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The map label for this gene is dinG [H]

Identifier: 71910349

GI number: 71910349

Start: 522841

End: 525300

Strand: Direct

Name: dinG [H]

Synonym: M5005_Spy_0536

Alternate gene names: 71910349

Gene position: 522841-525300 (Clockwise)

Preceding gene: 71910348

Following gene: 71910350

Centisome position: 28.44

GC content: 38.33

Gene sequence:

>2460_bases
ATGACCCAGAAAAAACTTAGAAAATATGCAGTAGTTGACTTGGAGGCTACTGGAGCAGGTCCCAATGCTTCTATTATTCA
GGTTGGGATTGTTATTATCCAAGGAAATAAAATTATTGATAGTTATGAAACAGATGTTAATCCTCATGAATCTTTGGATG
AGCATATTGTTCATTTGACAGGTATTACGGATAAGCAGTTGGCTAAAGCTCCGGATTTTGGTCAAGTGGCGCATCACATT
TATCAATTGATTGAAGATTGTATTTTTGTTGCCCACAATGTAAAGTTCGATGCAAATTTATTGGCAGAAGCTCTTTTTTT
AGAAGGATATGAGTTAACAATACCACGTGTTGATACTGTTGAATTAGCCCAACTATTTTTCCCTCGCTTTGAAAAGTATA
ACCTTAGTCACCTATCTAGGCAGCTCAATATTGATTTGGCAGAAGCTCATACTGCTATTGCAGATGCAAGAGCTACAGCT
ATACTGTTTTTAAGACTTTTACAAAAAATTGAGAGCCTTCCAATTGAGTGCTTAGAAAGCTTATTAGTCTATTCAGATAG
CCTGCTATTTGAAACAGCAATGGTCATTCAAGAAGGATTAGCCAAAGCCAAACCTTATGATCCCAACAAATACATTAAAA
TCAGACAGATTCTCTTACCAAAGGGCTCAAAAGCTCTCAAGCCTTATCAAATATCAAAAAGCTTCCCTATTAATATGGCA
CTATTAGGTCTGGAAGAAAGGCCTAAACAGACTCAATTTGCTCAGTTAATTGACGAAGATTACCATCAGGGAGTAGCTAG
TTTTATTGAAGCTCAGACAGGTATTGGAAAAACCTACGGCTACCTGCTACCCCTTTTGGCAAAAGAAGATCAAAACCAAA
TCATTGTCAGTGTGCCCACCAAACTTCTTCAAGACCAATTAATGGCTGGTGAAGTAGCTGCTATTCAAGAACAATTTCAC
ATCGCCTGCCATAGTTTAAAAGGGCCCGCCAATTACCTAAAGCTAGATAGCTTTGCAGATAGTTTGGACCAAAATGACCA
GAACCGTTTGGTGAATCGTTATAAAATGCAATTATTGGTTTGGCTCTTAGAAACTAAGACAGGAGACCTTGACGAAATCA
AACAAAAGCAGCGCTTTGCAGCTTATTTTGAGCAGCTTAAGCACGATGGAGACATTAAGCAGTCTTCTGAATTTTACGAT
TACGATTTTTGGAGAGTTAGTTATGAAAAAGCCAAAACAGCCCGTCTCCTGATTACCAACCATGCTTATTTTTTACACCG
TGTTCAAGATGACAAGGACTTTGCTAGAAACAAGGTCTTGGTCTTTGATGAGGCCCAAAAGCTGATGCTCCAATTAGATC
AATTATCACGTCATCAGCTTAACCTGACGGTTTTTTTACAAACAATACAGGCCAAGTTAAGCAACCCTTTACCTCTTTTA
GAAAAACGCTTATTGGAAAGCTTGTCGTTTGAACTGGGACAAGTGTCAAGTGATTACTATCAAAATAAAGAGCACCAGCT
TGCTCATGATTGGTCTCGTATAGCTGGCTACGCCAAAGAATTAACAGGAGCAGATTATCAAGAGTTACAAGCCTTTTTTG
CTACCTCAGATGGTGACTACTGGCTTAGTAGCGAAAAGCAAGAGGAGAAGCGAGTGACTTATCTAAACAGTGCTAGTAAG
GCATTTATTCATTTCCAACAGCTCTTACCAGAAACGGTGAAAACTTATTTTGTTTCTGCCACTTTAACCATCAGCTCAGA
AGTAACCTTGGCAGACCTATTAGGTTTTGAAGAGTATCTCTATCATGTCATTGAAAAGGATAAAAAGCAAGACCAGTTGG
TGCTTGTTGATCAAGAGGCGCCTATCGTGACAGAAGTCAGTGACCAAATCTATGTGGAAGCAATTGCAAAACGAATCGAA
AGCTTGAAGCAAGAGGGTTATCCTATTTTAGTGCTTTTTAATTCTAAAAAACACTTGCTGTTGGTTTCAGACTATCTAGA
CCAATGGCAGGTGCCTCACTTAGCGCAGGAAAAGAATGGAACAGCTTATAATATTAAAAAACGGTTTGATCAAGGAGAGC
AAACTATTTTGCTTGGTTTAGGTTCTTTTTGGGAAGGAGTTGATTTTATTCAAGCGGATCGTATGATTACCCTTATCGCA
CGATTGCCCTTTGATAACCCAGAGGATTTCTTTGTTAAGAAAATGAGTCATTATCTATTGGAAAAAGGTAAAAATCCTTT
CAGAGATTACTTCTTGCCAATGACTATTTTGCGATTAAAACAGGCTATTGGTCGCACGATGCGTCGACAAGATCAAAAGT
CAGTGGTTATTATTTTGGATCGTCGTCTCCTTACAAAGTCCTATGGACAAGTTATTTTGGAAGGTCTCGGTCAGGAATTT
TTGATTTCTCAACAAAATTTTCACGATTGTCTAGTAGAAACGGACTGTTTTCTGATATAA

Upstream 100 bases:

>100_bases
AGTATAAAAAATTATCCTATCTTGGTTATTGGAGTGATGGCACCTTTGAGGTATAGTCATGTTTTGTTTTATAGATATAG
CGTGCTATAATAGACTTACT

Downstream 100 bases:

>100_bases
TGGAAAGGATCTATTATATCAGAAAAATTTTTAATGGCGTTAAGCACAATCAACTAACATTTAAATTAGTTTGAACTTTT
ATTATGCTCTTTTAGACAAC

Product: bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 819; Mature: 818

Protein sequence:

>819_residues
MTQKKLRKYAVVDLEATGAGPNASIIQVGIVIIQGNKIIDSYETDVNPHESLDEHIVHLTGITDKQLAKAPDFGQVAHHI
YQLIEDCIFVAHNVKFDANLLAEALFLEGYELTIPRVDTVELAQLFFPRFEKYNLSHLSRQLNIDLAEAHTAIADARATA
ILFLRLLQKIESLPIECLESLLVYSDSLLFETAMVIQEGLAKAKPYDPNKYIKIRQILLPKGSKALKPYQISKSFPINMA
LLGLEERPKQTQFAQLIDEDYHQGVASFIEAQTGIGKTYGYLLPLLAKEDQNQIIVSVPTKLLQDQLMAGEVAAIQEQFH
IACHSLKGPANYLKLDSFADSLDQNDQNRLVNRYKMQLLVWLLETKTGDLDEIKQKQRFAAYFEQLKHDGDIKQSSEFYD
YDFWRVSYEKAKTARLLITNHAYFLHRVQDDKDFARNKVLVFDEAQKLMLQLDQLSRHQLNLTVFLQTIQAKLSNPLPLL
EKRLLESLSFELGQVSSDYYQNKEHQLAHDWSRIAGYAKELTGADYQELQAFFATSDGDYWLSSEKQEEKRVTYLNSASK
AFIHFQQLLPETVKTYFVSATLTISSEVTLADLLGFEEYLYHVIEKDKKQDQLVLVDQEAPIVTEVSDQIYVEAIAKRIE
SLKQEGYPILVLFNSKKHLLLVSDYLDQWQVPHLAQEKNGTAYNIKKRFDQGEQTILLGLGSFWEGVDFIQADRMITLIA
RLPFDNPEDFFVKKMSHYLLEKGKNPFRDYFLPMTILRLKQAIGRTMRRQDQKSVVIILDRRLLTKSYGQVILEGLGQEF
LISQQNFHDCLVETDCFLI

Sequences:

>Translated_819_residues
MTQKKLRKYAVVDLEATGAGPNASIIQVGIVIIQGNKIIDSYETDVNPHESLDEHIVHLTGITDKQLAKAPDFGQVAHHI
YQLIEDCIFVAHNVKFDANLLAEALFLEGYELTIPRVDTVELAQLFFPRFEKYNLSHLSRQLNIDLAEAHTAIADARATA
ILFLRLLQKIESLPIECLESLLVYSDSLLFETAMVIQEGLAKAKPYDPNKYIKIRQILLPKGSKALKPYQISKSFPINMA
LLGLEERPKQTQFAQLIDEDYHQGVASFIEAQTGIGKTYGYLLPLLAKEDQNQIIVSVPTKLLQDQLMAGEVAAIQEQFH
IACHSLKGPANYLKLDSFADSLDQNDQNRLVNRYKMQLLVWLLETKTGDLDEIKQKQRFAAYFEQLKHDGDIKQSSEFYD
YDFWRVSYEKAKTARLLITNHAYFLHRVQDDKDFARNKVLVFDEAQKLMLQLDQLSRHQLNLTVFLQTIQAKLSNPLPLL
EKRLLESLSFELGQVSSDYYQNKEHQLAHDWSRIAGYAKELTGADYQELQAFFATSDGDYWLSSEKQEEKRVTYLNSASK
AFIHFQQLLPETVKTYFVSATLTISSEVTLADLLGFEEYLYHVIEKDKKQDQLVLVDQEAPIVTEVSDQIYVEAIAKRIE
SLKQEGYPILVLFNSKKHLLLVSDYLDQWQVPHLAQEKNGTAYNIKKRFDQGEQTILLGLGSFWEGVDFIQADRMITLIA
RLPFDNPEDFFVKKMSHYLLEKGKNPFRDYFLPMTILRLKQAIGRTMRRQDQKSVVIILDRRLLTKSYGQVILEGLGQEF
LISQQNFHDCLVETDCFLI
>Mature_818_residues
TQKKLRKYAVVDLEATGAGPNASIIQVGIVIIQGNKIIDSYETDVNPHESLDEHIVHLTGITDKQLAKAPDFGQVAHHIY
QLIEDCIFVAHNVKFDANLLAEALFLEGYELTIPRVDTVELAQLFFPRFEKYNLSHLSRQLNIDLAEAHTAIADARATAI
LFLRLLQKIESLPIECLESLLVYSDSLLFETAMVIQEGLAKAKPYDPNKYIKIRQILLPKGSKALKPYQISKSFPINMAL
LGLEERPKQTQFAQLIDEDYHQGVASFIEAQTGIGKTYGYLLPLLAKEDQNQIIVSVPTKLLQDQLMAGEVAAIQEQFHI
ACHSLKGPANYLKLDSFADSLDQNDQNRLVNRYKMQLLVWLLETKTGDLDEIKQKQRFAAYFEQLKHDGDIKQSSEFYDY
DFWRVSYEKAKTARLLITNHAYFLHRVQDDKDFARNKVLVFDEAQKLMLQLDQLSRHQLNLTVFLQTIQAKLSNPLPLLE
KRLLESLSFELGQVSSDYYQNKEHQLAHDWSRIAGYAKELTGADYQELQAFFATSDGDYWLSSEKQEEKRVTYLNSASKA
FIHFQQLLPETVKTYFVSATLTISSEVTLADLLGFEEYLYHVIEKDKKQDQLVLVDQEAPIVTEVSDQIYVEAIAKRIES
LKQEGYPILVLFNSKKHLLLVSDYLDQWQVPHLAQEKNGTAYNIKKRFDQGEQTILLGLGSFWEGVDFIQADRMITLIAR
LPFDNPEDFFVKKMSHYLLEKGKNPFRDYFLPMTILRLKQAIGRTMRRQDQKSVVIILDRRLLTKSYGQVILEGLGQEFL
ISQQNFHDCLVETDCFLI

Specific function: Probable helicase involved in DNA repair and perhaps also replication [H]

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1788110, Length=629, Percent_Identity=24.0063593004769, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI1787018, Length=172, Percent_Identity=33.7209302325581, Blast_Score=70, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006054
- InterPro:   IPR006310
- InterPro:   IPR006055
- InterPro:   IPR013520
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR001650
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00929 Exonuc_X-T [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 94072; Mature: 93941

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQKKLRKYAVVDLEATGAGPNASIIQVGIVIIQGNKIIDSYETDVNPHESLDEHIVHLT
CCHHHHHHEEEEEEEECCCCCCCCEEEEEEEEEECCEEEECCCCCCCCHHHHHHHEEEEE
GITDKQLAKAPDFGQVAHHIYQLIEDCIFVAHNVKFDANLLAEALFLEGYELTIPRVDTV
CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEECCCCCHH
ELAQLFFPRFEKYNLSHLSRQLNIDLAEAHTAIADARATAILFLRLLQKIESLPIECLES
HHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LLVYSDSLLFETAMVIQEGLAKAKPYDPNKYIKIRQILLPKGSKALKPYQISKSFPINMA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCEECCCCCCCEEE
LLGLEERPKQTQFAQLIDEDYHQGVASFIEAQTGIGKTYGYLLPLLAKEDQNQIIVSVPT
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEECCH
KLLQDQLMAGEVAAIQEQFHIACHSLKGPANYLKLDSFADSLDQNDQNRLVNRYKMQLLV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
WLLETKTGDLDEIKQKQRFAAYFEQLKHDGDIKQSSEFYDYDFWRVSYEKAKTARLLITN
HHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHCCCEEEEEEC
HAYFLHRVQDDKDFARNKVLVFDEAQKLMLQLDQLSRHQLNLTVFLQTIQAKLSNPLPLL
CCEEEEEECCCHHHHHCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
EKRLLESLSFELGQVSSDYYQNKEHQLAHDWSRIAGYAKELTGADYQELQAFFATSDGDY
HHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCE
WLSSEKQEEKRVTYLNSASKAFIHFQQLLPETVKTYFVSATLTISSEVTLADLLGFEEYL
ECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHH
YHVIEKDKKQDQLVLVDQEAPIVTEVSDQIYVEAIAKRIESLKQEGYPILVLFNSKKHLL
HHHHHCCCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEE
LVSDYLDQWQVPHLAQEKNGTAYNIKKRFDQGEQTILLGLGSFWEGVDFIQADRMITLIA
EEEHHHHCCCCCCHHHCCCCCEEEHHHHCCCCCCEEEEECCHHHCCCHHHHHHHHHHHHH
RLPFDNPEDFFVKKMSHYLLEKGKNPFRDYFLPMTILRLKQAIGRTMRRQDQKSVVIILD
HCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
RRLLTKSYGQVILEGLGQEFLISQQNFHDCLVETDCFLI
HHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHCCCCCCC
>Mature Secondary Structure 
TQKKLRKYAVVDLEATGAGPNASIIQVGIVIIQGNKIIDSYETDVNPHESLDEHIVHLT
CHHHHHHEEEEEEEECCCCCCCCEEEEEEEEEECCEEEECCCCCCCCHHHHHHHEEEEE
GITDKQLAKAPDFGQVAHHIYQLIEDCIFVAHNVKFDANLLAEALFLEGYELTIPRVDTV
CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEECCCCCHH
ELAQLFFPRFEKYNLSHLSRQLNIDLAEAHTAIADARATAILFLRLLQKIESLPIECLES
HHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LLVYSDSLLFETAMVIQEGLAKAKPYDPNKYIKIRQILLPKGSKALKPYQISKSFPINMA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCEECCCCCCCEEE
LLGLEERPKQTQFAQLIDEDYHQGVASFIEAQTGIGKTYGYLLPLLAKEDQNQIIVSVPT
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEECCH
KLLQDQLMAGEVAAIQEQFHIACHSLKGPANYLKLDSFADSLDQNDQNRLVNRYKMQLLV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
WLLETKTGDLDEIKQKQRFAAYFEQLKHDGDIKQSSEFYDYDFWRVSYEKAKTARLLITN
HHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHCCCEEEEEEC
HAYFLHRVQDDKDFARNKVLVFDEAQKLMLQLDQLSRHQLNLTVFLQTIQAKLSNPLPLL
CCEEEEEECCCHHHHHCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
EKRLLESLSFELGQVSSDYYQNKEHQLAHDWSRIAGYAKELTGADYQELQAFFATSDGDY
HHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCE
WLSSEKQEEKRVTYLNSASKAFIHFQQLLPETVKTYFVSATLTISSEVTLADLLGFEEYL
ECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHHHHH
YHVIEKDKKQDQLVLVDQEAPIVTEVSDQIYVEAIAKRIESLKQEGYPILVLFNSKKHLL
HHHHHCCCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEE
LVSDYLDQWQVPHLAQEKNGTAYNIKKRFDQGEQTILLGLGSFWEGVDFIQADRMITLIA
EEEHHHHCCCCCCHHHCCCCCEEEHHHHCCCCCCEEEEECCHHHCCCHHHHHHHHHHHHH
RLPFDNPEDFFVKKMSHYLLEKGKNPFRDYFLPMTILRLKQAIGRTMRRQDQKSVVIILD
HCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
RRLLTKSYGQVILEGLGQEFLISQQNFHDCLVETDCFLI
HHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA