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The map label for this gene is nusB

Identifier: 71892016

GI number: 71892016

Start: 273155

End: 273589

Strand: Direct

Name: nusB

Synonym: BPEN_242

Alternate gene names: 71892016

Gene position: 273155-273589 (Clockwise)

Preceding gene: 71892015

Following gene: 71892017

Centisome position: 34.5

GC content: 29.89

Gene sequence:

>435_bases
GTGAAAGCAATTAGTAGAAGGCGTGCTCGTGAATGTACATTGCAGGCATTGTATTCTTGGCAAGTATCTAAAAATGATGT
TAAAGAAATAGAACGTTATGTTGTAACAGAGCAAGATATTCAAGATTGCAATATCTCTTACTTTCATGAATTATATATTG
GAGTAATAAGTTGCGCTGAAGAATTGGATAAATTAATGATACCGCATTTATCCCGCAATTTAGAGAAATTAGGTTATATT
GAACATTCAGTGTTACGTATCGCATTATTTGAGCTTACCAAATGTAATGATATACCATATAAAGTTGCCATTAATGAAGC
AATTGAGCTTGTAAAAATTTTTGGAGCTGAAAAAAGTCATAAATTTATTAATGGAGTATTAGATAAAATAGCCAATCAGC
TTTGTGTTAGTACAAACAATCATATTATTAAATAA

Upstream 100 bases:

>100_bases
CAAAGGATCAGAAGCTGCTTTGGCTGTTTTAGAAATGATTAATATACTAAAAATAATTAAAAATAGTTCTTAATACATAT
AAATATATCAAAGGAATTAC

Downstream 100 bases:

>100_bases
TATGATTGTTTGTATAATGAAAAATAAATTTGAAAGAATAATAATTGTTTTTATTCATCCCGAACCGAATAGACATGTGC
TACTGATATGTTTTTAAATA

Product: transcription antitermination protein NusB

Products: NA

Alternate protein names: Protein nusB

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MKAISRRRARECTLQALYSWQVSKNDVKEIERYVVTEQDIQDCNISYFHELYIGVISCAEELDKLMIPHLSRNLEKLGYI
EHSVLRIALFELTKCNDIPYKVAINEAIELVKIFGAEKSHKFINGVLDKIANQLCVSTNNHIIK

Sequences:

>Translated_144_residues
MKAISRRRARECTLQALYSWQVSKNDVKEIERYVVTEQDIQDCNISYFHELYIGVISCAEELDKLMIPHLSRNLEKLGYI
EHSVLRIALFELTKCNDIPYKVAINEAIELVKIFGAEKSHKFINGVLDKIANQLCVSTNNHIIK
>Mature_144_residues
MKAISRRRARECTLQALYSWQVSKNDVKEIERYVVTEQDIQDCNISYFHELYIGVISCAEELDKLMIPHLSRNLEKLGYI
EHSVLRIALFELTKCNDIPYKVAINEAIELVKIFGAEKSHKFINGVLDKIANQLCVSTNNHIIK

Specific function: Involved in the transcription termination process

COG id: COG0781

COG function: function code K; Transcription termination factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nusB family

Homologues:

Organism=Escherichia coli, GI1786618, Length=131, Percent_Identity=61.8320610687023, Blast_Score=161, Evalue=1e-41,

Paralogues:

None

Copy number: 900 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NUSB_BLOPB (Q493G9)

Other databases:

- EMBL:   CP000016
- RefSeq:   YP_277746.1
- HSSP:   Q9X286
- ProteinModelPortal:   Q493G9
- SMR:   Q493G9
- STRING:   Q493G9
- GeneID:   3562776
- GenomeReviews:   CP000016_GR
- KEGG:   bpn:BPEN_242
- eggNOG:   COG0781
- HOGENOM:   HBG734409
- OMA:   IPYKVVI
- ProtClustDB:   PRK00202
- BioCyc:   CBLO291272:BPEN_242-MONOMER
- HAMAP:   MF_00073
- InterPro:   IPR011605
- InterPro:   IPR006027
- Gene3D:   G3DSA:1.10.940.10
- TIGRFAMs:   TIGR01951

Pfam domain/function: PF01029 NusB; SSF48013 NusB_RsmB_TIM44

EC number: NA

Molecular weight: Translated: 16654; Mature: 16654

Theoretical pI: Translated: 7.46; Mature: 7.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAISRRRARECTLQALYSWQVSKNDVKEIERYVVTEQDIQDCNISYFHELYIGVISCAE
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHH
ELDKLMIPHLSRNLEKLGYIEHSVLRIALFELTKCNDIPYKVAINEAIELVKIFGAEKSH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHH
KFINGVLDKIANQLCVSTNNHIIK
HHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKAISRRRARECTLQALYSWQVSKNDVKEIERYVVTEQDIQDCNISYFHELYIGVISCAE
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHH
ELDKLMIPHLSRNLEKLGYIEHSVLRIALFELTKCNDIPYKVAINEAIELVKIFGAEKSH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHH
KFINGVLDKIANQLCVSTNNHIIK
HHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA