| Definition | Corynebacterium jeikeium K411, complete genome. |
|---|---|
| Accession | NC_007164 |
| Length | 2,462,499 |
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The map label for this gene is iunH2 [H]
Identifier: 68537173
GI number: 68537173
Start: 2432102
End: 2433172
Strand: Direct
Name: iunH2 [H]
Synonym: jk2078
Alternate gene names: 68537173
Gene position: 2432102-2433172 (Clockwise)
Preceding gene: 68537172
Following gene: 68537177
Centisome position: 98.77
GC content: 67.04
Gene sequence:
>1071_bases ATGACTCAGAAGATCATCCTGGACTGCGATCCGGGGCACGACGACGCAATCGCCATGCTCCTAGCCTGGGGAAACCCTAA CCTGGACCTGGTGGCGGTCACGACGGTGGCGGGCAACCAGACGCTGGAGAAGGTGACCAAGAACGCCCTGGCGCTGGCGC GCGTCGGCAACATCACCGGCATTCCCTTCGCCGCCGGAGCGGACCGCCCGCTGGTGGCGCCGCAGATCATTCCGGAGGAA ATCCACGGGGACAGCGGCCTGGACGGCCCGCAGTTGCCCGCCGCCGGAGCCGAGCTGGATTCACGCCATGCGGTGAACCT CATTGCGGACCTCATCCGCGACAACGAGCCGGGTAGTGTGACCCTCGTCCCCACGGGAGCGCTGACTAGCATCGCTCTTT TTGCCCGCATGTATCCCGAGCTGGTGAAGCGCGTCGGTGGCGTCACCCTGATGGGTGGTGCGCACCACGCGGGCAACATG ACCCCGAGCGCCGAGTTCAACATCCTGGCCGACCCGGAGGCCGCGAAGATCGTGTTCGGCGCGGGTTGGCCGGTGACGAT GGTCGGGTTGGACGTCACACACAAGGTGCTGGCCACGCCGCAGCGGATGGCGCAGCTGGCAGAGGTCGACACGGACGTGG CGAAGTTCATCGCGGAGCTTGTGGAATTCTTCGGCGGTGCGTACATGAAGGAGCGCCACTACCCCGGCCCACCGATGCAC GACCCGCTGGCCGTCGCGGCCGTGGCAGACCCGCAGGTCGTACGCACAATCCTGGCACCCATCGACGTGGAGACCAAGGG CGAGCTGACGCGCGGGGCGACGGTCGTGGACCTGCGGCGCACCTGGGGAAGCCAGGGTGGCGGGCAAGATCCGACGGCCC TGGGTACGGCGGATGATTCTGATTTTGACGCCACCGCGTCCGCCACTGCAGCGGATGCAACCGGCACGGCCGGGCAGCCT GGTGCAGCGGACACTACCCTGCGCACCCGCGTGGCCGTGGATGTCGACGCGGAGCGCTTCTGGAACCTGCTGGTTGACGC ACTACAGCGCATCGGGAATACCGGCTTCTAA
Upstream 100 bases:
>100_bases CACGTTGGGCGCGGCGGCCGGGGCGCTGGCCACGCAGAAGCGCGGCGCAGCGGGCAGCTACGCCACCGAGAACGAAATCC GTCGACTAGGAGAAGCATAA
Downstream 100 bases:
>100_bases AGAAGCTCTTCGAGAGCTCTATGCGGCTTTGGGCGGCCTTAAGCTGCCTGAAGCTGCCTAAACTGCCTACACAGCCAGCT AGGGCAGCGCAGCCAACTGG
Product: putative inosine-uridine preferring nucleoside hydrolase
Products: D-ribose; purine
Alternate protein names: Cytidine/uridine-specific hydrolase [H]
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MTQKIILDCDPGHDDAIAMLLAWGNPNLDLVAVTTVAGNQTLEKVTKNALALARVGNITGIPFAAGADRPLVAPQIIPEE IHGDSGLDGPQLPAAGAELDSRHAVNLIADLIRDNEPGSVTLVPTGALTSIALFARMYPELVKRVGGVTLMGGAHHAGNM TPSAEFNILADPEAAKIVFGAGWPVTMVGLDVTHKVLATPQRMAQLAEVDTDVAKFIAELVEFFGGAYMKERHYPGPPMH DPLAVAAVADPQVVRTILAPIDVETKGELTRGATVVDLRRTWGSQGGGQDPTALGTADDSDFDATASATAADATGTAGQP GAADTTLRTRVAVDVDAERFWNLLVDALQRIGNTGF
Sequences:
>Translated_356_residues MTQKIILDCDPGHDDAIAMLLAWGNPNLDLVAVTTVAGNQTLEKVTKNALALARVGNITGIPFAAGADRPLVAPQIIPEE IHGDSGLDGPQLPAAGAELDSRHAVNLIADLIRDNEPGSVTLVPTGALTSIALFARMYPELVKRVGGVTLMGGAHHAGNM TPSAEFNILADPEAAKIVFGAGWPVTMVGLDVTHKVLATPQRMAQLAEVDTDVAKFIAELVEFFGGAYMKERHYPGPPMH DPLAVAAVADPQVVRTILAPIDVETKGELTRGATVVDLRRTWGSQGGGQDPTALGTADDSDFDATASATAADATGTAGQP GAADTTLRTRVAVDVDAERFWNLLVDALQRIGNTGF >Mature_355_residues TQKIILDCDPGHDDAIAMLLAWGNPNLDLVAVTTVAGNQTLEKVTKNALALARVGNITGIPFAAGADRPLVAPQIIPEEI HGDSGLDGPQLPAAGAELDSRHAVNLIADLIRDNEPGSVTLVPTGALTSIALFARMYPELVKRVGGVTLMGGAHHAGNMT PSAEFNILADPEAAKIVFGAGWPVTMVGLDVTHKVLATPQRMAQLAEVDTDVAKFIAELVEFFGGAYMKERHYPGPPMHD PLAVAAVADPQVVRTILAPIDVETKGELTRGATVVDLRRTWGSQGGGQDPTALGTADDSDFDATASATAADATGTAGQPG AADTTLRTRVAVDVDAERFWNLLVDALQRIGNTGF
Specific function: Hydrolyzes cytidine or uridine to ribose and cytosine or uracil, respectively [H]
COG id: COG1957
COG function: function code F; Inosine-uridine nucleoside N-ribohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IUNH family. RihA subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786871, Length=287, Percent_Identity=43.9024390243902, Blast_Score=228, Evalue=4e-61, Organism=Escherichia coli, GI1788486, Length=300, Percent_Identity=37.6666666666667, Blast_Score=209, Evalue=2e-55, Organism=Escherichia coli, GI1786213, Length=290, Percent_Identity=39.6551724137931, Blast_Score=152, Evalue=2e-38, Organism=Caenorhabditis elegans, GI32565474, Length=294, Percent_Identity=30.952380952381, Blast_Score=95, Evalue=5e-20, Organism=Caenorhabditis elegans, GI17565698, Length=304, Percent_Identity=26.9736842105263, Blast_Score=83, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6320608, Length=359, Percent_Identity=31.7548746518106, Blast_Score=142, Evalue=7e-35, Organism=Drosophila melanogaster, GI24583915, Length=190, Percent_Identity=30.5263157894737, Blast_Score=83, Evalue=3e-16, Organism=Drosophila melanogaster, GI24641839, Length=188, Percent_Identity=36.7021276595745, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24641837, Length=196, Percent_Identity=34.1836734693878, Blast_Score=75, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015910 - InterPro: IPR023186 - InterPro: IPR001910 - InterPro: IPR022975 [H]
Pfam domain/function: PF01156 IU_nuc_hydro [H]
EC number: 3.2.2.1
Molecular weight: Translated: 37156; Mature: 37024
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: PS01247 IUNH
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQKIILDCDPGHDDAIAMLLAWGNPNLDLVAVTTVAGNQTLEKVTKNALALARVGNITG CCCEEEEECCCCCCCEEEEEEEECCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCC IPFAAGADRPLVAPQIIPEEIHGDSGLDGPQLPAAGAELDSRHAVNLIADLIRDNEPGSV CCCCCCCCCCCCCHHCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEE TLVPTGALTSIALFARMYPELVKRVGGVTLMGGAHHAGNMTPSAEFNILADPEAAKIVFG EEEECCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEE AGWPVTMVGLDVTHKVLATPQRMAQLAEVDTDVAKFIAELVEFFGGAYMKERHYPGPPMH CCCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCC DPLAVAAVADPQVVRTILAPIDVETKGELTRGATVVDLRRTWGSQGGGQDPTALGTADDS CCEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHCCCCCCCCCCCEECCCCCC DFDATASATAADATGTAGQPGAADTTLRTRVAVDVDAERFWNLLVDALQRIGNTGF CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TQKIILDCDPGHDDAIAMLLAWGNPNLDLVAVTTVAGNQTLEKVTKNALALARVGNITG CCEEEEECCCCCCCEEEEEEEECCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCC IPFAAGADRPLVAPQIIPEEIHGDSGLDGPQLPAAGAELDSRHAVNLIADLIRDNEPGSV CCCCCCCCCCCCCHHCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEE TLVPTGALTSIALFARMYPELVKRVGGVTLMGGAHHAGNMTPSAEFNILADPEAAKIVFG EEEECCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCEEEEECCCCEEEEEE AGWPVTMVGLDVTHKVLATPQRMAQLAEVDTDVAKFIAELVEFFGGAYMKERHYPGPPMH CCCCEEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCC DPLAVAAVADPQVVRTILAPIDVETKGELTRGATVVDLRRTWGSQGGGQDPTALGTADDS CCEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHCCCCCCCCCCCEECCCCCC DFDATASATAADATGTAGQPGAADTTLRTRVAVDVDAERFWNLLVDALQRIGNTGF CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: N-D-ribosylpurine; H2O
Specific reaction: an N-D-ribosylpurine + H2O = D-ribose + a purine
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA