGTCCGGTCGC
TTCGACCTGCCCATCGCGCTCGGCATCCTGGCAGCCAGCGGACAGATTCCAACGCCAGCGCTGGCCGATTACGAATTTGC
CGGCGAATTGTCCTTGTCTGGCGAACTGCGTCCGATTCGCGGTGCCCTGGCCATGGCCCTGCAAAGCAGCGACAACGGCA
AAACCTTCATCCTGCCTGAAGCCAGCGCCCAGGAAGCCGCACTGACCGGTTCGACCCACATTCTGGCGGCGCGTTCGCTG
CTCGATGTCTGCGCCCACCTGGCTGATCGCGAATTGCTGCCGCCCGCAGTGGCCACAGCCAATACCGAAAACTGGCCAAA
ATTTCCAGATATTTCCGAGGTTCGAGGTCAGAGTCAGGCCAAGCGGGCGCTGGAAATTGCCGCGGCTGGAAACCATTCTC
TATTGATGGTCGGCCCGCCCGGTTCGGGCAAATCGATGCTCGCCGCCCGTTTGCCAGGCCTGATGCCGCGCCTCGAAGGC
GAAGCGGCCAAAGCCTCGGCCGCTGTCCTTTCGCTGGTCGGGCAATTCCAACCAGAGGCCTTTGGCGTTCGCCCTTACCG
TCAGCCCCATCACACCGCTTCGGCGGTCGCTTTGGTCGGTGGTGGTAATCCGCCGCGGCCTGGCGAAATCAGCCTGGCTC
ACCAGGGCATCCTGTTCCTCGACGAATTGCCCGAGTTCGACCGCAAGGTACTCGAAACTCTGCGCGAACCACTGGAATCC
GGGCGCATCCATATCGCCCGGGCAGCCCGCCATGCCGAATTCCCGGCCGAATTCCAGTTGATTGCGGCAATGAATCCCTG
CCCCTGCGGATTTTTGGGACATGGCAATAATAAATGCCGTTGCACGCCGGACCAGATCGCCCGTTACCGAGGCAAGCTAT
CCGGCCCCTTTCTTGACCGCATCGACCTGATCATCGAAGTGCCGGCCCTGCCGTCCGACGCGCTGTCCGGCAAGGCCGAC
GGCGAATCATCGGAAACCGTGCGCACTCGCGTCGAGCAAGCCCAGGTGCGGCAACAAACCCGCCAGAGCAAGCCGAACGC
CCGCCTGAACACCAAGGAAGTCGATGCCTGCTGTCAGCCCGACGAAACCGGCAGCAAGCTGTTGCAACAGGCGACGACGC
AGCTCGACCTGTCGGCCCGGGCCTGGCACCGCATCCTGAAAGTCGCCCGAACCATTGCCGATCTGGCCGGCAACGACGAC
ATCCGCGCCACCCACATCGCCGAGGCCATCCAGTACCGGCGCTTTGGCCGTGGCTGA

Upstream 100 bases:

>100_bases
CGTTCAGGCGCAAGTACTGGCCCGCACCCGCGAAAAGCTGCAGGCGCTGGAAGCCCGCGTCGACGCGCTGGAAAAGGCCC
GCTCGGGCCAGTAGCACAAC

Downstream 100 bases:

>100_bases
GGTCAGCCGGCGCGAGACGCGCGGCATCGCCATCCTGCTCGCCTCTATGTCGGCGATCGGGCCATTTTCGATCGACACCT
ACCTGCCGTCCTTCCACGAG

Product: Mg chelatase-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 498; Mature: 497

Protein sequence:

>498_residues
MALAIAYSRGLDGLNAPPVIVEAHLASGLPSFTLVGLPDTEVKEARDRVRAAIVNSGFEFPSKRITVNLAPADLPKESGR
FDLPIALGILAASGQIPTPALADYEFAGELSLSGELRPIRGALAMALQSSDNGKTFILPEASAQEAALTGSTHILAARSL
LDVCAHLADRELLPPAVATANTENWPKFPDISEVRGQSQAKRALEIAAAGNHSLLMVGPPGSGKSMLAARLPGLMPRLEG
EAAKASAAVLSLVGQFQPEAFGVRPYRQPHHTASAVALVGGGNPPRPGEISLAHQGILFLDELPEFDRKVLETLREPLES
GRIHIARAARHAEFPAEFQLIAAMNPCPCGFLGHGNNKCRCTPDQIARYRGKLSGPFLDRIDLIIEVPALPSDALSGKAD
GESSETVRTRVEQAQVRQQTRQSKPNARLNTKEVDACCQPDETGSKLLQQATTQLDLSARAWHRILKVARTIADLAGNDD
IRATHIAEAIQYRRFGRG

Sequences:

>Translated_498_residues
MALAIAYSRGLDGLNAPPVIVEAHLASGLPSFTLVGLPDTEVKEARDRVRAAIVNSGFEFPSKRITVNLAPADLPKESGR
FDLPIALGILAASGQIPTPALADYEFAGELSLSGELRPIRGALAMALQSSDNGKTFILPEASAQEAALTGSTHILAARSL
LDVCAHLADRELLPPAVATANTENWPKFPDISEVRGQSQAKRALEIAAAGNHSLLMVGPPGSGKSMLAARLPGLMPRLEG
EAAKASAAVLSLVGQFQPEAFGVRPYRQPHHTASAVALVGGGNPPRPGEISLAHQGILFLDELPEFDRKVLETLREPLES
GRIHIARAARHAEFPAEFQLIAAMNPCPCGFLGHGNNKCRCTPDQIARYRGKLSGPFLDRIDLIIEVPALPSDALSGKAD
GESSETVRTRVEQAQVRQQTRQSKPNARLNTKEVDACCQPDETGSKLLQQATTQLDLSARAWHRILKVARTIADLAGNDD
IRATHIAEAIQYRRFGRG
>Mature_497_residues
ALAIAYSRGLDGLNAPPVIVEAHLASGLPSFTLVGLPDTEVKEARDRVRAAIVNSGFEFPSKRITVNLAPADLPKESGRF
DLPIALGILAASGQIPTPALADYEFAGELSLSGELRPIRGALAMALQSSDNGKTFILPEASAQEAALTGSTHILAARSLL
DVCAHLADRELLPPAVATANTENWPKFPDISEVRGQSQAKRALEIAAAGNHSLLMVGPPGSGKSMLAARLPGLMPRLEGE
AAKASAAVLSLVGQFQPEAFGVRPYRQPHHTASAVALVGGGNPPRPGEISLAHQGILFLDELPEFDRKVLETLREPLESG
RIHIARAARHAEFPAEFQLIAAMNPCPCGFLGHGNNKCRCTPDQIARYRGKLSGPFLDRIDLIIEVPALPSDALSGKADG
ESSETVRTRVEQAQVRQQTRQSKPNARLNTKEVDACCQPDETGSKLLQQATTQLDLSARAWHRILKVARTIADLAGNDDI
RATHIAEAIQYRRFGRG

Specific function: Induced during competence development. Not needed for DNA uptake. May be involved in a recombination step [H]

COG id: COG0606

COG function: function code O; Predicted ATPase with chaperone activity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mg-chelatase subunits D/I family. ComM subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693202, Length=499, Percent_Identity=50.3006012024048, Blast_Score=479, Evalue=1e-136,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR001208
- InterPro:   IPR004482
- InterPro:   IPR000523
- InterPro:   IPR020568 [H]

Pfam domain/function: PF01078 Mg_chelatase [H]

EC number: NA

Molecular weight: Translated: 53216; Mature: 53085

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALAIAYSRGLDGLNAPPVIVEAHLASGLPSFTLVGLPDTEVKEARDRVRAAIVNSGFEF
CEEEEEECCCCCCCCCCCEEEEEHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCC
PSKRITVNLAPADLPKESGRFDLPIALGILAASGQIPTPALADYEFAGELSLSGELRPIR
CCCEEEEEECCCCCCCCCCCCCCHHHEEEEECCCCCCCCCCCCCCCCCCEECCCCCCHHH
GALAMALQSSDNGKTFILPEASAQEAALTGSTHILAARSLLDVCAHLADRELLPPAVATA
HHHHHHHHCCCCCCEEEECCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
NTENWPKFPDISEVRGQSQAKRALEIAAAGNHSLLMVGPPGSGKSMLAARLPGLMPRLEG
CCCCCCCCCCHHHHCCHHHHHHHHEEEECCCCEEEEEECCCCCHHHHHHHCCCCCCCCCC
EAAKASAAVLSLVGQFQPEAFGVRPYRQPHHTASAVALVGGGNPPRPGEISLAHQGILFL
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCEEEH
DELPEFDRKVLETLREPLESGRIHIARAARHAEFPAEFQLIAAMNPCPCGFLGHGNNKCR
HHCCHHHHHHHHHHHHHHHCCCEEEEEHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCE
CTPDQIARYRGKLSGPFLDRIDLIIEVPALPSDALSGKADGESSETVRTRVEQAQVRQQT
ECHHHHHHHHCCCCCCHHHHEEEEEECCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHH
RQSKPNARLNTKEVDACCQPDETGSKLLQQATTQLDLSARAWHRILKVARTIADLAGNDD
HHCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCC
IRATHIAEAIQYRRFGRG
CHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ALAIAYSRGLDGLNAPPVIVEAHLASGLPSFTLVGLPDTEVKEARDRVRAAIVNSGFEF
EEEEEECCCCCCCCCCCEEEEEHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCC
PSKRITVNLAPADLPKESGRFDLPIALGILAASGQIPTPALADYEFAGELSLSGELRPIR
CCCEEEEEECCCCCCCCCCCCCCHHHEEEEECCCCCCCCCCCCCCCCCCEECCCCCCHHH
GALAMALQSSDNGKTFILPEASAQEAALTGSTHILAARSLLDVCAHLADRELLPPAVATA
HHHHHHHHCCCCCCEEEECCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
NTENWPKFPDISEVRGQSQAKRALEIAAAGNHSLLMVGPPGSGKSMLAARLPGLMPRLEG
CCCCCCCCCCHHHHCCHHHHHHHHEEEECCCCEEEEEECCCCCHHHHHHHCCCCCCCCCC
EAAKASAAVLSLVGQFQPEAFGVRPYRQPHHTASAVALVGGGNPPRPGEISLAHQGILFL
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCEEEH
DELPEFDRKVLETLREPLESGRIHIARAARHAEFPAEFQLIAAMNPCPCGFLGHGNNKCR
HHCCHHHHHHHHHHHHHHHCCCEEEEEHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCE
CTPDQIARYRGKLSGPFLDRIDLIIEVPALPSDALSGKADGESSETVRTRVEQAQVRQQT
ECHHHHHHHHCCCCCCHHHHEEEEEECCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHH
RQSKPNARLNTKEVDACCQPDETGSKLLQQATTQLDLSARAWHRILKVARTIADLAGNDD
HHCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCC
IRATHIAEAIQYRRFGRG
CHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 9457884 [H]