| Definition | Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome. |
|---|---|
| Accession | NC_007292 |
| Length | 791,654 |
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The map label for this gene is hflK [H]
Identifier: 71891870
GI number: 71891870
Start: 99260
End: 100555
Strand: Direct
Name: hflK [H]
Synonym: BPEN_084
Alternate gene names: 71891870
Gene position: 99260-100555 (Clockwise)
Preceding gene: 71891869
Following gene: 71891871
Centisome position: 12.54
GC content: 33.02
Gene sequence:
>1296_bases ATGATTTGTAATTATCTTAATAACTATAAATATATTCATGATCCATGGGGGCATCATGATAAGAATGATGTAGATCGTCC TTCTATTGAAGATAAGAATAAATCTGAATTTAATATATTAGATTCAGATAAATATTTGAATAAAATAACTGATAAATTAA ATATATTTAGTAAGCAAAATAAGGATTCAGAAAAATTTCCTAAAAATAAAAATTTTTTTATAATGTTAATGTTAATTATT GTTGTTTTTGTGTGGATTATTAGTGGTTTGTACACGATTAAAGAAGCAGAACGCGGGGTAGTTTTAAGATTTGGAAAATA TCATCATTTAGTGCAACCAGGTTTAAATTGGAAGCCTACTTTTTTTGATGTTGTAATTCCAGTAAATGTAGAATCAGTAC GTGAATTAGCAGCTTCTGGTATGATGTTGACTTCAGATGAAAATGTAGTCCGAGTAGAGATGAATGTACAGTACCGCGTA ACTGATCCAAAAAACTATTTATTTAACGTTATTGATGCTGACGATAGCTTGCGTCAAGCTACTGATAGTGCTTTGCGTGG AGTTATTGGGAAATATAATATGGATCGTATTTTAACAGAAGGGCGCACGGTGGTACGTAGTGATACTCGAAGAGTGTTAG AGAAAACGATACACCCTTATAATATGGGTATTACTTTATTAGATGTAAACTTTCAAACAGCTCGCCCCCCAGAAGAGGTA AAAGCAGCATTTGATGATGCTATTGCCGCCCGAGAAAATGAACAACAATATATTCGTGAGGCTGAAGCTTATGCTAATGA AGTACAACCACGAGCCAATGGACACGCGCAACGTATTTTAGAGGAAGGGCGAGCGTATAAAGCACGTACTGTCTTAGAAG CACAAGGTGAAGTACAAAGATTTACTAAAATTTTGCCAGAATATAAAGCAGCTCCTGAAATTACTCGTGAGCGATTATAT ATTAATTCCATGGAGCGTGTGTTAAGTAATACTAGAAAAATATTTGTAAATTCAAAAGATACGCAGAATGTACTATTGTT ACCTTCAGGTCAATTAAAACAAATTAAAGATAACAATGATATTGTATATTCTGATAGTATTGATAATACTGATGATGCTT TAAACTTAAATCAAATATGTGCTACTACTGATGCTAACATGAATAATGCACAGTTAATATCAAAAAATAGCCATCTGTCT CGTCATACAAATTCTATACCTAAAGAAAAAGTATTAGACCAAAGACAGGCTAATGTACAACGTGTTGATATTGCGCGCAA AGGGAGAGAGTCGTAG
Upstream 100 bases:
>100_bases CGTTTATTAAAAAATAATAAATTATTGATAGATTATATTGTTTAATATTTTTAAAATAAAGAAAATATATAGATCACTCA TATAATGTGTGAGGAAAAAT
Downstream 100 bases:
>100_bases ATGATACGAAATTTTTTTTCATTTGTTATATGTGTAATAGTAATATTATTTTTTTCTTTATTTACAATAGAAGAGGGGCA TAAGGGTATTATATTGCGTT
Product: HflK
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 431; Mature: 431
Protein sequence:
>431_residues MICNYLNNYKYIHDPWGHHDKNDVDRPSIEDKNKSEFNILDSDKYLNKITDKLNIFSKQNKDSEKFPKNKNFFIMLMLII VVFVWIISGLYTIKEAERGVVLRFGKYHHLVQPGLNWKPTFFDVVIPVNVESVRELAASGMMLTSDENVVRVEMNVQYRV TDPKNYLFNVIDADDSLRQATDSALRGVIGKYNMDRILTEGRTVVRSDTRRVLEKTIHPYNMGITLLDVNFQTARPPEEV KAAFDDAIAARENEQQYIREAEAYANEVQPRANGHAQRILEEGRAYKARTVLEAQGEVQRFTKILPEYKAAPEITRERLY INSMERVLSNTRKIFVNSKDTQNVLLLPSGQLKQIKDNNDIVYSDSIDNTDDALNLNQICATTDANMNNAQLISKNSHLS RHTNSIPKEKVLDQRQANVQRVDIARKGRES
Sequences:
>Translated_431_residues MICNYLNNYKYIHDPWGHHDKNDVDRPSIEDKNKSEFNILDSDKYLNKITDKLNIFSKQNKDSEKFPKNKNFFIMLMLII VVFVWIISGLYTIKEAERGVVLRFGKYHHLVQPGLNWKPTFFDVVIPVNVESVRELAASGMMLTSDENVVRVEMNVQYRV TDPKNYLFNVIDADDSLRQATDSALRGVIGKYNMDRILTEGRTVVRSDTRRVLEKTIHPYNMGITLLDVNFQTARPPEEV KAAFDDAIAARENEQQYIREAEAYANEVQPRANGHAQRILEEGRAYKARTVLEAQGEVQRFTKILPEYKAAPEITRERLY INSMERVLSNTRKIFVNSKDTQNVLLLPSGQLKQIKDNNDIVYSDSIDNTDDALNLNQICATTDANMNNAQLISKNSHLS RHTNSIPKEKVLDQRQANVQRVDIARKGRES >Mature_431_residues MICNYLNNYKYIHDPWGHHDKNDVDRPSIEDKNKSEFNILDSDKYLNKITDKLNIFSKQNKDSEKFPKNKNFFIMLMLII VVFVWIISGLYTIKEAERGVVLRFGKYHHLVQPGLNWKPTFFDVVIPVNVESVRELAASGMMLTSDENVVRVEMNVQYRV TDPKNYLFNVIDADDSLRQATDSALRGVIGKYNMDRILTEGRTVVRSDTRRVLEKTIHPYNMGITLLDVNFQTARPPEEV KAAFDDAIAARENEQQYIREAEAYANEVQPRANGHAQRILEEGRAYKARTVLEAQGEVQRFTKILPEYKAAPEITRERLY INSMERVLSNTRKIFVNSKDTQNVLLLPSGQLKQIKDNNDIVYSDSIDNTDDALNLNQICATTDANMNNAQLISKNSHLS RHTNSIPKEKVLDQRQANVQRVDIARKGRES
Specific function: HflC and HflK govern the stability of phage lambda cII protein and have been proposed to encode or regulate a cII- specific protease [H]
COG id: COG0330
COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the band 7/mec-2 family. HflK subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790616, Length=341, Percent_Identity=68.0351906158358, Blast_Score=451, Evalue=1e-128, Organism=Escherichia coli, GI1786697, Length=246, Percent_Identity=23.5772357723577, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 - InterPro: IPR010201 - InterPro: IPR020980 - InterPro: IPR001972 [H]
Pfam domain/function: PF01145 Band_7; PF12221 HflK_N [H]
EC number: NA
Molecular weight: Translated: 49640; Mature: 49640
Theoretical pI: Translated: 8.18; Mature: 8.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MICNYLNNYKYIHDPWGHHDKNDVDRPSIEDKNKSEFNILDSDKYLNKITDKLNIFSKQN CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCC KDSEKFPKNKNFFIMLMLIIVVFVWIISGLYTIKEAERGVVLRFGKYHHLVQPGLNWKPT CCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHCCCCCCCCC FFDVVIPVNVESVRELAASGMMLTSDENVVRVEMNVQYRVTDPKNYLFNVIDADDSLRQA EEEEEEECCHHHHHHHHHCCEEEECCCCEEEEEEEEEEEEECCCCCEEEEECCCHHHHHH TDSALRGVIGKYNMDRILTEGRTVVRSDTRRVLEKTIHPYNMGITLLDVNFQTARPPEEV HHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHH KAAFDDAIAARENEQQYIREAEAYANEVQPRANGHAQRILEEGRAYKARTVLEAQGEVQR HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH FTKILPEYKAAPEITRERLYINSMERVLSNTRKIFVNSKDTQNVLLLPSGQLKQIKDNND HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEECCCCHHEECCCCC IVYSDSIDNTDDALNLNQICATTDANMNNAQLISKNSHLSRHTNSIPKEKVLDQRQANVQ EEEECCCCCCCCCCCHHHHHEECCCCCCCCEEEECCCHHHHHHCCCCHHHHHHHHHCCHH RVDIARKGRES HHHHHHCCCCC >Mature Secondary Structure MICNYLNNYKYIHDPWGHHDKNDVDRPSIEDKNKSEFNILDSDKYLNKITDKLNIFSKQN CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCC KDSEKFPKNKNFFIMLMLIIVVFVWIISGLYTIKEAERGVVLRFGKYHHLVQPGLNWKPT CCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHCCCCCCCCC FFDVVIPVNVESVRELAASGMMLTSDENVVRVEMNVQYRVTDPKNYLFNVIDADDSLRQA EEEEEEECCHHHHHHHHHCCEEEECCCCEEEEEEEEEEEEECCCCCEEEEECCCHHHHHH TDSALRGVIGKYNMDRILTEGRTVVRSDTRRVLEKTIHPYNMGITLLDVNFQTARPPEEV HHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHH KAAFDDAIAARENEQQYIREAEAYANEVQPRANGHAQRILEEGRAYKARTVLEAQGEVQR HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH FTKILPEYKAAPEITRERLYINSMERVLSNTRKIFVNSKDTQNVLLLPSGQLKQIKDNND HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEECCCCHHEECCCCC IVYSDSIDNTDDALNLNQICATTDANMNNAQLISKNSHLSRHTNSIPKEKVLDQRQANVQ EEEECCCCCCCCCCCHHHHHEECCCCCCCCEEEECCCHHHHHHCCCCHHHHHHHHHCCHH RVDIARKGRES HHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]