| Definition | Corynebacterium jeikeium K411, complete genome. |
|---|---|
| Accession | NC_007164 |
| Length | 2,462,499 |
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The map label for this gene is icd [H]
Identifier: 68536783
GI number: 68536783
Start: 1971783
End: 1974011
Strand: Direct
Name: icd [H]
Synonym: jk1693
Alternate gene names: 68536783
Gene position: 1971783-1974011 (Clockwise)
Preceding gene: 68536769
Following gene: 68536784
Centisome position: 80.07
GC content: 61.91
Gene sequence:
>2229_bases ATGGCAAAGATCATCTACACCCGCACCGACGAAGCCCCACTCTTGGCGACGTATTCTTTGAAGCCGATTGTGGAGGCTTT TGCTTCGACCTCTGGAGTGGATGTGGAGACCCGCGATATTTCGCTGGCCGCCCGCATCCTGGCTGCGTTCTCCGACGTGC TGCCCGAGGAGCAGAAGGTTGACGATGCCCTGGCTGAGCTCGGCGAGCTGGCCAAGACCCCGGATGCGAACATCATTAAG CTGCCGAACATCTCTGCGTCTATCCCGCAGCTGCAGGCAGCCATCGCGGAGCTGCAGAAGGCGGGCTACGACCTGCCGGA CTATCCGTCCGAGCCGAAGACCGACGAGGAACGCGACGCGCAGGCTCGCTACGACTCCGTGAAGGGCTCCGCAGTTAACC CGGTGCTGCGCGAAGGAAACTCCGACCGCCGCGCCCCGAAGGCCGTGAAGAACTTCGCCCGCAAGCACCCGCACTCCATG GGCAAGTGGTCGCCGGATTCCAAGACGAACGTCGCCACGATGGAGGCCGATGACTTCCGCCACAACGAGCAGTCGGTCAT CATGGATGGCGATGACACACTGCGCATCCAGCTGGTCAAGCCGAACGGTGAGACACAGGTGCTGAAGGAAGAGCTGCCGG TGCTGGACAAGGAGATTATTGACGCCACCGTGATGCGCGCCGAGGCTCTCAGCACCTTCTTCCGGGCTCAGGTGGCTCGC GCTAAGGCGGAGGGCGTGCTGTTCTCCGTGCACCTGAAGGCCACGATGATGAAGGTCTCCGACCCGATTATGTTCGGCCA CGCGGTGCGCGCATACTTCCACGACGTGTTCGAGCAGTACGGTGACCAGCTGCTGTCGGCAGGCCTGAATGGCGAAAACG GCCTGGGCGCCATCCTGGACGCGCTGGACGCAGACAAGGTAGAAAACGCGGCCGAGATCCGCGAAGCCTTCGACAAGGCT CTGGCCGACGGCCCGGATCTGGCGATGGTGAACTCCGATAAGGGCATCACCAATCTGCACGTCCCTTCCGACGTGATTGT GGACGCATCCATGCCGGCGATGATCCGTACCTCCGGCCAGATGTGGAACAAGAACGACGAGACCGAGGATACGCTGGCGG TTCTGCCGGATTCCTCCTACGCGGGCATCTACCAGGTGGTTATCGATGACTGCCGTAAGAATGGCGCGTTCGACCCGACC ACCATGGGCACTGTGCCGAATGTGGGTCTTATGGCGCAGAAGGCGGAGGAGTACGGCTCCCACGACAAGACCTTCCGCAT CGAGTCCGAGGGTCGAGTACAGGTGCTGAATAGCGCTGGCGATGTGCTGATGGAGCACGAGGTAGCTGCAGGTGACATCT GGCGTGCTTGCCAGGCCAAGGACATCCCGCTGCAGGACTGGGTAAAGCTGGCCGTGAAGCGCGCCGCCGCTACCGGCGCC CCGGCTGTGTTCTGGCTGGATCCGGAGCGCGCACACGACAGGAACGTGCAGAAGCAGGTGGAGACCTACCTGAAGGATCA CGACACTGAGGGTCTGGATATCCGCATTTTGCCTCCGGAAGAGGCCATGCAGCTGTCCATCGACCGCATCCGTGCTGGCG AGGATACGATTTCCGTCACCGGTAACGTGCTGCGCGATTACCTGACGGACCTGTTCCCGATCATGGAGCTGGGCACGTCC GCGAAGATGCTGTCCGTCGTGCCGCTAATCGCCGGCGGTGGCTTGTTCGAGACTGGTGCGGGCGGTTCCGCACCGAAGCA CGTGGCGCAGCTGGTGGAGGAGAACCACCTGCGTTGGGATTCCCTAGGTGAGTTCCTGGCCCTGGCGGAGTCCCTGCGCA AGCTGCAGGAGACCGACGACAACCCGCGCACCCCGATCTTGGGCGACGCACTGGATGCCGCCACCGAGTCCGTGCTGAAC GAGTCGAAGTCCCCGTCCCGCAAGGTCGGCGAAATCGACAACCGCGGTTCTCACTTCTACCTGGCGAAGTTCTGGGCTCG CGAGCTGGCTGACCAGACTCGCGATGCAGAGCTGGCGGAGATCTTTAAGCCTGTTGCTGACGCCCTCGAGGCCAACGAGG CGAAGATCTCCCAGGAGCTACTGGATATTCAGGGCCACGAGGTGGATCTGGGCGGTTACTACTGGCCGAACGATGAGAAA ACGATCGCTGTGATGCGTCCGTCCTCTACTTTCAACGAGATCATCGACGGCCTGAACACCAACAAGTAG
Upstream 100 bases:
>100_bases TAACCCCGTACCATTCACAGGTTTGTCATTTGCCGTATTCTTGGATCGTAAACCACTAAAAGACCAACTGACTAACTAGA GGCTGGGAGACGAACGCCAC
Downstream 100 bases:
>100_bases TCGTTGGGCTGGCTGGGCTCTGGGCCCTGGGCCGCGGCCCCATCCCACTGGCTCTCGGCTCGAGCCCGCCGAATCTCGGC TCGCGATAACCCCAGCGCTT
Product: isocitrate dehydrogenase
Products: NA
Alternate protein names: IDH; Oxalosuccinate decarboxylase [H]
Number of amino acids: Translated: 742; Mature: 741
Protein sequence:
>742_residues MAKIIYTRTDEAPLLATYSLKPIVEAFASTSGVDVETRDISLAARILAAFSDVLPEEQKVDDALAELGELAKTPDANIIK LPNISASIPQLQAAIAELQKAGYDLPDYPSEPKTDEERDAQARYDSVKGSAVNPVLREGNSDRRAPKAVKNFARKHPHSM GKWSPDSKTNVATMEADDFRHNEQSVIMDGDDTLRIQLVKPNGETQVLKEELPVLDKEIIDATVMRAEALSTFFRAQVAR AKAEGVLFSVHLKATMMKVSDPIMFGHAVRAYFHDVFEQYGDQLLSAGLNGENGLGAILDALDADKVENAAEIREAFDKA LADGPDLAMVNSDKGITNLHVPSDVIVDASMPAMIRTSGQMWNKNDETEDTLAVLPDSSYAGIYQVVIDDCRKNGAFDPT TMGTVPNVGLMAQKAEEYGSHDKTFRIESEGRVQVLNSAGDVLMEHEVAAGDIWRACQAKDIPLQDWVKLAVKRAAATGA PAVFWLDPERAHDRNVQKQVETYLKDHDTEGLDIRILPPEEAMQLSIDRIRAGEDTISVTGNVLRDYLTDLFPIMELGTS AKMLSVVPLIAGGGLFETGAGGSAPKHVAQLVEENHLRWDSLGEFLALAESLRKLQETDDNPRTPILGDALDAATESVLN ESKSPSRKVGEIDNRGSHFYLAKFWARELADQTRDAELAEIFKPVADALEANEAKISQELLDIQGHEVDLGGYYWPNDEK TIAVMRPSSTFNEIIDGLNTNK
Sequences:
>Translated_742_residues MAKIIYTRTDEAPLLATYSLKPIVEAFASTSGVDVETRDISLAARILAAFSDVLPEEQKVDDALAELGELAKTPDANIIK LPNISASIPQLQAAIAELQKAGYDLPDYPSEPKTDEERDAQARYDSVKGSAVNPVLREGNSDRRAPKAVKNFARKHPHSM GKWSPDSKTNVATMEADDFRHNEQSVIMDGDDTLRIQLVKPNGETQVLKEELPVLDKEIIDATVMRAEALSTFFRAQVAR AKAEGVLFSVHLKATMMKVSDPIMFGHAVRAYFHDVFEQYGDQLLSAGLNGENGLGAILDALDADKVENAAEIREAFDKA LADGPDLAMVNSDKGITNLHVPSDVIVDASMPAMIRTSGQMWNKNDETEDTLAVLPDSSYAGIYQVVIDDCRKNGAFDPT TMGTVPNVGLMAQKAEEYGSHDKTFRIESEGRVQVLNSAGDVLMEHEVAAGDIWRACQAKDIPLQDWVKLAVKRAAATGA PAVFWLDPERAHDRNVQKQVETYLKDHDTEGLDIRILPPEEAMQLSIDRIRAGEDTISVTGNVLRDYLTDLFPIMELGTS AKMLSVVPLIAGGGLFETGAGGSAPKHVAQLVEENHLRWDSLGEFLALAESLRKLQETDDNPRTPILGDALDAATESVLN ESKSPSRKVGEIDNRGSHFYLAKFWARELADQTRDAELAEIFKPVADALEANEAKISQELLDIQGHEVDLGGYYWPNDEK TIAVMRPSSTFNEIIDGLNTNK >Mature_741_residues AKIIYTRTDEAPLLATYSLKPIVEAFASTSGVDVETRDISLAARILAAFSDVLPEEQKVDDALAELGELAKTPDANIIKL PNISASIPQLQAAIAELQKAGYDLPDYPSEPKTDEERDAQARYDSVKGSAVNPVLREGNSDRRAPKAVKNFARKHPHSMG KWSPDSKTNVATMEADDFRHNEQSVIMDGDDTLRIQLVKPNGETQVLKEELPVLDKEIIDATVMRAEALSTFFRAQVARA KAEGVLFSVHLKATMMKVSDPIMFGHAVRAYFHDVFEQYGDQLLSAGLNGENGLGAILDALDADKVENAAEIREAFDKAL ADGPDLAMVNSDKGITNLHVPSDVIVDASMPAMIRTSGQMWNKNDETEDTLAVLPDSSYAGIYQVVIDDCRKNGAFDPTT MGTVPNVGLMAQKAEEYGSHDKTFRIESEGRVQVLNSAGDVLMEHEVAAGDIWRACQAKDIPLQDWVKLAVKRAAATGAP AVFWLDPERAHDRNVQKQVETYLKDHDTEGLDIRILPPEEAMQLSIDRIRAGEDTISVTGNVLRDYLTDLFPIMELGTSA KMLSVVPLIAGGGLFETGAGGSAPKHVAQLVEENHLRWDSLGEFLALAESLRKLQETDDNPRTPILGDALDAATESVLNE SKSPSRKVGEIDNRGSHFYLAKFWARELADQTRDAELAEIFKPVADALEANEAKISQELLDIQGHEVDLGGYYWPNDEKT IAVMRPSSTFNEIIDGLNTNK
Specific function: Unknown
COG id: COG2838
COG function: function code C; Monomeric isocitrate dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the monomeric-type IDH family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001804 - InterPro: IPR004436 [H]
Pfam domain/function: PF03971 IDH [H]
EC number: =1.1.1.42 [H]
Molecular weight: Translated: 81287; Mature: 81156
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKIIYTRTDEAPLLATYSLKPIVEAFASTSGVDVETRDISLAARILAAFSDVLPEEQKV CCEEEEEECCCCCEEEECCHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCHHHH DDALAELGELAKTPDANIIKLPNISASIPQLQAAIAELQKAGYDLPDYPSEPKTDEERDA HHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH QARYDSVKGSAVNPVLREGNSDRRAPKAVKNFARKHPHSMGKWSPDSKTNVATMEADDFR HHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECHHCC HNEQSVIMDGDDTLRIQLVKPNGETQVLKEELPVLDKEIIDATVMRAEALSTFFRAQVAR CCCCEEEECCCCEEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AKAEGVLFSVHLKATMMKVSDPIMFGHAVRAYFHDVFEQYGDQLLSAGLNGENGLGAILD HHHCCEEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH ALDADKVENAAEIREAFDKALADGPDLAMVNSDKGITNLHVPSDVIVDASMPAMIRTSGQ HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCEEECCCCCHHHHCCCC MWNKNDETEDTLAVLPDSSYAGIYQVVIDDCRKNGAFDPTTMGTVPNVGLMAQKAEEYGS CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCC HDKTFRIESEGRVQVLNSAGDVLMEHEVAAGDIWRACQAKDIPLQDWVKLAVKRAAATGA CCCEEEECCCCCEEEECCCCCHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC PAVFWLDPERAHDRNVQKQVETYLKDHDTEGLDIRILPPEEAMQLSIDRIRAGEDTISVT CEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCEEHH GNVLRDYLTDLFPIMELGTSAKMLSVVPLIAGGGLFETGAGGSAPKHVAQLVEENHLRWD HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHCCCCHH SLGEFLALAESLRKLQETDDNPRTPILGDALDAATESVLNESKSPSRKVGEIDNRGSHFY HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHCCCCCCCCEEH LAKFWARELADQTRDAELAEIFKPVADALEANEAKISQELLDIQGHEVDLGGYYWPNDEK HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCEEECCCEECCCCCC TIAVMRPSSTFNEIIDGLNTNK EEEEECCCHHHHHHHCCCCCCC >Mature Secondary Structure AKIIYTRTDEAPLLATYSLKPIVEAFASTSGVDVETRDISLAARILAAFSDVLPEEQKV CEEEEEECCCCCEEEECCHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHCCCHHHH DDALAELGELAKTPDANIIKLPNISASIPQLQAAIAELQKAGYDLPDYPSEPKTDEERDA HHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH QARYDSVKGSAVNPVLREGNSDRRAPKAVKNFARKHPHSMGKWSPDSKTNVATMEADDFR HHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECHHCC HNEQSVIMDGDDTLRIQLVKPNGETQVLKEELPVLDKEIIDATVMRAEALSTFFRAQVAR CCCCEEEECCCCEEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AKAEGVLFSVHLKATMMKVSDPIMFGHAVRAYFHDVFEQYGDQLLSAGLNGENGLGAILD HHHCCEEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH ALDADKVENAAEIREAFDKALADGPDLAMVNSDKGITNLHVPSDVIVDASMPAMIRTSGQ HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEECCCCEEECCCCCHHHHCCCC MWNKNDETEDTLAVLPDSSYAGIYQVVIDDCRKNGAFDPTTMGTVPNVGLMAQKAEEYGS CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCC HDKTFRIESEGRVQVLNSAGDVLMEHEVAAGDIWRACQAKDIPLQDWVKLAVKRAAATGA CCCEEEECCCCCEEEECCCCCHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC PAVFWLDPERAHDRNVQKQVETYLKDHDTEGLDIRILPPEEAMQLSIDRIRAGEDTISVT CEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCEEHH GNVLRDYLTDLFPIMELGTSAKMLSVVPLIAGGGLFETGAGGSAPKHVAQLVEENHLRWD HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHCCCCHH SLGEFLALAESLRKLQETDDNPRTPILGDALDAATESVLNESKSPSRKVGEIDNRGSHFY HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHCCCCCCCCEEH LAKFWARELADQTRDAELAEIFKPVADALEANEAKISQELLDIQGHEVDLGGYYWPNDEK HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCEEECCCEECCCCCC TIAVMRPSSTFNEIIDGLNTNK EEEEECCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12840036 [H]