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The map label for this gene is pepD [H]

Identifier: 71910355

GI number: 71910355

Start: 531514

End: 532911

Strand: Direct

Name: pepD [H]

Synonym: M5005_Spy_0542

Alternate gene names: 71910355

Gene position: 531514-532911 (Clockwise)

Preceding gene: 71910354

Following gene: 71910356

Centisome position: 28.91

GC content: 42.92

Gene sequence:

>1398_bases
ATGGCATGTACAACTATACTCGTCGGTAAAAAGGCATCTTATGATGGCTCAACCATGGTTGCTCGAACAGAAGATTCTCA
AAATGGTGATTTCACGCCTAAAAAAATGATTGTGGTGAAACCAGAAGATCAACCGAGACATTACCGTTCGGTGCAATCTT
CCTTTGAAATGGACTTACCGGACAATCCCATGACTTACACGTCTGTTCCCGATGCGCTTGGTAAAGATGGTATCTGGGCA
GAAGCAGGCGTGAACGAGGCTAATGTGGCCATGTCAGCAACTGAAACCATCACTACCAATTCTCGTGTTTTAGGGGCAGA
TCCTCTAGTAGCTTCTGGTATTGGTGAGGAGGACATGGTGACCTTAGTGCTCCCTTATATCCGTTCTGCGCGTGAAGGGG
TTTTGCGCCTTGGTGCCATTTTAGAAGACTATGGCACTTACGAGTCAAATGGTGTGGCTTTTTCAGATGAACATGACATT
TGGTGGCTGGAAACGATTGGTGGTCATCACTGGATTGCAAGACGGGTGCCAGATGATGCTTATGTCACCAATCCCAATCA
ATTTGGCATTGATCATTTTGAATTTAACAATCCTGAAGATTACCTTTGCTCAGCTGATTTAAAGGACTTTATTGACACGT
ATCACTTAGATTTAACCTATAGCCATGAGCATTTTAATCCGCGCTATGCCTTTGGTAGTCAACGTGACAAAGACCGTCAG
TATAATACGCCACGTGCTTGGATCATGCAAAAATTCTTAAACCCAGAAATTGTGCAAGACCCGCGCAGCTTTGCCCTTGC
TTGGTGTCAAAAACCTTACCGTAAAATAACAGTAGAAGATGTCAAATATGTATTGAGTAGTCACTATCAGGACACGGGTT
ATGACCCTTACGGTTCAGAAGGAACTCCTGTTAGTAAGAAAGTCTTTCGCCCTATTGGCATTAACCGTACCAGCCAAACC
GCTATCTTACACATTCGTCCTAATAAACCTCAAGAAATTGCCGCTATTCAATGGATGGCTTATGGGTCAATGCCATTTAA
TACCATGGTGCCTTTTTTCACACAGGTGAAGACTATTCCAGATTATTTTGCCAACACTTACGAAAATGTGTTTACCGACA
ATTTCTATTGGACCAACCGTCTGATTGCGGCTTTGGCAGATCCTCACTACAATCATCATGAAACTGATTTGGACAATTAC
TTGGAAGAAACCATGGCAAAAGGTCATGCCATGTTACATGCTGTGGAAGCACAGTTATTGGCTGGTGAAACAGTCGATTT
GGAAGAGGAAAATCAAAAAATGAGTGACTATGTGCAAGGAGAAACGCAGACGCTGTTGAACAAGATTCTCTTTGACGCTA
GCAATCTAATGACCAATCGTTTCAGTTTGAGCGATTAA

Upstream 100 bases:

>100_bases
GATTTTTTTGTCTAAAAGTCGTTTTCCATTGTTTTTTTGAAGTGTCTGATGTTCTGTGATATGATAAAAGGGATAATAAC
GTTTGTAAAGGAGACTGATA

Downstream 100 bases:

>100_bases
TAGTGAAGCTAAGGCTGAGCAACTGCTTAGCCTTTTTTACGATAACTTTTTAGGAAAAGTAATCGCAAAAAGACAAAAAC
TTGGAAAAAAAATCAAAGTA

Product: dipeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 464

Protein sequence:

>465_residues
MACTTILVGKKASYDGSTMVARTEDSQNGDFTPKKMIVVKPEDQPRHYRSVQSSFEMDLPDNPMTYTSVPDALGKDGIWA
EAGVNEANVAMSATETITTNSRVLGADPLVASGIGEEDMVTLVLPYIRSAREGVLRLGAILEDYGTYESNGVAFSDEHDI
WWLETIGGHHWIARRVPDDAYVTNPNQFGIDHFEFNNPEDYLCSADLKDFIDTYHLDLTYSHEHFNPRYAFGSQRDKDRQ
YNTPRAWIMQKFLNPEIVQDPRSFALAWCQKPYRKITVEDVKYVLSSHYQDTGYDPYGSEGTPVSKKVFRPIGINRTSQT
AILHIRPNKPQEIAAIQWMAYGSMPFNTMVPFFTQVKTIPDYFANTYENVFTDNFYWTNRLIAALADPHYNHHETDLDNY
LEETMAKGHAMLHAVEAQLLAGETVDLEEENQKMSDYVQGETQTLLNKILFDASNLMTNRFSLSD

Sequences:

>Translated_465_residues
MACTTILVGKKASYDGSTMVARTEDSQNGDFTPKKMIVVKPEDQPRHYRSVQSSFEMDLPDNPMTYTSVPDALGKDGIWA
EAGVNEANVAMSATETITTNSRVLGADPLVASGIGEEDMVTLVLPYIRSAREGVLRLGAILEDYGTYESNGVAFSDEHDI
WWLETIGGHHWIARRVPDDAYVTNPNQFGIDHFEFNNPEDYLCSADLKDFIDTYHLDLTYSHEHFNPRYAFGSQRDKDRQ
YNTPRAWIMQKFLNPEIVQDPRSFALAWCQKPYRKITVEDVKYVLSSHYQDTGYDPYGSEGTPVSKKVFRPIGINRTSQT
AILHIRPNKPQEIAAIQWMAYGSMPFNTMVPFFTQVKTIPDYFANTYENVFTDNFYWTNRLIAALADPHYNHHETDLDNY
LEETMAKGHAMLHAVEAQLLAGETVDLEEENQKMSDYVQGETQTLLNKILFDASNLMTNRFSLSD
>Mature_464_residues
ACTTILVGKKASYDGSTMVARTEDSQNGDFTPKKMIVVKPEDQPRHYRSVQSSFEMDLPDNPMTYTSVPDALGKDGIWAE
AGVNEANVAMSATETITTNSRVLGADPLVASGIGEEDMVTLVLPYIRSAREGVLRLGAILEDYGTYESNGVAFSDEHDIW
WLETIGGHHWIARRVPDDAYVTNPNQFGIDHFEFNNPEDYLCSADLKDFIDTYHLDLTYSHEHFNPRYAFGSQRDKDRQY
NTPRAWIMQKFLNPEIVQDPRSFALAWCQKPYRKITVEDVKYVLSSHYQDTGYDPYGSEGTPVSKKVFRPIGINRTSQTA
ILHIRPNKPQEIAAIQWMAYGSMPFNTMVPFFTQVKTIPDYFANTYENVFTDNFYWTNRLIAALADPHYNHHETDLDNYL
EETMAKGHAMLHAVEAQLLAGETVDLEEENQKMSDYVQGETQTLLNKILFDASNLMTNRFSLSD

Specific function: Unknown

COG id: COG4690

COG function: function code E; Dipeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C69 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005322 [H]

Pfam domain/function: PF03577 Peptidase_C69 [H]

EC number: NA

Molecular weight: Translated: 52896; Mature: 52764

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MACTTILVGKKASYDGSTMVARTEDSQNGDFTPKKMIVVKPEDQPRHYRSVQSSFEMDLP
CCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCC
DNPMTYTSVPDALGKDGIWAEAGVNEANVAMSATETITTNSRVLGADPLVASGIGEEDMV
CCCCEECCCCHHHCCCCCEECCCCCCCCEEEECCCEEECCCEEECCCCHHHCCCCCCHHH
TLVLPYIRSAREGVLRLGAILEDYGTYESNGVAFSDEHDIWWLETIGGHHWIARRVPDDA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEECCCCEEEEECCCCCC
YVTNPNQFGIDHFEFNNPEDYLCSADLKDFIDTYHLDLTYSHEHFNPRYAFGSQRDKDRQ
EEECCCCCCCCCEECCCCHHHEECCHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCC
YNTPRAWIMQKFLNPEIVQDPRSFALAWCQKPYRKITVEDVKYVLSSHYQDTGYDPYGSE
CCCCHHHHHHHHCCCHHHCCHHHHHHHHHHCHHHEECHHHHHHHHHHCCCCCCCCCCCCC
GTPVSKKVFRPIGINRTSQTAILHIRPNKPQEIAAIQWMAYGSMPFNTMVPFFTQVKTIP
CCCCHHHHHCCCCCCCCCCEEEEEECCCCCCHHEEEEEEEECCCCHHHHHHHHHHHHHHH
DYFANTYENVFTDNFYWTNRLIAALADPHYNHHETDLDNYLEETMAKGHAMLHAVEAQLL
HHHHHHHHHHHCCCEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AGETVDLEEENQKMSDYVQGETQTLLNKILFDASNLMTNRFSLSD
CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ACTTILVGKKASYDGSTMVARTEDSQNGDFTPKKMIVVKPEDQPRHYRSVQSSFEMDLP
CCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCC
DNPMTYTSVPDALGKDGIWAEAGVNEANVAMSATETITTNSRVLGADPLVASGIGEEDMV
CCCCEECCCCHHHCCCCCEECCCCCCCCEEEECCCEEECCCEEECCCCHHHCCCCCCHHH
TLVLPYIRSAREGVLRLGAILEDYGTYESNGVAFSDEHDIWWLETIGGHHWIARRVPDDA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEECCCCEEEEECCCCCC
YVTNPNQFGIDHFEFNNPEDYLCSADLKDFIDTYHLDLTYSHEHFNPRYAFGSQRDKDRQ
EEECCCCCCCCCEECCCCHHHEECCHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCC
YNTPRAWIMQKFLNPEIVQDPRSFALAWCQKPYRKITVEDVKYVLSSHYQDTGYDPYGSE
CCCCHHHHHHHHCCCHHHCCHHHHHHHHHHCHHHEECHHHHHHHHHHCCCCCCCCCCCCC
GTPVSKKVFRPIGINRTSQTAILHIRPNKPQEIAAIQWMAYGSMPFNTMVPFFTQVKTIP
CCCCHHHHHCCCCCCCCCCEEEEEECCCCCCHHEEEEEEEECCCCHHHHHHHHHHHHHHH
DYFANTYENVFTDNFYWTNRLIAALADPHYNHHETDLDNYLEETMAKGHAMLHAVEAQLL
HHHHHHHHHHHCCCEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AGETVDLEEENQKMSDYVQGETQTLLNKILFDASNLMTNRFSLSD
CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11296296 [H]