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The map label for this gene is tsf

Identifier: 71892054

GI number: 71892054

Start: 325958

End: 326776

Strand: Direct

Name: tsf

Synonym: BPEN_280

Alternate gene names: 71892054

Gene position: 325958-326776 (Clockwise)

Preceding gene: 71892053

Following gene: 71892055

Centisome position: 41.17

GC content: 29.06

Gene sequence:

>819_bases
ATGAAAGAAAAAATAATTAATATTAATAGCGATTTAATTAAAGAATTACGTAAACGTACTAGCATTGGTGTTGTAGAATG
TAAGCAAGCTTTAATTAAAGCTAATGGAGATCTTGAATTAGCTATAGATAACATGAGAAGATCCGGTTTAAAAACTGCTT
GCAAAAAATCTGGACACATCACATCATCAGGTCTCATTGCAGTAGAAATAACATCCAATAAGCAATATGGTATTATGATA
GAAATAAATTGTGAAACTGATTTCGTGGCTAAAGATAGTACTTTTCAAGAATTCGCTAAAACTGTTATTATTACAGCATT
AAATGAAAAAATTCATGATATTAATATACTACAAACTAGATTTAAAGAACAACGAACTAATTTAATTGCACAAGTTGGAG
AAAATATAAATATTCGTAGGTTTGTTGTGTTGACGGGTGATTTTTTGGGGTGTTATGTACACGGATTTAAAATAGGGGTA
ATAGTTGCTGCTAGCGGAAATGTAACTGCAGATTTAATGAAGCATATTTCCATGCACATCGCGGCTAAAAACCCTAAATA
TATTAATGTAAATGATGTTCCTAGAAATGTAATAATTCGTGAAAATAATATTCAAATGGACATTGCTATGAAATCTGGAA
AATCATACAAAATTTCAGAAAAAATAACCGCAGGACGTATGAGTAAATTTTTCAATGACATTGTATTAACAAAACAAAAC
TTCATAATGGATATTAACAAAACAGTGGAAGAGCTATTGATTGAGTATCATATAAAAATTAATAATTTTGCTCGCTTTGA
ATTAGGTGAAGATATGTAA

Upstream 100 bases:

>100_bases
GCATGCAATACTTAAGATAATTAATACTACACATAAATTTGTTAATAATTAAATGTGTAATAATATTTTCTATATATATT
CTTAATACGATGATATTACT

Downstream 100 bases:

>100_bases
ATTAATATTTTATATTATTTCTAAAATTTTAATTAATTAACACAGATCATCATTGGTTTTTAAAGTAATATATTCAATCC
TTTTAACAATAAAAAACTAT

Product: elongation factor Ts

Products: NA

Alternate protein names: EF-Ts

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MKEKIININSDLIKELRKRTSIGVVECKQALIKANGDLELAIDNMRRSGLKTACKKSGHITSSGLIAVEITSNKQYGIMI
EINCETDFVAKDSTFQEFAKTVIITALNEKIHDINILQTRFKEQRTNLIAQVGENINIRRFVVLTGDFLGCYVHGFKIGV
IVAASGNVTADLMKHISMHIAAKNPKYINVNDVPRNVIIRENNIQMDIAMKSGKSYKISEKITAGRMSKFFNDIVLTKQN
FIMDINKTVEELLIEYHIKINNFARFELGEDM

Sequences:

>Translated_272_residues
MKEKIININSDLIKELRKRTSIGVVECKQALIKANGDLELAIDNMRRSGLKTACKKSGHITSSGLIAVEITSNKQYGIMI
EINCETDFVAKDSTFQEFAKTVIITALNEKIHDINILQTRFKEQRTNLIAQVGENINIRRFVVLTGDFLGCYVHGFKIGV
IVAASGNVTADLMKHISMHIAAKNPKYINVNDVPRNVIIRENNIQMDIAMKSGKSYKISEKITAGRMSKFFNDIVLTKQN
FIMDINKTVEELLIEYHIKINNFARFELGEDM
>Mature_272_residues
MKEKIININSDLIKELRKRTSIGVVECKQALIKANGDLELAIDNMRRSGLKTACKKSGHITSSGLIAVEITSNKQYGIMI
EINCETDFVAKDSTFQEFAKTVIITALNEKIHDINILQTRFKEQRTNLIAQVGENINIRRFVVLTGDFLGCYVHGFKIGV
IVAASGNVTADLMKHISMHIAAKNPKYINVNDVPRNVIIRENNIQMDIAMKSGKSYKISEKITAGRMSKFFNDIVLTKQN
FIMDINKTVEELLIEYHIKINNFARFELGEDM

Specific function: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome

COG id: COG0264

COG function: function code J; Translation elongation factor Ts

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-Ts family

Homologues:

Organism=Escherichia coli, GI1786366, Length=266, Percent_Identity=49.6240601503759, Blast_Score=284, Evalue=4e-78,
Organism=Drosophila melanogaster, GI19921466, Length=291, Percent_Identity=28.8659793814433, Blast_Score=79, Evalue=3e-15,

Paralogues:

None

Copy number: 2670 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1100 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 4173 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 14563 Molecules/Cell In: Growth Phase, Gluco

Swissprot (AC and ID): EFTS_BLOPB (Q493D1)

Other databases:

- EMBL:   CP000016
- RefSeq:   YP_277784.1
- ProteinModelPortal:   Q493D1
- SMR:   Q493D1
- STRING:   Q493D1
- GeneID:   3563217
- GenomeReviews:   CP000016_GR
- KEGG:   bpn:BPEN_280
- eggNOG:   COG0264
- HOGENOM:   HBG713289
- OMA:   YLHGTRI
- ProtClustDB:   PRK09377
- BioCyc:   CBLO291272:BPEN_280-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00050
- InterPro:   IPR001816
- InterPro:   IPR014039
- InterPro:   IPR018101
- InterPro:   IPR009060
- InterPro:   IPR000449
- Gene3D:   G3DSA:3.30.479.20
- PANTHER:   PTHR11741
- TIGRFAMs:   TIGR00116

Pfam domain/function: PF00889 EF_TS; PF00627 UBA; SSF54713 EF_TS; SSF46934 UBA_like

EC number: NA

Molecular weight: Translated: 30727; Mature: 30727

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: PS01126 EF_TS_1; PS01127 EF_TS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEKIININSDLIKELRKRTSIGVVECKQALIKANGDLELAIDNMRRSGLKTACKKSGHI
CCCEEEECCHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEHHHHCCHHHHHHCCCCE
TSSGLIAVEITSNKQYGIMIEINCETDFVAKDSTFQEFAKTVIITALNEKIHDINILQTR
ECCCEEEEEEECCCCEEEEEEEECCCCEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
FKEQRTNLIAQVGENINIRRFVVLTGDFLGCYVHGFKIGVIVAASGNVTADLMKHISMHI
HHHHHHHHHHHHCCCCCEEEEEEEECCHHEEEEEEEEEEEEEEECCCCHHHHHHHHHEEE
AAKNPKYINVNDVPRNVIIRENNIQMDIAMKSGKSYKISEKITAGRMSKFFNDIVLTKQN
EECCCCEEEECCCCCEEEEECCCEEEEEEEECCCCEEEHHHHHHHHHHHHHHHHEEECCH
FIMDINKTVEELLIEYHIKINNFARFELGEDM
HEEEHHHHHHHHHHHEEEEECCEEEEECCCCC
>Mature Secondary Structure
MKEKIININSDLIKELRKRTSIGVVECKQALIKANGDLELAIDNMRRSGLKTACKKSGHI
CCCEEEECCHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEEHHHHCCHHHHHHCCCCE
TSSGLIAVEITSNKQYGIMIEINCETDFVAKDSTFQEFAKTVIITALNEKIHDINILQTR
ECCCEEEEEEECCCCEEEEEEEECCCCEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
FKEQRTNLIAQVGENINIRRFVVLTGDFLGCYVHGFKIGVIVAASGNVTADLMKHISMHI
HHHHHHHHHHHHCCCCCEEEEEEEECCHHEEEEEEEEEEEEEEECCCCHHHHHHHHHEEE
AAKNPKYINVNDVPRNVIIRENNIQMDIAMKSGKSYKISEKITAGRMSKFFNDIVLTKQN
EECCCCEEEECCCCCEEEEECCCEEEEEEEECCCCEEEHHHHHHHHHHHHHHHHEEECCH
FIMDINKTVEELLIEYHIKINNFARFELGEDM
HEEEHHHHHHHHHHHEEEEECCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA