| Definition | Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome. |
|---|---|
| Accession | NC_007292 |
| Length | 791,654 |
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The map label for this gene is hflX [H]
Identifier: 71891869
GI number: 71891869
Start: 97918
End: 99204
Strand: Direct
Name: hflX [H]
Synonym: BPEN_083
Alternate gene names: 71891869
Gene position: 97918-99204 (Clockwise)
Preceding gene: 71891868
Following gene: 71891870
Centisome position: 12.37
GC content: 31.93
Gene sequence:
>1287_bases TTGTGTGATTCGGGTTATTCGGCTAATCAATCTATTTTAGTCCATACTTTTTTTGCTAAAGAAAAACAAAATGAAAATTT CAATTTACAGGAATTTTTATCTTTGGCATCTACGGCAGGCGTGGAGGTATTGGAAATTCTTACTAGTAATTGTAAAACTT GTAATGCTAAATATTTTATCGGGATCGGAAAAACATTAGAACTTGAACGAATGATTAGGAATAATTCTGTATCTATTGTG TTGTTCAATTGTATTTTGTCTCCTCATCAAGAACGAAATCTTATGTGTTTATTGAAATGCAAGATTATTGATAGAAATCA ACTGATTCTCAACATTTTTGCGCAACGTGCACGTACGTACGAAGGTAAGTTGCAGGTGAAATTAGCTCAACTGAGGCATT TAAATTCTCGTTTAGTACATGAATGGAGTCATCTTGAACGCCAAAAAGGAGGTATTGGTTTACGAGGGGGAGCAGGAGAG ATGCAATTAGAAAGTGATCGCCGTTTATTACGCAAGGAGATGAATCAGATTTTATTGCGTCTAAAAAAAATAGAAAATCA ACGGGAACAGGGTAGACGACATCGTGTTAGAATTGGAGTACCTACTGTTTCTTTAGTAGGATATACAAATGCTGGAAAAT CTACTTTATTTAACACAATGACTGCATCACATGTGTATACATCATCGAAACTGTTTGCCACTCTTGATCCTACCAGTAGA CGTATTGTATACAAAGGTGTACATGATATTATATTAACAGACACGGTAGGTTTTATTCAAAATTTACCACGTGGTTTAAT ATCTTCTTTTCAGGCGACTTTAAAAGAAACAGTACAAGCAACTCTATTATTACATGTTGTAGACGTTGCTGATGAAAGAT TTGAACAAAATATTAACACGGTACATTGTATTTTAAGTAATTTAAACGTTCATAATGTTCCAAGGATTTTGGTGATGAAC AAGATAGATCAATTAAAAAAAATAGTGCCACGTATTGATCGAGATAATCATGGTCGTCCAATACGGGTCTGGATATCAGC TCAAAATAATTTAGGTCTTTCTTTATTGCTACAAGCTATTAATGAATTGCTATCAAACTATATGATTTCTTATGAATTAC GAATGCCTATAAGTAACGGTTTATGCGAGAAGTTATATAAATTACAAGTTGTTAAACAATATTGGGTTGAAGATCATAAT TATATTAGGTTAAAAATATATTTATCTTCTATAAATTGGGGTCGTTTATTAAAAAATAATAAATTATTGATAGATTATAT TGTTTAA
Upstream 100 bases:
>100_bases GAATACTATTAAGTATGATATACTATAAAATATGTGATAAATTCATCATATTTGATGAAATAAGTATAACTTATTTGTGG AATTTGTGGAGTAGCTTTTA
Downstream 100 bases:
>100_bases TATTTTTAAAATAAAGAAAATATATAGATCACTCATATAATGTGTGAGGAAAAATATGATTTGTAATTATCTTAATAACT ATAAATATATTCATGATCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MCDSGYSANQSILVHTFFAKEKQNENFNLQEFLSLASTAGVEVLEILTSNCKTCNAKYFIGIGKTLELERMIRNNSVSIV LFNCILSPHQERNLMCLLKCKIIDRNQLILNIFAQRARTYEGKLQVKLAQLRHLNSRLVHEWSHLERQKGGIGLRGGAGE MQLESDRRLLRKEMNQILLRLKKIENQREQGRRHRVRIGVPTVSLVGYTNAGKSTLFNTMTASHVYTSSKLFATLDPTSR RIVYKGVHDIILTDTVGFIQNLPRGLISSFQATLKETVQATLLLHVVDVADERFEQNINTVHCILSNLNVHNVPRILVMN KIDQLKKIVPRIDRDNHGRPIRVWISAQNNLGLSLLLQAINELLSNYMISYELRMPISNGLCEKLYKLQVVKQYWVEDHN YIRLKIYLSSINWGRLLKNNKLLIDYIV
Sequences:
>Translated_428_residues MCDSGYSANQSILVHTFFAKEKQNENFNLQEFLSLASTAGVEVLEILTSNCKTCNAKYFIGIGKTLELERMIRNNSVSIV LFNCILSPHQERNLMCLLKCKIIDRNQLILNIFAQRARTYEGKLQVKLAQLRHLNSRLVHEWSHLERQKGGIGLRGGAGE MQLESDRRLLRKEMNQILLRLKKIENQREQGRRHRVRIGVPTVSLVGYTNAGKSTLFNTMTASHVYTSSKLFATLDPTSR RIVYKGVHDIILTDTVGFIQNLPRGLISSFQATLKETVQATLLLHVVDVADERFEQNINTVHCILSNLNVHNVPRILVMN KIDQLKKIVPRIDRDNHGRPIRVWISAQNNLGLSLLLQAINELLSNYMISYELRMPISNGLCEKLYKLQVVKQYWVEDHN YIRLKIYLSSINWGRLLKNNKLLIDYIV >Mature_428_residues MCDSGYSANQSILVHTFFAKEKQNENFNLQEFLSLASTAGVEVLEILTSNCKTCNAKYFIGIGKTLELERMIRNNSVSIV LFNCILSPHQERNLMCLLKCKIIDRNQLILNIFAQRARTYEGKLQVKLAQLRHLNSRLVHEWSHLERQKGGIGLRGGAGE MQLESDRRLLRKEMNQILLRLKKIENQREQGRRHRVRIGVPTVSLVGYTNAGKSTLFNTMTASHVYTSSKLFATLDPTSR RIVYKGVHDIILTDTVGFIQNLPRGLISSFQATLKETVQATLLLHVVDVADERFEQNINTVHCILSNLNVHNVPRILVMN KIDQLKKIVPRIDRDNHGRPIRVWISAQNNLGLSLLLQAINELLSNYMISYELRMPISNGLCEKLYKLQVVKQYWVEDHN YIRLKIYLSSINWGRLLKNNKLLIDYIV
Specific function: Unknown
COG id: COG2262
COG function: function code R; GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI310124269, Length=272, Percent_Identity=30.5147058823529, Blast_Score=102, Evalue=9e-22, Organism=Homo sapiens, GI310124267, Length=272, Percent_Identity=30.5147058823529, Blast_Score=102, Evalue=9e-22, Organism=Homo sapiens, GI310124171, Length=272, Percent_Identity=30.5147058823529, Blast_Score=102, Evalue=9e-22, Organism=Homo sapiens, GI310124169, Length=272, Percent_Identity=30.5147058823529, Blast_Score=102, Evalue=9e-22, Organism=Homo sapiens, GI310133118, Length=296, Percent_Identity=30.4054054054054, Blast_Score=101, Evalue=1e-21, Organism=Homo sapiens, GI310133116, Length=293, Percent_Identity=30.3754266211604, Blast_Score=100, Evalue=2e-21, Organism=Escherichia coli, GI1790615, Length=429, Percent_Identity=52.6806526806527, Blast_Score=472, Evalue=1e-134, Organism=Caenorhabditis elegans, GI17561038, Length=348, Percent_Identity=27.2988505747126, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI24650079, Length=429, Percent_Identity=25.8741258741259, Blast_Score=103, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR016496 - InterPro: IPR006073 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 49217; Mature: 49217
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCDSGYSANQSILVHTFFAKEKQNENFNLQEFLSLASTAGVEVLEILTSNCKTCNAKYFI CCCCCCCCCCEEEEEEEEHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEE GIGKTLELERMIRNNSVSIVLFNCILSPHQERNLMCLLKCKIIDRNQLILNIFAQRARTY ECCCCHHHHHHHCCCCEEEEEEEECCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHCC EGKLQVKLAQLRHLNSRLVHEWSHLERQKGGIGLRGGAGEMQLESDRRLLRKEMNQILLR CCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEHHHHHHHHHHHHHHHHH LKKIENQREQGRRHRVRIGVPTVSLVGYTNAGKSTLFNTMTASHVYTSSKLFATLDPTSR HHHHHHHHHCCCCCEEEEECCEEEEEEECCCCCHHHHHHHHHHHEEECCCEEEEECCCCC RIVYKGVHDIILTDTVGFIQNLPRGLISSFQATLKETVQATLLLHVVDVADERFEQNINT EEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE VHCILSNLNVHNVPRILVMNKIDQLKKIVPRIDRDNHGRPIRVWISAQNNLGLSLLLQAI EEHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCHHHHHHHH NELLSNYMISYELRMPISNGLCEKLYKLQVVKQYWVEDHNYIRLKIYLSSINWGRLLKNN HHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCHHHHHCCC KLLIDYIV CEEEEEEC >Mature Secondary Structure MCDSGYSANQSILVHTFFAKEKQNENFNLQEFLSLASTAGVEVLEILTSNCKTCNAKYFI CCCCCCCCCCEEEEEEEEHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEEE GIGKTLELERMIRNNSVSIVLFNCILSPHQERNLMCLLKCKIIDRNQLILNIFAQRARTY ECCCCHHHHHHHCCCCEEEEEEEECCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHCC EGKLQVKLAQLRHLNSRLVHEWSHLERQKGGIGLRGGAGEMQLESDRRLLRKEMNQILLR CCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEHHHHHHHHHHHHHHHHH LKKIENQREQGRRHRVRIGVPTVSLVGYTNAGKSTLFNTMTASHVYTSSKLFATLDPTSR HHHHHHHHHCCCCCEEEEECCEEEEEEECCCCCHHHHHHHHHHHEEECCCEEEEECCCCC RIVYKGVHDIILTDTVGFIQNLPRGLISSFQATLKETVQATLLLHVVDVADERFEQNINT EEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE VHCILSNLNVHNVPRILVMNKIDQLKKIVPRIDRDNHGRPIRVWISAQNNLGLSLLLQAI EEHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCHHHHHHHH NELLSNYMISYELRMPISNGLCEKLYKLQVVKQYWVEDHNYIRLKIYLSSINWGRLLKNN HHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCHHHHHCCC KLLIDYIV CEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8248183; 7610040; 9278503; 2020545; 3040675 [H]