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The map label for this gene is mreD [H]

Identifier: 71892078

GI number: 71892078

Start: 354421

End: 354900

Strand: Direct

Name: mreD [H]

Synonym: BPEN_304

Alternate gene names: 71892078

Gene position: 354421-354900 (Clockwise)

Preceding gene: 71892077

Following gene: 71892079

Centisome position: 44.77

GC content: 29.17

Gene sequence:

>480_bases
ATGTACAATAAATTCAACAATTATAAATTGTGGGTAGTATACAGTTCCTTTATAATTGCAATTTTTTTACAAACTATTCC
CTTTTATCCTCGAATATGGAATGTGCATCCATCCTGGACAATGATATTGTTAATTCGTTGGATTACGATACTTCCAAATC
AGGTAAACATCGGTACTGGATTTGCTTTAGGATTAATAATCGATATTATACTAGGCTCTACTTTAGGAATACACTCTTTA
TCTTTAAGCATACTTGCTTATTTAGTAAGCCGAAACATTTATTTTTTTAGGTATATGCCTATTTGGCAACAGTCTTTTAT
TATCATATTTTTTTCGTTCATTAATCAAAGTATTATATTTTTAGTAAAATTTTTGATAAACAAAGTTTTATGTACACCAG
AAATATTTTGGAGCTGCCTATTAGATGGCGGAGTATGGCCATTTTTGGTTCTTTTAATGCATAAAATGCATCGAAACTAA

Upstream 100 bases:

>100_bases
AATATTCAAATATTTATCTATTAAATCCATCATTAATAATGATAATATATAAATATGTTGTTCAGTATAATTATATTTGC
AATATAAACAACTTGACAAA

Downstream 100 bases:

>100_bases
TCAATAATTGATGATTTATAAATACCAACAGTAATAATTAACATCGAATAATTATTTCAGTTAAATAAATATAAATCTTT
GATTGCTTTAACGAATTATA

Product: rod shape-determining protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MYNKFNNYKLWVVYSSFIIAIFLQTIPFYPRIWNVHPSWTMILLIRWITILPNQVNIGTGFALGLIIDIILGSTLGIHSL
SLSILAYLVSRNIYFFRYMPIWQQSFIIIFFSFINQSIIFLVKFLINKVLCTPEIFWSCLLDGGVWPFLVLLMHKMHRN

Sequences:

>Translated_159_residues
MYNKFNNYKLWVVYSSFIIAIFLQTIPFYPRIWNVHPSWTMILLIRWITILPNQVNIGTGFALGLIIDIILGSTLGIHSL
SLSILAYLVSRNIYFFRYMPIWQQSFIIIFFSFINQSIIFLVKFLINKVLCTPEIFWSCLLDGGVWPFLVLLMHKMHRN
>Mature_159_residues
MYNKFNNYKLWVVYSSFIIAIFLQTIPFYPRIWNVHPSWTMILLIRWITILPNQVNIGTGFALGLIIDIILGSTLGIHSL
SLSILAYLVSRNIYFFRYMPIWQQSFIIIFFSFINQSIIFLVKFLINKVLCTPEIFWSCLLDGGVWPFLVLLMHKMHRN

Specific function: Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins [H]

COG id: COG2891

COG function: function code M; Cell shape-determining protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mreD family [H]

Homologues:

Organism=Escherichia coli, GI1789647, Length=156, Percent_Identity=39.1025641025641, Blast_Score=124, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007227 [H]

Pfam domain/function: PF04093 MreD [H]

EC number: NA

Molecular weight: Translated: 18800; Mature: 18800

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYNKFNNYKLWVVYSSFIIAIFLQTIPFYPRIWNVHPSWTMILLIRWITILPNQVNIGTG
CCCCCCCEEEEHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCH
FALGLIIDIILGSTLGIHSLSLSILAYLVSRNIYFFRYMPIWQQSFIIIFFSFINQSIIF
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHH
LVKFLINKVLCTPEIFWSCLLDGGVWPFLVLLMHKMHRN
HHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYNKFNNYKLWVVYSSFIIAIFLQTIPFYPRIWNVHPSWTMILLIRWITILPNQVNIGTG
CCCCCCCEEEEHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCCCH
FALGLIIDIILGSTLGIHSLSLSILAYLVSRNIYFFRYMPIWQQSFIIIFFSFINQSIIF
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHH
LVKFLINKVLCTPEIFWSCLLDGGVWPFLVLLMHKMHRN
HHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]