| Definition | Corynebacterium jeikeium K411, complete genome. |
|---|---|
| Accession | NC_007164 |
| Length | 2,462,499 |
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The map label for this gene is aroP [H]
Identifier: 68536477
GI number: 68536477
Start: 1651264
End: 1652727
Strand: Direct
Name: aroP [H]
Synonym: jk1391
Alternate gene names: 68536477
Gene position: 1651264-1652727 (Clockwise)
Preceding gene: 68536471
Following gene: 68536478
Centisome position: 67.06
GC content: 59.63
Gene sequence:
>1464_bases ATGAAGACTCGAGAATCCAATTCAGGTGCCACGGAAGGCACCTCTAACCAGCTGGGTCACAGCCTAGAAACCCGGCACCT AACAATGATGGGCTTGGGCTCAGCCATCGGCGCTGGTCTTTTCCTCGGTACCGGCGTGGGCATCCAAGCTGCAGGTCCGG CCGTGCTGCTTTCCTACGTCGTCGCCGGCATTGTGGTGATCGCTGTGATGCAGATGCTGGGAGAGCTCGCCGCCGCCCGC CCTGCATCCGGCACCTTCGCCACCTACGGCCAGATGGCTTTCGGCCGCTGGAACGGCTTCGCCTTGGGTTGGCTGTACTG GTTCATGCTGATCATGGTGATGGGCGCTGAGATCACCGGCGCCGGAGCGATCATGGGTGCATGGTTCGGCGTGGAAGGTT GGATCCCAGGCCTTGTATGCGTGGTGCTGTTCACTATCGTGAACTTGGCTGGTGTCCGCGGCTTTGGCGAGTTCGAATAC TGGTTTGCCTTCATTAAGGTGGCCGTCATCATCGTTTTCTTGGTCATCGGCACGGGACTGCTGCTGGGGCTGTTCCCCAA CTATGATTCCCCTGGCCTGAGCCATTTCTCCGACTTCGCCCCCAACGGCATTTCTGGCATGGCAGTAGGCCTGCTAGCCG TGGCCTTCGCCTTCGGCGGCATCGAGATCGTAACGATCGCCGCCGCGGAATCGAAGGATCCGGCGAACTCCATTGCCGCC GCGGTGCGCGCCGTCATTTGGCGCATTTCCGTGTTCTATTTGGGTAGCGTCTTCCTGATCTCCGCCTTGCTGCCCTTCGA AACCCTGGGTGAGGCCGAGTCCGCTGAGGAGTCTCCGTTCACCCGCATCCTGGCTCTCGCGCAGATTCCGGGCATCGTGG AGATCATGGAAGCCGTAATCGTCTTGGCGCTGCTGTCGGCCTTTAACGCACAGATCTATGCGACCAGCCGCCTGATGTAC AGCTTCTCCCAAGAGCGCAACGTGCCGCGATGGTTCGGTAAGACAAATTCCCAGAAGGTGCCCTACCGCGCCGTGTGGTG TTCCCTGTTCTTCGCCTTCGTCTCCGTGGCGCTGCAAGTGTGGGGTCCAGAGAACCTGATCAACATCCTGTTCAACGCCG TCGGCGGCACCCTGCTGGTCATTTGGATGGTCATCGTGTTGGCTCAGATCAAGCTACGCCCCACCTTCGAACGTGACGGC AGCCTGACTGTGCGCATGGTGGGCTACCCCGTACTGTCGTGGCTAACCTTCCTGGCGCTTATCGCCCTGACTGTCCTAAT GCTCTTCGACAACAGCGCCCGTTTGCAGGTTCTCACCGTCACCATAGCTTTTGTCGTCTTGAGCCTGATCGGCCTAGTGC TACAGAAGACGCAGGGGCCGCAGCAATCCAACGAAAATGCTGATGCTGCTAGTACTGCTGGCGTTGCCGGAACCACTGCG ACAAACAGCGACCCCAACGCATAG
Upstream 100 bases:
>100_bases AACAGGCGGGTGGTCCGCGGGATGAAAAAGTATACCCGCCGCAGGGGCTAAAAGTACCCATGCTGGCCTTTACCAGGAGC AGTTGTGTTCTAATTTCGGT
Downstream 100 bases:
>100_bases ACACCAACACAAATGTAGGATCGACAACCATGACTTCTGCTTATGGAAATGGATTTGCCACCCTGACCGATTCTGGCGAT GTGCTGGACACCTGGTTCTT
Product: aromatic amino acid transport protein
Products: Proton [Cytoplasm]; 4-aminobutyrate [Cytoplasm] [C]
Alternate protein names: General aromatic amino acid permease [H]
Number of amino acids: Translated: 487; Mature: 487
Protein sequence:
>487_residues MKTRESNSGATEGTSNQLGHSLETRHLTMMGLGSAIGAGLFLGTGVGIQAAGPAVLLSYVVAGIVVIAVMQMLGELAAAR PASGTFATYGQMAFGRWNGFALGWLYWFMLIMVMGAEITGAGAIMGAWFGVEGWIPGLVCVVLFTIVNLAGVRGFGEFEY WFAFIKVAVIIVFLVIGTGLLLGLFPNYDSPGLSHFSDFAPNGISGMAVGLLAVAFAFGGIEIVTIAAAESKDPANSIAA AVRAVIWRISVFYLGSVFLISALLPFETLGEAESAEESPFTRILALAQIPGIVEIMEAVIVLALLSAFNAQIYATSRLMY SFSQERNVPRWFGKTNSQKVPYRAVWCSLFFAFVSVALQVWGPENLINILFNAVGGTLLVIWMVIVLAQIKLRPTFERDG SLTVRMVGYPVLSWLTFLALIALTVLMLFDNSARLQVLTVTIAFVVLSLIGLVLQKTQGPQQSNENADAASTAGVAGTTA TNSDPNA
Sequences:
>Translated_487_residues MKTRESNSGATEGTSNQLGHSLETRHLTMMGLGSAIGAGLFLGTGVGIQAAGPAVLLSYVVAGIVVIAVMQMLGELAAAR PASGTFATYGQMAFGRWNGFALGWLYWFMLIMVMGAEITGAGAIMGAWFGVEGWIPGLVCVVLFTIVNLAGVRGFGEFEY WFAFIKVAVIIVFLVIGTGLLLGLFPNYDSPGLSHFSDFAPNGISGMAVGLLAVAFAFGGIEIVTIAAAESKDPANSIAA AVRAVIWRISVFYLGSVFLISALLPFETLGEAESAEESPFTRILALAQIPGIVEIMEAVIVLALLSAFNAQIYATSRLMY SFSQERNVPRWFGKTNSQKVPYRAVWCSLFFAFVSVALQVWGPENLINILFNAVGGTLLVIWMVIVLAQIKLRPTFERDG SLTVRMVGYPVLSWLTFLALIALTVLMLFDNSARLQVLTVTIAFVVLSLIGLVLQKTQGPQQSNENADAASTAGVAGTTA TNSDPNA >Mature_487_residues MKTRESNSGATEGTSNQLGHSLETRHLTMMGLGSAIGAGLFLGTGVGIQAAGPAVLLSYVVAGIVVIAVMQMLGELAAAR PASGTFATYGQMAFGRWNGFALGWLYWFMLIMVMGAEITGAGAIMGAWFGVEGWIPGLVCVVLFTIVNLAGVRGFGEFEY WFAFIKVAVIIVFLVIGTGLLLGLFPNYDSPGLSHFSDFAPNGISGMAVGLLAVAFAFGGIEIVTIAAAESKDPANSIAA AVRAVIWRISVFYLGSVFLISALLPFETLGEAESAEESPFTRILALAQIPGIVEIMEAVIVLALLSAFNAQIYATSRLMY SFSQERNVPRWFGKTNSQKVPYRAVWCSLFFAFVSVALQVWGPENLINILFNAVGGTLLVIWMVIVLAQIKLRPTFERDG SLTVRMVGYPVLSWLTFLALIALTVLMLFDNSARLQVLTVTIAFVVLSLIGLVLQKTQGPQQSNENADAASTAGVAGTTA TNSDPNA
Specific function: Permease that is involved in the transport across the cytoplasmic membrane of the aromatic amino acids [H]
COG id: COG1113
COG function: function code E; Gamma-aminobutyrate permease and related permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Amino acid transporter (AAT) (TC 2.A.3.1) family [H]
Homologues:
Organism=Escherichia coli, GI1789017, Length=429, Percent_Identity=38.4615384615385, Blast_Score=305, Evalue=3e-84, Organism=Escherichia coli, GI1786302, Length=452, Percent_Identity=31.6371681415929, Blast_Score=242, Evalue=3e-65, Organism=Escherichia coli, GI1786789, Length=457, Percent_Identity=35.0109409190372, Blast_Score=242, Evalue=5e-65, Organism=Escherichia coli, GI87081708, Length=478, Percent_Identity=32.4267782426778, Blast_Score=238, Evalue=9e-64, Organism=Escherichia coli, GI1788480, Length=405, Percent_Identity=35.8024691358025, Blast_Score=236, Evalue=2e-63, Organism=Escherichia coli, GI87081915, Length=462, Percent_Identity=34.8484848484849, Blast_Score=229, Evalue=4e-61, Organism=Escherichia coli, GI1786602, Length=460, Percent_Identity=33.9130434782609, Blast_Score=221, Evalue=1e-58, Organism=Escherichia coli, GI48994972, Length=430, Percent_Identity=32.5581395348837, Blast_Score=213, Evalue=2e-56, Organism=Escherichia coli, GI1790653, Length=461, Percent_Identity=27.114967462039, Blast_Score=197, Evalue=1e-51, Organism=Escherichia coli, GI87082250, Length=338, Percent_Identity=24.5562130177515, Blast_Score=72, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17533459, Length=449, Percent_Identity=23.6080178173719, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17532491, Length=295, Percent_Identity=24.406779661017, Blast_Score=71, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6324990, Length=405, Percent_Identity=29.6296296296296, Blast_Score=175, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6324553, Length=397, Percent_Identity=30.2267002518892, Blast_Score=170, Evalue=5e-43, Organism=Saccharomyces cerevisiae, GI6320772, Length=407, Percent_Identity=29.4840294840295, Blast_Score=170, Evalue=6e-43, Organism=Saccharomyces cerevisiae, GI6322892, Length=340, Percent_Identity=32.6470588235294, Blast_Score=163, Evalue=4e-41, Organism=Saccharomyces cerevisiae, GI6324924, Length=460, Percent_Identity=28.695652173913, Blast_Score=160, Evalue=4e-40, Organism=Saccharomyces cerevisiae, GI6324061, Length=406, Percent_Identity=28.0788177339901, Blast_Score=160, Evalue=6e-40, Organism=Saccharomyces cerevisiae, GI6319543, Length=428, Percent_Identity=27.1028037383178, Blast_Score=150, Evalue=6e-37, Organism=Saccharomyces cerevisiae, GI6321629, Length=408, Percent_Identity=26.7156862745098, Blast_Score=148, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6319824, Length=410, Percent_Identity=27.0731707317073, Blast_Score=147, Evalue=5e-36, Organism=Saccharomyces cerevisiae, GI6321053, Length=430, Percent_Identity=27.6744186046512, Blast_Score=144, Evalue=3e-35, Organism=Saccharomyces cerevisiae, GI6320717, Length=414, Percent_Identity=27.0531400966184, Blast_Score=144, Evalue=3e-35, Organism=Saccharomyces cerevisiae, GI6320251, Length=433, Percent_Identity=27.0207852193995, Blast_Score=141, Evalue=2e-34, Organism=Saccharomyces cerevisiae, GI6319542, Length=431, Percent_Identity=26.9141531322506, Blast_Score=140, Evalue=4e-34, Organism=Saccharomyces cerevisiae, GI6324059, Length=447, Percent_Identity=27.9642058165548, Blast_Score=137, Evalue=4e-33, Organism=Saccharomyces cerevisiae, GI6322967, Length=398, Percent_Identity=26.8844221105528, Blast_Score=127, Evalue=5e-30, Organism=Saccharomyces cerevisiae, GI6319608, Length=436, Percent_Identity=23.6238532110092, Blast_Score=119, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6324981, Length=396, Percent_Identity=28.030303030303, Blast_Score=118, Evalue=3e-27, Organism=Saccharomyces cerevisiae, GI6320364, Length=514, Percent_Identity=24.7081712062257, Blast_Score=94, Evalue=6e-20, Organism=Drosophila melanogaster, GI24667468, Length=370, Percent_Identity=22.972972972973, Blast_Score=84, Evalue=3e-16, Organism=Drosophila melanogaster, GI24666159, Length=430, Percent_Identity=23.4883720930233, Blast_Score=78, Evalue=2e-14, Organism=Drosophila melanogaster, GI221512776, Length=430, Percent_Identity=23.4883720930233, Blast_Score=77, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004841 - InterPro: IPR002293 - InterPro: IPR004840 [H]
Pfam domain/function: PF00324 AA_permease [H]
EC number: NA
Molecular weight: Translated: 51826; Mature: 51826
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: PS00218 AMINO_ACID_PERMEASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTRESNSGATEGTSNQLGHSLETRHLTMMGLGSAIGAGLFLGTGVGIQAAGPAVLLSYV CCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH VAGIVVIAVMQMLGELAAARPASGTFATYGQMAFGRWNGFALGWLYWFMLIMVMGAEITG HHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCC AGAIMGAWFGVEGWIPGLVCVVLFTIVNLAGVRGFGEFEYWFAFIKVAVIIVFLVIGTGL CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LLGLFPNYDSPGLSHFSDFAPNGISGMAVGLLAVAFAFGGIEIVTIAAAESKDPANSIAA HHHHCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHH AVRAVIWRISVFYLGSVFLISALLPFETLGEAESAEESPFTRILALAQIPGIVEIMEAVI HHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHH VLALLSAFNAQIYATSRLMYSFSQERNVPRWFGKTNSQKVPYRAVWCSLFFAFVSVALQV HHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH WGPENLINILFNAVGGTLLVIWMVIVLAQIKLRPTFERDGSLTVRMVGYPVLSWLTFLAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHH IALTVLMLFDNSARLQVLTVTIAFVVLSLIGLVLQKTQGPQQSNENADAASTAGVAGTTA HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCC TNSDPNA CCCCCCC >Mature Secondary Structure MKTRESNSGATEGTSNQLGHSLETRHLTMMGLGSAIGAGLFLGTGVGIQAAGPAVLLSYV CCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH VAGIVVIAVMQMLGELAAARPASGTFATYGQMAFGRWNGFALGWLYWFMLIMVMGAEITG HHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCC AGAIMGAWFGVEGWIPGLVCVVLFTIVNLAGVRGFGEFEYWFAFIKVAVIIVFLVIGTGL CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LLGLFPNYDSPGLSHFSDFAPNGISGMAVGLLAVAFAFGGIEIVTIAAAESKDPANSIAA HHHHCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHH AVRAVIWRISVFYLGSVFLISALLPFETLGEAESAEESPFTRILALAQIPGIVEIMEAVI HHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHH VLALLSAFNAQIYATSRLMYSFSQERNVPRWFGKTNSQKVPYRAVWCSLFFAFVSVALQV HHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH WGPENLINILFNAVGGTLLVIWMVIVLAQIKLRPTFERDGSLTVRMVGYPVLSWLTFLAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHH IALTVLMLFDNSARLQVLTVTIAFVVLSLIGLVLQKTQGPQQSNENADAASTAGVAGTTA HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCC TNSDPNA CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 4-aminobutyrate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 4-aminobutyrate [Periplasm] = Proton [Cytoplasm] + 4-aminobutyrate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7592354; 12948626 [H]