| Definition | Corynebacterium jeikeium K411, complete genome. |
|---|---|
| Accession | NC_007164 |
| Length | 2,462,499 |
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The map label for this gene is stp [H]
Identifier: 68537177
GI number: 68537177
Start: 2435862
End: 2437370
Strand: Direct
Name: stp [H]
Synonym: jk2082
Alternate gene names: 68537177
Gene position: 2435862-2437370 (Clockwise)
Preceding gene: 68537173
Following gene: 68537178
Centisome position: 98.92
GC content: 65.41
Gene sequence:
>1509_bases ATGAACTCCACCCATCCGCAATCCAACAACGCACCATCCGGAACGCCCCGAGGTGCGGCCGACGGAGCTACAACCTCTTC CACGGCTGCTTCCCCGGATCCGGTCGACTCCCGTCCCGGCGGTATCGGCCTGCTGATGACGGTGCTGATCACCGCGGCCG TCGCGTTCCAGCTGAACGCCTCCATGCTCTCCCCGGTGCTGGCCACCATGGCTCGCGAGCTGAACACCGACGAGGCCGCC ACGGGTCTCACCCAGACCGCCTTCTTCACCGGTGGAGCCATGTGCGGCCTGTTCCTGCCGCGGCTGTCGGACATTGTCGG CCGCCGGAAGATCCTCGTCATCATGCTGGGCGTGATGTCCCTCGGCGGCCTCATCGCCGCGCTGGCGCCCAACATTGGCG TGCTGATGGTCGCCCGCGCCATGCAGGGCATCGCCGGCCCCACGATCCCCATGACCCTGATCATCCTGCGCAGCCAGGTC AAGGAGGAAGTCCGCCTGGGCACGCTCATGGGTCTGCTCGCCGCCATCAACGGTGGCGTCGCTGGTATCGACGTGATCCT GGCCGGCTGGATGGCCGAGCAATGGGGCTTCCGCTCCGTGTTCTGGCTCATCGCCATCATCGGCATCATCGCCACTCTGG TCGTCGCCTTCGGCGCTCCGGAATCCAAGCCGTCGGACAATGTGAAAATGGACTGGGCGGGCGCTGCTCTGCTGGTGGTA TCGGTGCTGTGCATCACGTTGGGCGTCAATGAGGCAGGCAAGGCCGGGGCAGCGAACTGGCTGTACGTCATCGCCATGTT CATTGTCGGTGCGGCCGTCTTCCTAGCCTTCTGGAAGTACGAGAACCGCCACGACCAGCCACTGGTTGCCCCGAAATACC TGGCCCGCCGCCACACCTGGGCGCTGCTGGCCACCACGGTTCTGACCATGACCGGCGTGTTCGCAGCAGTCAACGGCCTG GCTATCTCCCTGGCTCAGAACCCGGATGCAGGCTTCGGCCTGGAGGCCGACAAGGCCTCCCTGTGGCTGCTGACCCCCTA CGCCCTCATTGGTTGGGCCGTAGGACCCTTCGCCGGACGCTGGGCACCGAAGGTGGGCTACGGACGGCTGATCATCATCG CCAACATCGCCAGCGCGGCTCTCATGCTGGCCTTGGCCTTCGTCGGCGTGCACTCCCTGCCGGTGCTGATCATCACCGTG ATCCTATTGGGCGTCACCTACGCGGGTATCGGCAACATCGTCATCAACAACCTGGGTGTGGTGAACTCCCCGAAGGATAA CGAGGGCTTCCTGCCCGGCATGAACTCCGCCGCCTTCAACCTGGGCGCAGGCGTGTCCTTCGCAGTGCTGCCGGTCTTCC AGGTCGCCGGCTCCCCGCAGGGTTCTGATTCCGTCACGGGTTATGTCACCGCGTTTATCGTCGCAGCGGTGATCCTCGGC ATCGCCGCGGCCGTGGCGGCGCTGATCCCGAAGCAGACCGTCGCGGAGCTCGACCGCGCCATCGTCTAA
Upstream 100 bases:
>100_bases TAAGAACCCAATGGTTAGCCCTTATCAATTACCTAACTATGCATTAGAGTGCTAGCTAAACGTTCTGCTGAAGTTTTGAC GTAACTCACGGGAGCCGACC
Downstream 100 bases:
>100_bases CCCTCCGGCGCACAATCAACGTCGGGCAGGCGCCCAACCCGCCGGTGCCGCGCGCCAATCCACGTTTCGGCCCCCGCAAG CCTACGCCCAACCCGCCCAC
Product: major facilitator superfamily permease
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: Spectinomycin tetracycline efflux pump [H]
Number of amino acids: Translated: 502; Mature: 502
Protein sequence:
>502_residues MNSTHPQSNNAPSGTPRGAADGATTSSTAASPDPVDSRPGGIGLLMTVLITAAVAFQLNASMLSPVLATMARELNTDEAA TGLTQTAFFTGGAMCGLFLPRLSDIVGRRKILVIMLGVMSLGGLIAALAPNIGVLMVARAMQGIAGPTIPMTLIILRSQV KEEVRLGTLMGLLAAINGGVAGIDVILAGWMAEQWGFRSVFWLIAIIGIIATLVVAFGAPESKPSDNVKMDWAGAALLVV SVLCITLGVNEAGKAGAANWLYVIAMFIVGAAVFLAFWKYENRHDQPLVAPKYLARRHTWALLATTVLTMTGVFAAVNGL AISLAQNPDAGFGLEADKASLWLLTPYALIGWAVGPFAGRWAPKVGYGRLIIIANIASAALMLALAFVGVHSLPVLIITV ILLGVTYAGIGNIVINNLGVVNSPKDNEGFLPGMNSAAFNLGAGVSFAVLPVFQVAGSPQGSDSVTGYVTAFIVAAVILG IAAAVAALIPKQTVAELDRAIV
Sequences:
>Translated_502_residues MNSTHPQSNNAPSGTPRGAADGATTSSTAASPDPVDSRPGGIGLLMTVLITAAVAFQLNASMLSPVLATMARELNTDEAA TGLTQTAFFTGGAMCGLFLPRLSDIVGRRKILVIMLGVMSLGGLIAALAPNIGVLMVARAMQGIAGPTIPMTLIILRSQV KEEVRLGTLMGLLAAINGGVAGIDVILAGWMAEQWGFRSVFWLIAIIGIIATLVVAFGAPESKPSDNVKMDWAGAALLVV SVLCITLGVNEAGKAGAANWLYVIAMFIVGAAVFLAFWKYENRHDQPLVAPKYLARRHTWALLATTVLTMTGVFAAVNGL AISLAQNPDAGFGLEADKASLWLLTPYALIGWAVGPFAGRWAPKVGYGRLIIIANIASAALMLALAFVGVHSLPVLIITV ILLGVTYAGIGNIVINNLGVVNSPKDNEGFLPGMNSAAFNLGAGVSFAVLPVFQVAGSPQGSDSVTGYVTAFIVAAVILG IAAAVAALIPKQTVAELDRAIV >Mature_502_residues MNSTHPQSNNAPSGTPRGAADGATTSSTAASPDPVDSRPGGIGLLMTVLITAAVAFQLNASMLSPVLATMARELNTDEAA TGLTQTAFFTGGAMCGLFLPRLSDIVGRRKILVIMLGVMSLGGLIAALAPNIGVLMVARAMQGIAGPTIPMTLIILRSQV KEEVRLGTLMGLLAAINGGVAGIDVILAGWMAEQWGFRSVFWLIAIIGIIATLVVAFGAPESKPSDNVKMDWAGAALLVV SVLCITLGVNEAGKAGAANWLYVIAMFIVGAAVFLAFWKYENRHDQPLVAPKYLARRHTWALLATTVLTMTGVFAAVNGL AISLAQNPDAGFGLEADKASLWLLTPYALIGWAVGPFAGRWAPKVGYGRLIIIANIASAALMLALAFVGVHSLPVLIITV ILLGVTYAGIGNIVINNLGVVNSPKDNEGFLPGMNSAAFNLGAGVSFAVLPVFQVAGSPQGSDSVTGYVTAFIVAAVILG IAAAVAALIPKQTVAELDRAIV
Specific function: Contributes to spectinomycin and tetracycline resistance [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. EmrB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004638 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR001411 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 51761; Mature: 51761
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSTHPQSNNAPSGTPRGAADGATTSSTAASPDPVDSRPGGIGLLMTVLITAAVAFQLNA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH SMLSPVLATMARELNTDEAATGLTQTAFFTGGAMCGLFLPRLSDIVGRRKILVIMLGVMS HHHHHHHHHHHHHCCCHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LGGLIAALAPNIGVLMVARAMQGIAGPTIPMTLIILRSQVKEEVRLGTLMGLLAAINGGV HHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH AGIDVILAGWMAEQWGFRSVFWLIAIIGIIATLVVAFGAPESKPSDNVKMDWAGAALLVV HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHH SVLCITLGVNEAGKAGAANWLYVIAMFIVGAAVFLAFWKYENRHDQPLVAPKYLARRHTW HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH ALLATTVLTMTGVFAAVNGLAISLAQNPDAGFGLEADKASLWLLTPYALIGWAVGPFAGR HHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCEEEECHHHHHHHHHCCCCCC WAPKVGYGRLIIIANIASAALMLALAFVGVHSLPVLIITVILLGVTYAGIGNIVINNLGV CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VNSPKDNEGFLPGMNSAAFNLGAGVSFAVLPVFQVAGSPQGSDSVTGYVTAFIVAAVILG CCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH IAAAVAALIPKQTVAELDRAIV HHHHHHHHCCHHHHHHHHHHCC >Mature Secondary Structure MNSTHPQSNNAPSGTPRGAADGATTSSTAASPDPVDSRPGGIGLLMTVLITAAVAFQLNA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH SMLSPVLATMARELNTDEAATGLTQTAFFTGGAMCGLFLPRLSDIVGRRKILVIMLGVMS HHHHHHHHHHHHHCCCHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LGGLIAALAPNIGVLMVARAMQGIAGPTIPMTLIILRSQVKEEVRLGTLMGLLAAINGGV HHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH AGIDVILAGWMAEQWGFRSVFWLIAIIGIIATLVVAFGAPESKPSDNVKMDWAGAALLVV HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHH SVLCITLGVNEAGKAGAANWLYVIAMFIVGAAVFLAFWKYENRHDQPLVAPKYLARRHTW HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH ALLATTVLTMTGVFAAVNGLAISLAQNPDAGFGLEADKASLWLLTPYALIGWAVGPFAGR HHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCEEEECHHHHHHHHHCCCCCC WAPKVGYGRLIIIANIASAALMLALAFVGVHSLPVLIITVILLGVTYAGIGNIVINNLGV CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VNSPKDNEGFLPGMNSAAFNLGAGVSFAVLPVFQVAGSPQGSDSVTGYVTAFIVAAVILG CCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH IAAAVAALIPKQTVAELDRAIV HHHHHHHHCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]