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The map label for this gene is yqkD [H]

Identifier: 71911421

GI number: 71911421

Start: 1565347

End: 1566273

Strand: Reverse

Name: yqkD [H]

Synonym: M5005_Spy_1608

Alternate gene names: 71911421

Gene position: 1566273-1565347 (Counterclockwise)

Preceding gene: 71911422

Following gene: 71911420

Centisome position: 85.19

GC content: 38.94

Gene sequence:

>927_bases
ATGAAAACTATTCGAATAGCAAAGTATTTAGGAATTCTATTCCTTTTGATAACTCTTATTAGCGTAGGTGCTAGTTTTTA
TTTCTTTCATGTTGCACAAATAAGAGAAGAGAAATCGTTTATTAATAATAAGAAACGGAGTACAAATAATCCATTATACC
CAGCTGAACAGTCTTTTGACGCTTTACCTTACGAAAAACGTCAACTAACAAATCGTGGGTTAAAACAAGTGGGGTGGTAC
TTACCAGCTGCTCAAAAAACAAAAAAGACAGCTATTGTTGTTCATGGTTTTACGAATGACAAAGAAGATATGAAGCCATA
TGCCATGCTTTTTCATGATTTGGGCTATAATGTCTTAATGCCAGACAATGAGGCCCATGGGGAAAGTGAAGGGAACTTGA
TTGGTTATGGCTGGAATGACCGCCTTAATGTCATGGCTTGGACAGACCAACTGATTAAGGAAAACCCTGAAAGCCAAATC
ACACTCTTTGGCTTATCTATGGGTGCTGCAACAGTAATGATGGCAAGTGGTGAGCGATTGCCTGCGCAAGTCACCTCCCT
CATCGAAGATTGCGGTTATGCCAGTGTTTGGGACGAATTGAAGTTTCAGGCCAAGGCTATGTACAACTTGCCTGCCTTTC
CTTTACTCTATGAAGTCTCTGCCTTATCTAAGATTCGAGCAGGTTTTAGTTACGGAGAAGCGAGCTCAGTGAAACAGCTG
GCTAAAAATAAACGTCCAACTTTATTTATCCACGGTGATAAGGATGATTTTGTTCCTACAAAAATGGTTTATGACAATTA
TAAGGCCACGAAAGGTCCTAAGGAAATCTTGATTGTTAAAGGGGCAAAACACGCCAAATCCTTTGAAACAAACCCAGAAC
AATACCAGAAAAAAATTGCCGCTTTTTTGAAAAAAGTTGAGAAATAA

Upstream 100 bases:

>100_bases
AAAGGGATCTTTTCTATAAAAATAGCATTAGAAAAAGAAAAACGTGATATTTTTAGGTTAGCACTTTCTTTTTCAGTCAT
TTTTTTGTAAAATACTTGGT

Downstream 100 bases:

>100_bases
GTATTGACAGTTAAACTCACAGTTGCTATAATAATTTATGTTACTGATGAGTAGCGGGGATGGCGGAATTGGCAGACGCG
CAGGACTAAGGATCCTGTGA

Product: alpha/beta hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MKTIRIAKYLGILFLLITLISVGASFYFFHVAQIREEKSFINNKKRSTNNPLYPAEQSFDALPYEKRQLTNRGLKQVGWY
LPAAQKTKKTAIVVHGFTNDKEDMKPYAMLFHDLGYNVLMPDNEAHGESEGNLIGYGWNDRLNVMAWTDQLIKENPESQI
TLFGLSMGAATVMMASGERLPAQVTSLIEDCGYASVWDELKFQAKAMYNLPAFPLLYEVSALSKIRAGFSYGEASSVKQL
AKNKRPTLFIHGDKDDFVPTKMVYDNYKATKGPKEILIVKGAKHAKSFETNPEQYQKKIAAFLKKVEK

Sequences:

>Translated_308_residues
MKTIRIAKYLGILFLLITLISVGASFYFFHVAQIREEKSFINNKKRSTNNPLYPAEQSFDALPYEKRQLTNRGLKQVGWY
LPAAQKTKKTAIVVHGFTNDKEDMKPYAMLFHDLGYNVLMPDNEAHGESEGNLIGYGWNDRLNVMAWTDQLIKENPESQI
TLFGLSMGAATVMMASGERLPAQVTSLIEDCGYASVWDELKFQAKAMYNLPAFPLLYEVSALSKIRAGFSYGEASSVKQL
AKNKRPTLFIHGDKDDFVPTKMVYDNYKATKGPKEILIVKGAKHAKSFETNPEQYQKKIAAFLKKVEK
>Mature_308_residues
MKTIRIAKYLGILFLLITLISVGASFYFFHVAQIREEKSFINNKKRSTNNPLYPAEQSFDALPYEKRQLTNRGLKQVGWY
LPAAQKTKKTAIVVHGFTNDKEDMKPYAMLFHDLGYNVLMPDNEAHGESEGNLIGYGWNDRLNVMAWTDQLIKENPESQI
TLFGLSMGAATVMMASGERLPAQVTSLIEDCGYASVWDELKFQAKAMYNLPAFPLLYEVSALSKIRAGFSYGEASSVKQL
AKNKRPTLFIHGDKDDFVPTKMVYDNYKATKGPKEILIVKGAKHAKSFETNPEQYQKKIAAFLKKVEK

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001375 [H]

Pfam domain/function: PF00326 Peptidase_S9 [H]

EC number: NA

Molecular weight: Translated: 34846; Mature: 34846

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIRIAKYLGILFLLITLISVGASFYFFHVAQIREEKSFINNKKRSTNNPLYPAEQSFD
CCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
ALPYEKRQLTNRGLKQVGWYLPAAQKTKKTAIVVHGFTNDKEDMKPYAMLFHDLGYNVLM
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEE
PDNEAHGESEGNLIGYGWNDRLNVMAWTDQLIKENPESQITLFGLSMGAATVMMASGERL
CCCCCCCCCCCCEEEECCCCCEEEEEHHHHHHHCCCCCEEEEEEECCCHHHEEEECCCCC
PAQVTSLIEDCGYASVWDELKFQAKAMYNLPAFPLLYEVSALSKIRAGFSYGEASSVKQL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH
AKNKRPTLFIHGDKDDFVPTKMVYDNYKATKGPKEILIVKGAKHAKSFETNPEQYQKKIA
HHCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHH
AFLKKVEK
HHHHHHCC
>Mature Secondary Structure
MKTIRIAKYLGILFLLITLISVGASFYFFHVAQIREEKSFINNKKRSTNNPLYPAEQSFD
CCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
ALPYEKRQLTNRGLKQVGWYLPAAQKTKKTAIVVHGFTNDKEDMKPYAMLFHDLGYNVLM
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEE
PDNEAHGESEGNLIGYGWNDRLNVMAWTDQLIKENPESQITLFGLSMGAATVMMASGERL
CCCCCCCCCCCCEEEECCCCCEEEEEHHHHHHHCCCCCEEEEEEECCCHHHEEEECCCCC
PAQVTSLIEDCGYASVWDELKFQAKAMYNLPAFPLLYEVSALSKIRAGFSYGEASSVKQL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH
AKNKRPTLFIHGDKDDFVPTKMVYDNYKATKGPKEILIVKGAKHAKSFETNPEQYQKKIA
HHCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHH
AFLKKVEK
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]