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The map label for this gene is tldD [H]

Identifier: 71892079

GI number: 71892079

Start: 355310

End: 356773

Strand: Direct

Name: tldD [H]

Synonym: BPEN_305

Alternate gene names: 71892079

Gene position: 355310-356773 (Clockwise)

Preceding gene: 71892078

Following gene: 71892080

Centisome position: 44.88

GC content: 35.86

Gene sequence:

>1464_bases
ATGAACTTAGATTTTGTGATTGAAAGACTACTCGCACCTAATAATTTGCAATATAATGATCTTTTATATTTATTAGATAT
GACAGAAAAATTCCAAATAGATTACTCAGATCTATATTTTCAATCATACTGTCATGAAACATGGGCTCTTGAAGAGAGTA
TCATTAAATCTGGGTCCTACACAATAGATCAGGGCGCTGGTGCACGAGTAATCATAGGCGAACAAACTGGGTTTGCTTAC
ACCGACCAATTAACTCTAGACGCATTAATGCGTAGCATGAAAGCTGCTACCAGCATTACAAACGAACGTCATTGCAATAA
CAATATTACTACTGTTGATTTAAAGGAACATAAAGATATTTATCCTACTGCATATTCCTATATGAATCCACTGTCTAATA
TATCTAAGGAAGAAAAAATTGAACTATTAATGAGGATAGATAAAATAGCACGTGCTACTGATTCTAGAGTACAAAAAGTT
AATGCCAGTTTATCAGGTGTTTATGAACAAATTTTAGTAGCAGCTACAGATGGTACTTTATCCGCAGATGTTCGACCGTT
AGTACGTTTATCTATATTAGTGCAATCAGAACAAGATGGGAAAAGAGAACAAGGAATAAGTGGTGGCGGCGGGAGATTTG
GGTACGATTTTTTTTTAGATACTATCGCAGAAGGAGAAATTCGAGCCGATTGTTGGACCAAAGATGCTGTTCAAATGAGT
TTAATTAATCTTGAAGCTGTAGCAGCTCCAGCAGGAACTATGACAGTAGTTTTGGGATCAGGTTGGCCTGGTATTTTATT
GCATGAAGCGGTAGGGCATGGTCTAGAAGGAGATTTTAATAGAAGAGGTAGTTCGGTATTTTCTAACAAAATCGGAAAAA
TAGTAGCTTCAGAATTATGTACAATAGTAGATGATGCTACATTGAAGGGATCACGTGGATCATTAACTATTGATGATGAA
GGAATACCTGGTCAATATAATATTTTGATTAAAAATGGTATCTTACAAGGATACATGCAGGATAAATTAAATGCTAAACT
AATGGGATGCACCTCGACAGGAAACGGTAGAAGAGAATCATATGCTTCTTTACCTATGCCGCGTATGACTAACACCTATA
TGTTGCCAGGTCAATCGACTCCAGAAGAAATTATCGACAGTGTAGATTACGGAGTATATGCTACGAATTTTAGCGGAGGA
CAAGTAGATATTACATCGGGCAAGTTTGTTTTTTCTACATCTGAAGCTTTCCTAATAGAAAAAGGTCGCATCACTAAATC
TATAAAAGGAGCTACTTTAATAGGATCAGGTATCGAAATCATGAAAAGTGTTTCCATGGTTGGCAACGATCTATCCTTAG
ATAAAGGAGTAGGAATATGTATAAAAAACGGACAAAACATACCTGTTAGCGTCGGTCAACCAACAATAAAATTAAATAAT
ATCACTATTGGGGGTACTAATTAA

Upstream 100 bases:

>100_bases
CTTAAATAAAAACATATAAAATTATTAAAAGTACATATTCTAAAAATTCTTGCCAAATTGGCGGGGTACATACTAATATC
ATATTTTAAATAGAGGTTAT

Downstream 100 bases:

>100_bases
TTAAATTGTATGCATGATACATACCCATAGCATTAAATAACAACAATCAAATAATAATAATGTAATTATATTAAATATTA
TTAAATTATGTGTAACTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 487; Mature: 487

Protein sequence:

>487_residues
MNLDFVIERLLAPNNLQYNDLLYLLDMTEKFQIDYSDLYFQSYCHETWALEESIIKSGSYTIDQGAGARVIIGEQTGFAY
TDQLTLDALMRSMKAATSITNERHCNNNITTVDLKEHKDIYPTAYSYMNPLSNISKEEKIELLMRIDKIARATDSRVQKV
NASLSGVYEQILVAATDGTLSADVRPLVRLSILVQSEQDGKREQGISGGGGRFGYDFFLDTIAEGEIRADCWTKDAVQMS
LINLEAVAAPAGTMTVVLGSGWPGILLHEAVGHGLEGDFNRRGSSVFSNKIGKIVASELCTIVDDATLKGSRGSLTIDDE
GIPGQYNILIKNGILQGYMQDKLNAKLMGCTSTGNGRRESYASLPMPRMTNTYMLPGQSTPEEIIDSVDYGVYATNFSGG
QVDITSGKFVFSTSEAFLIEKGRITKSIKGATLIGSGIEIMKSVSMVGNDLSLDKGVGICIKNGQNIPVSVGQPTIKLNN
ITIGGTN

Sequences:

>Translated_487_residues
MNLDFVIERLLAPNNLQYNDLLYLLDMTEKFQIDYSDLYFQSYCHETWALEESIIKSGSYTIDQGAGARVIIGEQTGFAY
TDQLTLDALMRSMKAATSITNERHCNNNITTVDLKEHKDIYPTAYSYMNPLSNISKEEKIELLMRIDKIARATDSRVQKV
NASLSGVYEQILVAATDGTLSADVRPLVRLSILVQSEQDGKREQGISGGGGRFGYDFFLDTIAEGEIRADCWTKDAVQMS
LINLEAVAAPAGTMTVVLGSGWPGILLHEAVGHGLEGDFNRRGSSVFSNKIGKIVASELCTIVDDATLKGSRGSLTIDDE
GIPGQYNILIKNGILQGYMQDKLNAKLMGCTSTGNGRRESYASLPMPRMTNTYMLPGQSTPEEIIDSVDYGVYATNFSGG
QVDITSGKFVFSTSEAFLIEKGRITKSIKGATLIGSGIEIMKSVSMVGNDLSLDKGVGICIKNGQNIPVSVGQPTIKLNN
ITIGGTN
>Mature_487_residues
MNLDFVIERLLAPNNLQYNDLLYLLDMTEKFQIDYSDLYFQSYCHETWALEESIIKSGSYTIDQGAGARVIIGEQTGFAY
TDQLTLDALMRSMKAATSITNERHCNNNITTVDLKEHKDIYPTAYSYMNPLSNISKEEKIELLMRIDKIARATDSRVQKV
NASLSGVYEQILVAATDGTLSADVRPLVRLSILVQSEQDGKREQGISGGGGRFGYDFFLDTIAEGEIRADCWTKDAVQMS
LINLEAVAAPAGTMTVVLGSGWPGILLHEAVGHGLEGDFNRRGSSVFSNKIGKIVASELCTIVDDATLKGSRGSLTIDDE
GIPGQYNILIKNGILQGYMQDKLNAKLMGCTSTGNGRRESYASLPMPRMTNTYMLPGQSTPEEIIDSVDYGVYATNFSGG
QVDITSGKFVFSTSEAFLIEKGRITKSIKGATLIGSGIEIMKSVSMVGNDLSLDKGVGICIKNGQNIPVSVGQPTIKLNN
ITIGGTN

Specific function: Suppresses the inhibitory activity of the carbon storage regulator (CsrA) [H]

COG id: COG0312

COG function: function code R; Predicted Zn-dependent proteases and their inactivated homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U62 family [H]

Homologues:

Organism=Escherichia coli, GI1789640, Length=486, Percent_Identity=66.2551440329218, Blast_Score=652, Evalue=0.0,
Organism=Escherichia coli, GI1790682, Length=394, Percent_Identity=22.3350253807107, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002510 [H]

Pfam domain/function: PF01523 PmbA_TldD [H]

EC number: NA

Molecular weight: Translated: 52958; Mature: 52958

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLDFVIERLLAPNNLQYNDLLYLLDMTEKFQIDYSDLYFQSYCHETWALEESIIKSGSY
CCHHHHHHHHHCCCCCCCCCEEEEEECCHHEECCHHHHHHHHHHHHHHHHHHHHHHCCCE
TIDQGAGARVIIGEQTGFAYTDQLTLDALMRSMKAATSITNERHCNNNITTVDLKEHKDI
EEECCCCEEEEEECCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCC
YPTAYSYMNPLSNISKEEKIELLMRIDKIARATDSRVQKVNASLSGVYEQILVAATDGTL
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCC
SADVRPLVRLSILVQSEQDGKREQGISGGGGRFGYDFFLDTIAEGEIRADCWTKDAVQMS
CCCCHHHEEEEEEEECCCCCHHHCCCCCCCCCCCHHHHHHHHCCCCEEECCCCCCHHEEE
LINLEAVAAPAGTMTVVLGSGWPGILLHEAVGHGLEGDFNRRGSSVFSNKIGKIVASELC
EEEEEEEECCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
TIVDDATLKGSRGSLTIDDEGIPGQYNILIKNGILQGYMQDKLNAKLMGCTSTGNGRRES
HHHCCCEECCCCCCEEECCCCCCCEEEEEEECCHHHHHHHHCCCCEEEEEECCCCCCCHH
YASLPMPRMTNTYMLPGQSTPEEIIDSVDYGVYATNFSGGQVDITSGKFVFSTSEAFLIE
HHCCCCCCCCCEEECCCCCCHHHHHHHCCCCEEEEECCCCEEEEECCEEEEECCCEEEEE
KGRITKSIKGATLIGSGIEIMKSVSMVGNDLSLDKGVGICIKNGQNIPVSVGQPTIKLNN
CCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCEECCCCEEEEEE
ITIGGTN
EEECCCC
>Mature Secondary Structure
MNLDFVIERLLAPNNLQYNDLLYLLDMTEKFQIDYSDLYFQSYCHETWALEESIIKSGSY
CCHHHHHHHHHCCCCCCCCCEEEEEECCHHEECCHHHHHHHHHHHHHHHHHHHHHHCCCE
TIDQGAGARVIIGEQTGFAYTDQLTLDALMRSMKAATSITNERHCNNNITTVDLKEHKDI
EEECCCCEEEEEECCCCCEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCC
YPTAYSYMNPLSNISKEEKIELLMRIDKIARATDSRVQKVNASLSGVYEQILVAATDGTL
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCC
SADVRPLVRLSILVQSEQDGKREQGISGGGGRFGYDFFLDTIAEGEIRADCWTKDAVQMS
CCCCHHHEEEEEEEECCCCCHHHCCCCCCCCCCCHHHHHHHHCCCCEEECCCCCCHHEEE
LINLEAVAAPAGTMTVVLGSGWPGILLHEAVGHGLEGDFNRRGSSVFSNKIGKIVASELC
EEEEEEEECCCCEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
TIVDDATLKGSRGSLTIDDEGIPGQYNILIKNGILQGYMQDKLNAKLMGCTSTGNGRRES
HHHCCCEECCCCCCEEECCCCCCCEEEEEEECCHHHHHHHHCCCCEEEEEECCCCCCCHH
YASLPMPRMTNTYMLPGQSTPEEIIDSVDYGVYATNFSGGQVDITSGKFVFSTSEAFLIE
HHCCCCCCCCCEEECCCCCCHHHHHHHCCCCEEEEECCCCEEEEECCEEEEECCCEEEEE
KGRITKSIKGATLIGSGIEIMKSVSMVGNDLSLDKGVGICIKNGQNIPVSVGQPTIKLNN
CCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCEECCCCEEEEEE
ITIGGTN
EEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]