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The map label for this gene is alkM [H]

Identifier: 68537010

GI number: 68537010

Start: 2233123

End: 2234355

Strand: Direct

Name: alkM [H]

Synonym: jk1916

Alternate gene names: 68537010

Gene position: 2233123-2234355 (Clockwise)

Preceding gene: 68537009

Following gene: 68537011

Centisome position: 90.69

GC content: 61.07

Gene sequence:

>1233_bases
ATGACAACCACGCAAAACCCAGCGCACACAGCCAACGGCGCTAGCACCTCTCCCGGTACGGCTCCAGCCAAGCGCCCACC
CGGTTGGAAAGACTCCAAGAAGTACGCCTGGACTTTCAGCCTCGTTCCGGCGGCCATTCCACTGATCGTGTGGGGCGTTG
CCTCCTGGCTCAAAGCCATCAACGGCCCCGACCTGCTGATCCATGTCACCTGGTGGGCCGGCCCCATTGCCGTGTTTATC
CTGATCCCACTGGCGGACGTGATCCTCGGCCGCGATGGCGAGAACGTGCCGGAAGAGTTCGTCCCCTGGCTGGAAGAAAC
CAAGTACTACCGAGTGGTGACGTACCTCTACTTCCCCATCATGCTGGCCAGCCTCATTGCCTGCTGCTACCTATGGACCA
GCTCGGACCTGTTGATGATCGACCGCCTGGGCCTTGCCTGGTCTATGGGCATGAGCTCCGGCATCGGTATCGTCGCTGCC
CACGAACTAGGCCACAAGAAGGGCAGCTTCGAGCGTTGGATGGGCAAGATCACCCTGGCTGTCCCCGCCTACGGGCACTT
CTACATCGAGCACAACAAGGGTCACCACGTTAAGGTCGCCACCCCGGAGGATCCGGTGAGCTCCCGCATGGGCGAGAACG
TCTACACCTACCTGGTCCGATCCATCCCTCACCAGATCCCACGCGCCTGGAACATCGAGAAGAAGCGTCTGGCGCGCAAG
GGCAAGTCCCAATTCCACCTCAGCAATGAGGTGCTGAACGCTTGGCTGGTCACCGTGCTGGTCTGGGGCGGGCTGTTCAT
CGCCTTCGGCATCTACATTCTGCCGTGGATGCTAATCCAGGCCGTGCTGGGCATCGCCTTGCTGGAGTTCGTGAACTACC
TAGAGCACTACGGCCTGTTGCGGCAGATGCAGCCGGATGGCCGCTACGAGCGCTGCACCCCGGAGCACTCCTGGAACTCC
GACAATCTGACCACCAATATTTTCCTCTACCAGCTTCAGCGCCACTCGGATCACCACGCGAATCCGACGCGCCGCTACCA
GTCGCTGCGCTCGGACGTGAAAGCTCCGGAGCTGCCAGCCGGCTACGCGACGATGATCGCCATGGCTTCGATTCCGCCGC
TGTGGTTCAAGGTCATGGATAGCCGCCTGATGAAGCACTACAACTACGACGTCTCCAAGGCGAACGTCCTGCCTGGCAAG
GAAGAGAAGCTGGCTGCGAGGTGGCAGCGATGA

Upstream 100 bases:

>100_bases
CATTCGTGGGCCATACGTGCACGACTCGCACGCCAACTAGATACCAACTGAATACCAACCCCACACCATCGATATGCACA
GGAATGCAGGTGAGTCGACG

Downstream 100 bases:

>100_bases
GCACGACCGCCCCAACCGGAAGCACCATCAACCCACCCAACCCAACCACTCACTACCTGCTCAGTGGCGCTGGCACGGCG
GTCGGTGCTTTCTTCCTACT

Product: alkane-1 monooxygenase

Products: NA

Alternate protein names: Alkane hydroxylase; AHs; Terminal alkane hydroxylase [H]

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MTTTQNPAHTANGASTSPGTAPAKRPPGWKDSKKYAWTFSLVPAAIPLIVWGVASWLKAINGPDLLIHVTWWAGPIAVFI
LIPLADVILGRDGENVPEEFVPWLEETKYYRVVTYLYFPIMLASLIACCYLWTSSDLLMIDRLGLAWSMGMSSGIGIVAA
HELGHKKGSFERWMGKITLAVPAYGHFYIEHNKGHHVKVATPEDPVSSRMGENVYTYLVRSIPHQIPRAWNIEKKRLARK
GKSQFHLSNEVLNAWLVTVLVWGGLFIAFGIYILPWMLIQAVLGIALLEFVNYLEHYGLLRQMQPDGRYERCTPEHSWNS
DNLTTNIFLYQLQRHSDHHANPTRRYQSLRSDVKAPELPAGYATMIAMASIPPLWFKVMDSRLMKHYNYDVSKANVLPGK
EEKLAARWQR

Sequences:

>Translated_410_residues
MTTTQNPAHTANGASTSPGTAPAKRPPGWKDSKKYAWTFSLVPAAIPLIVWGVASWLKAINGPDLLIHVTWWAGPIAVFI
LIPLADVILGRDGENVPEEFVPWLEETKYYRVVTYLYFPIMLASLIACCYLWTSSDLLMIDRLGLAWSMGMSSGIGIVAA
HELGHKKGSFERWMGKITLAVPAYGHFYIEHNKGHHVKVATPEDPVSSRMGENVYTYLVRSIPHQIPRAWNIEKKRLARK
GKSQFHLSNEVLNAWLVTVLVWGGLFIAFGIYILPWMLIQAVLGIALLEFVNYLEHYGLLRQMQPDGRYERCTPEHSWNS
DNLTTNIFLYQLQRHSDHHANPTRRYQSLRSDVKAPELPAGYATMIAMASIPPLWFKVMDSRLMKHYNYDVSKANVLPGK
EEKLAARWQR
>Mature_409_residues
TTTQNPAHTANGASTSPGTAPAKRPPGWKDSKKYAWTFSLVPAAIPLIVWGVASWLKAINGPDLLIHVTWWAGPIAVFIL
IPLADVILGRDGENVPEEFVPWLEETKYYRVVTYLYFPIMLASLIACCYLWTSSDLLMIDRLGLAWSMGMSSGIGIVAAH
ELGHKKGSFERWMGKITLAVPAYGHFYIEHNKGHHVKVATPEDPVSSRMGENVYTYLVRSIPHQIPRAWNIEKKRLARKG
KSQFHLSNEVLNAWLVTVLVWGGLFIAFGIYILPWMLIQAVLGIALLEFVNYLEHYGLLRQMQPDGRYERCTPEHSWNSD
NLTTNIFLYQLQRHSDHHANPTRRYQSLRSDVKAPELPAGYATMIAMASIPPLWFKVMDSRLMKHYNYDVSKANVLPGKE
EKLAARWQR

Specific function: Catalyzes the hydroxylation of n-alkanes and fatty acids in the presence of a NADH-rubredoxin reductase and rubredoxin. It preferably hydroxylases C5-C12 hydrocarbones [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fatty acid desaturase family. AlkB subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005804 [H]

Pfam domain/function: PF00487 FA_desaturase [H]

EC number: =1.14.15.3 [H]

Molecular weight: Translated: 46537; Mature: 46405

Theoretical pI: Translated: 9.55; Mature: 9.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTQNPAHTANGASTSPGTAPAKRPPGWKDSKKYAWTFSLVPAAIPLIVWGVASWLKAI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHC
NGPDLLIHVTWWAGPIAVFILIPLADVILGRDGENVPEEFVPWLEETKYYRVVTYLYFPI
CCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHH
MLASLIACCYLWTSSDLLMIDRLGLAWSMGMSSGIGIVAAHELGHKKGSFERWMGKITLA
HHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCCEEEEHHHCCCCCCHHHHHCEEEEE
VPAYGHFYIEHNKGHHVKVATPEDPVSSRMGENVYTYLVRSIPHQIPRAWNIEKKRLARK
EECCEEEEEECCCCCEEEEECCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHC
GKSQFHLSNEVLNAWLVTVLVWGGLFIAFGIYILPWMLIQAVLGIALLEFVNYLEHYGLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQMQPDGRYERCTPEHSWNSDNLTTNIFLYQLQRHSDHHANPTRRYQSLRSDVKAPELPA
HHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEHHCCCCCCCHHHHHHHHHHHCCCCCCCC
GYATMIAMASIPPLWFKVMDSRLMKHYNYDVSKANVLPGKEEKLAARWQR
CHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCC
>Mature Secondary Structure 
TTTQNPAHTANGASTSPGTAPAKRPPGWKDSKKYAWTFSLVPAAIPLIVWGVASWLKAI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHC
NGPDLLIHVTWWAGPIAVFILIPLADVILGRDGENVPEEFVPWLEETKYYRVVTYLYFPI
CCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHH
MLASLIACCYLWTSSDLLMIDRLGLAWSMGMSSGIGIVAAHELGHKKGSFERWMGKITLA
HHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCCEEEEHHHCCCCCCHHHHHCEEEEE
VPAYGHFYIEHNKGHHVKVATPEDPVSSRMGENVYTYLVRSIPHQIPRAWNIEKKRLARK
EECCEEEEEECCCCCEEEEECCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHC
GKSQFHLSNEVLNAWLVTVLVWGGLFIAFGIYILPWMLIQAVLGIALLEFVNYLEHYGLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQMQPDGRYERCTPEHSWNSDNLTTNIFLYQLQRHSDHHANPTRRYQSLRSDVKAPELPA
HHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEHHCCCCCCCHHHHHHHHHHHCCCCCCCC
GYATMIAMASIPPLWFKVMDSRLMKHYNYDVSKANVLPGKEEKLAARWQR
CHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA