| Definition | Corynebacterium jeikeium K411, complete genome. |
|---|---|
| Accession | NC_007164 |
| Length | 2,462,499 |
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The map label for this gene is tgt [H]
Identifier: 68537115
GI number: 68537115
Start: 2358685
End: 2360133
Strand: Direct
Name: tgt [H]
Synonym: jk2020
Alternate gene names: 68537115
Gene position: 2358685-2360133 (Clockwise)
Preceding gene: 68537114
Following gene: 68537120
Centisome position: 95.78
GC content: 65.77
Gene sequence:
>1449_bases ATGGCCGACAATCAGGAAAACACCAGCGCGGACGCGGGCGCGGGCGCCGCAGACCTGTCCTTCGAGGTGCGCACCCGGCT GCGCGATAGCGAAAGTGCAAGCGCGGGAGCAGGCGCGGAAGGAAGCGCAGGCGCAGCTGCAAGCGCGGGAGCAGGCGCGG AAGGAAGCGCAGGCGGAAGCGCGGGAGCAGGCGCAGGCGCAGGCGGAAGCGCGCGCCTTAACGGAAGCGCGGGCGCGCTG GGGCGTACGGGCGTCATAAAGACTCCGCATGGGAACATCCACACCCCAGCTTTCATCCCGGTGGCGACGAAAGCAACGGT CAAGACCCTCACGCCCGAGCAGGTGCGGTCGACGGGCGCGCAGGCGATGCTTTCCAACGCGTACCACCTGTACCTTCAGC CGGGCCCGGACATTGTGGACGAGGGCGGCGGGCTCGCACAGTTCGAGAACTGGCACGGGCCGACGTACACGGACTCCGGC GGCTTCCAAGTCATGAGCCTCGGCGTGGGCTACAAGAAAGTCCTGGCCATGGACACGAAAGGCCGCAGCGAGGCGGACAT CATCCAGCAGCAGAAAAAGCGCATGGCCGTAGTGGACGAGGACGGCGTGGATTTCCGCAGCGTCATCGACGGCAGCAAGC ACCGCTTCACGCCGGAGGTGTCGATGCAGATCCAGCACCAGCTGGGCGCGGACATTATGTTCGCGTTCGACGAGCTCACC ACGCTGGTGAACACCCGCTCCTACCAGGAGCAATCCGTCGCACGTACGCACCGCTGGGCTCGCCGTTGCCTGGCGGAGCA CCAGCGGCTGACGGACTTGCGCACACACCGCCCGCTGCAGTCTCTGTGGGGCGTGGTGCAGGGCGCGCAGTACGAGGATC TGCGCAGGCAGGCGGCCCGTGGGCTGGTGCAGCTGTCCGAGGAGGCGGAGGCGCAGGGCAACCGTGGTTTCGGCGGCTTC GGCATCGGCGGCGCGCTGGAGAAGGAGAACCTCGGCACGATCGTCCGCTGGGTTGCCGAGGAGTTGCCGGAGGATAAGCC CCGCCACCTGCTCGGCATTTCGGAGCCGGATGACCTGTTCACGGCGATTGAGGCCGGCGCGGACACGTTCGATTGCGTCG CGCCGACTCGCCTGGGCCGCCGCGGTGGCGTGTACACGCTGGACGGTCGGCTGAATCTTATGGGTGCGCGGTTTAAGAGG GATTTTTCTCCTATTGACGCCGCAGTAGGCGGTTATGTCTCGGAGAATTATTCGCGCGCTTATATTCACCACTTGTTGAA GGCGAAGGAGTACCTGGCCGGGACGTTGTGCACCCTGCATAATCTGCATTTCATGGTGGGGTTGGTGGACCGGATTCGCG AGTCCATGGAGCAGGGGCGCTTCTATGAGTTCCGGGAGGAGTTCATGGGGCGCTACTACGGCCCGACGTGGCGGGAGCGG CTGGGCTAG
Upstream 100 bases:
>100_bases ACGGCGCGGCAGCCGGGAGTGCGGGAATCGGCGGTGTGGGATGGGGAATCGGCGGCGCGGAAAGGGGCGCCGGCGGAAGA GGAAGATAAAATAGGGCGCC
Downstream 100 bases:
>100_bases CGTTTGCCGGGGTTCCGTGGGCTGGCGGGGCGGCGAGTGCGCGGCATGGCCGCGCAGGGCGTGGCGGGTGCCTATGGCTC GGCAAGCCGAGCCACCCCAC
Product: queuine tRNA-ribosyltransferase
Products: NA
Alternate protein names: Guanine insertion enzyme; tRNA-guanine transglycosylase [H]
Number of amino acids: Translated: 482; Mature: 481
Protein sequence:
>482_residues MADNQENTSADAGAGAADLSFEVRTRLRDSESASAGAGAEGSAGAAASAGAGAEGSAGGSAGAGAGAGGSARLNGSAGAL GRTGVIKTPHGNIHTPAFIPVATKATVKTLTPEQVRSTGAQAMLSNAYHLYLQPGPDIVDEGGGLAQFENWHGPTYTDSG GFQVMSLGVGYKKVLAMDTKGRSEADIIQQQKKRMAVVDEDGVDFRSVIDGSKHRFTPEVSMQIQHQLGADIMFAFDELT TLVNTRSYQEQSVARTHRWARRCLAEHQRLTDLRTHRPLQSLWGVVQGAQYEDLRRQAARGLVQLSEEAEAQGNRGFGGF GIGGALEKENLGTIVRWVAEELPEDKPRHLLGISEPDDLFTAIEAGADTFDCVAPTRLGRRGGVYTLDGRLNLMGARFKR DFSPIDAAVGGYVSENYSRAYIHHLLKAKEYLAGTLCTLHNLHFMVGLVDRIRESMEQGRFYEFREEFMGRYYGPTWRER LG
Sequences:
>Translated_482_residues MADNQENTSADAGAGAADLSFEVRTRLRDSESASAGAGAEGSAGAAASAGAGAEGSAGGSAGAGAGAGGSARLNGSAGAL GRTGVIKTPHGNIHTPAFIPVATKATVKTLTPEQVRSTGAQAMLSNAYHLYLQPGPDIVDEGGGLAQFENWHGPTYTDSG GFQVMSLGVGYKKVLAMDTKGRSEADIIQQQKKRMAVVDEDGVDFRSVIDGSKHRFTPEVSMQIQHQLGADIMFAFDELT TLVNTRSYQEQSVARTHRWARRCLAEHQRLTDLRTHRPLQSLWGVVQGAQYEDLRRQAARGLVQLSEEAEAQGNRGFGGF GIGGALEKENLGTIVRWVAEELPEDKPRHLLGISEPDDLFTAIEAGADTFDCVAPTRLGRRGGVYTLDGRLNLMGARFKR DFSPIDAAVGGYVSENYSRAYIHHLLKAKEYLAGTLCTLHNLHFMVGLVDRIRESMEQGRFYEFREEFMGRYYGPTWRER LG >Mature_481_residues ADNQENTSADAGAGAADLSFEVRTRLRDSESASAGAGAEGSAGAAASAGAGAEGSAGGSAGAGAGAGGSARLNGSAGALG RTGVIKTPHGNIHTPAFIPVATKATVKTLTPEQVRSTGAQAMLSNAYHLYLQPGPDIVDEGGGLAQFENWHGPTYTDSGG FQVMSLGVGYKKVLAMDTKGRSEADIIQQQKKRMAVVDEDGVDFRSVIDGSKHRFTPEVSMQIQHQLGADIMFAFDELTT LVNTRSYQEQSVARTHRWARRCLAEHQRLTDLRTHRPLQSLWGVVQGAQYEDLRRQAARGLVQLSEEAEAQGNRGFGGFG IGGALEKENLGTIVRWVAEELPEDKPRHLLGISEPDDLFTAIEAGADTFDCVAPTRLGRRGGVYTLDGRLNLMGARFKRD FSPIDAAVGGYVSENYSRAYIHHLLKAKEYLAGTLCTLHNLHFMVGLVDRIRESMEQGRFYEFREEFMGRYYGPTWRERL G
Specific function: Exchanges the guanine residue with 7-aminomethyl-7- deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hyper
COG id: COG0343
COG function: function code J; Queuine/archaeosine tRNA-ribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the queuine tRNA-ribosyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI13654276, Length=402, Percent_Identity=35.0746268656716, Blast_Score=250, Evalue=2e-66, Organism=Escherichia coli, GI1786607, Length=393, Percent_Identity=37.6590330788804, Blast_Score=269, Evalue=3e-73, Organism=Caenorhabditis elegans, GI17544680, Length=401, Percent_Identity=32.1695760598504, Blast_Score=223, Evalue=1e-58, Organism=Drosophila melanogaster, GI19920510, Length=407, Percent_Identity=33.4152334152334, Blast_Score=243, Evalue=2e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004803 - InterPro: IPR002616 [H]
Pfam domain/function: PF01702 TGT [H]
EC number: =2.4.2.29 [H]
Molecular weight: Translated: 51998; Mature: 51866
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADNQENTSADAGAGAADLSFEVRTRLRDSESASAGAGAEGSAGAAASAGAGAEGSAGGS CCCCCCCCCCCCCCCCHHCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AGAGAGAGGSARLNGSAGALGRTGVIKTPHGNIHTPAFIPVATKATVKTLTPEQVRSTGA CCCCCCCCCCEEECCCCCCCCCCCEEECCCCCCCCCEEEEEECCHHHCCCCHHHHHHHHH QAMLSNAYHLYLQPGPDIVDEGGGLAQFENWHGPTYTDSGGFQVMSLGVGYKKVLAMDTK HHHHCCCEEEEECCCCCHHCCCCCEECCCCCCCCCCCCCCCCEEEEECCCHHHHEEECCC GRSEADIIQQQKKRMAVVDEDGVDFRSVIDGSKHRFTPEVSMQIQHQLGADIMFAFDELT CCCHHHHHHHHHHHEEEECCCCCCHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHH TLVNTRSYQEQSVARTHRWARRCLAEHQRLTDLRTHRPLQSLWGVVQGAQYEDLRRQAAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHH GLVQLSEEAEAQGNRGFGGFGIGGALEKENLGTIVRWVAEELPEDKPRHLLGISEPDDLF HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHH TAIEAGADTFDCVAPTRLGRRGGVYTLDGRLNLMGARFKRDFSPIDAAVGGYVSENYSRA HHHHCCCCCCHHCCCHHCCCCCCEEEECCCEEEHHHHHHCCCCHHHHHHCCHHHCCCHHH YIHHLLKAKEYLAGTLCTLHNLHFMVGLVDRIRESMEQGRFYEFREEFMGRYYGPTWRER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHH LG CC >Mature Secondary Structure ADNQENTSADAGAGAADLSFEVRTRLRDSESASAGAGAEGSAGAAASAGAGAEGSAGGS CCCCCCCCCCCCCCCHHCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AGAGAGAGGSARLNGSAGALGRTGVIKTPHGNIHTPAFIPVATKATVKTLTPEQVRSTGA CCCCCCCCCCEEECCCCCCCCCCCEEECCCCCCCCCEEEEEECCHHHCCCCHHHHHHHHH QAMLSNAYHLYLQPGPDIVDEGGGLAQFENWHGPTYTDSGGFQVMSLGVGYKKVLAMDTK HHHHCCCEEEEECCCCCHHCCCCCEECCCCCCCCCCCCCCCCEEEEECCCHHHHEEECCC GRSEADIIQQQKKRMAVVDEDGVDFRSVIDGSKHRFTPEVSMQIQHQLGADIMFAFDELT CCCHHHHHHHHHHHEEEECCCCCCHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHH TLVNTRSYQEQSVARTHRWARRCLAEHQRLTDLRTHRPLQSLWGVVQGAQYEDLRRQAAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHH GLVQLSEEAEAQGNRGFGGFGIGGALEKENLGTIVRWVAEELPEDKPRHLLGISEPDDLF HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCHHHH TAIEAGADTFDCVAPTRLGRRGGVYTLDGRLNLMGARFKRDFSPIDAAVGGYVSENYSRA HHHHCCCCCCHHCCCHHCCCCCCEEEECCCEEEHHHHHHCCCCHHHHHHCCHHHCCCHHH YIHHLLKAKEYLAGTLCTLHNLHFMVGLVDRIRESMEQGRFYEFREEFMGRYYGPTWRER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHH LG CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA