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The map label for this gene is dapD

Identifier: 68536478

GI number: 68536478

Start: 1652757

End: 1653764

Strand: Direct

Name: dapD

Synonym: jk1392

Alternate gene names: NA

Gene position: 1652757-1653764 (Clockwise)

Preceding gene: 68536477

Following gene: 68536486

Centisome position: 67.12

GC content: 63.79

Gene sequence:

>1008_bases
ATGACTTCTGCTTATGGAAATGGATTTGCCACCCTGACCGATTCTGGCGATGTGCTGGACACCTGGTTCTTCGAGTTCGA
CCTGGGTTCAGCTGATACTGGCACCGCCGAAGCGGGTACACAGGTGCTCGATCTTACTGACGCCAGCGCCTCCGCTCCTG
ATTCCTTCCGCCCCTTTGCCAAGCTGGCAGGCGCGGACGATGTCCGCGGCACCCGCCGCGTGGCGGTGACCACTAAGATT
GCCGATCTGGACACCCCTCCCGCCGATGCGTATGACGCCTACCTGCGTCTGCACCTGATCTCCGGCCGGAAGATCAAGCC
CCACGGCTGCAACCTAGATGGCCTATTCGGCCTTCTCAGCAACGTTGTGTGGACCAACCACGGACCGTGTGCCGTCCCCG
GTTTCGAGTCTGTCCGCGCCCGCCTGCAGGCCGAGCGCGGCCCGGTGACGGTCTACAGCGTGGATAAATTCCCGCGCATG
GTGGATTACGTGGTTCCCACTGGCGTGCGTATCGGCGATGCGGACCGCGTGCGCCTGGGCGCCCACCTGGCTGAGGGCAC
AACTGTTATGCACGAGGGCTTCATCAACTTCAACGCGGGCACGCTGGGCTCCTCCATGGTCGAGGGTCGCATCTCTGGTG
GCGTGGTCGTGGGCGACGGCTCCGACATCGGTGGCGGCGCTTCCGTCATGGGCACTCTGTCCGGCGGTGGCAAGGAGGTC
ATCTCCATCGGCGAGCGTTGCCTATTGGGCGCGAACTCCGGCGTGGGCATTTCCCTGGGCGACGACGTCACGGTGGAGGC
CGGCCTGTATATCACTTTCGGCACCAAGGTGACCCTGACCGACGAGGTGGCCAAGCAGTTGGGCAAGCAGGAAGGCGAAT
CCGTCAAGGCCTCCGAACTCTCGGGCGCCAGCGGCATTCTGTTCCGTCGCAACTCCATCTCCGGCGCGGTCGAGGCCGTC
GCAAACGCCTCCGCCATCGAGCTCAACGAGGCACTACACGCCAACTAA

Upstream 100 bases:

>100_bases
AAAATGCTGATGCTGCTAGTACTGCTGGCGTTGCCGGAACCACTGCGACAAACAGCGACCCCAACGCATAGACACCAACA
CAAATGTAGGATCGACAACC

Downstream 100 bases:

>100_bases
GCTCCGCACCCTAGGCCCGTGCACTAACTAGGGTCGTTTGCTCCCCCACTGAGACCAAGGAGCTTCCAGGCAGCGCGCAA
TTACAACGCGCTGCCTGTTT

Product: 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase

Products: CoA; (R)-2-(succinylamino)-6-oxoheptanedioate

Alternate protein names: Transferase; Tetrahydrodipicolinate Succinylase; Tetrahydropicolinate Succinylase; Tetrahydrodipicolinate N- Succinyltransferase; Transferase Hexapeptide Repeat Containing Protein; Succinyltransferase; Succinyl-Transferase; Tranferase; Tetrahydrodipicolinate N-Succinyltransferase-Like Protein; Lysine Biosynthesis-Like Protein; Transferase Tetrahydrodipicolinate N-Succinyltransferase

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MTSAYGNGFATLTDSGDVLDTWFFEFDLGSADTGTAEAGTQVLDLTDASASAPDSFRPFAKLAGADDVRGTRRVAVTTKI
ADLDTPPADAYDAYLRLHLISGRKIKPHGCNLDGLFGLLSNVVWTNHGPCAVPGFESVRARLQAERGPVTVYSVDKFPRM
VDYVVPTGVRIGDADRVRLGAHLAEGTTVMHEGFINFNAGTLGSSMVEGRISGGVVVGDGSDIGGGASVMGTLSGGGKEV
ISIGERCLLGANSGVGISLGDDVTVEAGLYITFGTKVTLTDEVAKQLGKQEGESVKASELSGASGILFRRNSISGAVEAV
ANASAIELNEALHAN

Sequences:

>Translated_335_residues
MTSAYGNGFATLTDSGDVLDTWFFEFDLGSADTGTAEAGTQVLDLTDASASAPDSFRPFAKLAGADDVRGTRRVAVTTKI
ADLDTPPADAYDAYLRLHLISGRKIKPHGCNLDGLFGLLSNVVWTNHGPCAVPGFESVRARLQAERGPVTVYSVDKFPRM
VDYVVPTGVRIGDADRVRLGAHLAEGTTVMHEGFINFNAGTLGSSMVEGRISGGVVVGDGSDIGGGASVMGTLSGGGKEV
ISIGERCLLGANSGVGISLGDDVTVEAGLYITFGTKVTLTDEVAKQLGKQEGESVKASELSGASGILFRRNSISGAVEAV
ANASAIELNEALHAN
>Mature_334_residues
TSAYGNGFATLTDSGDVLDTWFFEFDLGSADTGTAEAGTQVLDLTDASASAPDSFRPFAKLAGADDVRGTRRVAVTTKIA
DLDTPPADAYDAYLRLHLISGRKIKPHGCNLDGLFGLLSNVVWTNHGPCAVPGFESVRARLQAERGPVTVYSVDKFPRMV
DYVVPTGVRIGDADRVRLGAHLAEGTTVMHEGFINFNAGTLGSSMVEGRISGGVVVGDGSDIGGGASVMGTLSGGGKEVI
SIGERCLLGANSGVGISLGDDVTVEAGLYITFGTKVTLTDEVAKQLGKQEGESVKASELSGASGILFRRNSISGAVEAVA
NASAIELNEALHAN

Specific function: Unknown

COG id: COG2171

COG function: function code E; Tetrahydrodipicolinate N-succinyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.3.1.117

Molecular weight: Translated: 34616; Mature: 34485

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSAYGNGFATLTDSGDVLDTWFFEFDLGSADTGTAEAGTQVLDLTDASASAPDSFRPFA
CCCCCCCCEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHH
KLAGADDVRGTRRVAVTTKIADLDTPPADAYDAYLRLHLISGRKIKPHGCNLDGLFGLLS
HHCCCCCCCCCEEEEEEEEEECCCCCCCCHHEEEEEEEEECCCEECCCCCCHHHHHHHHH
NVVWTNHGPCAVPGFESVRARLQAERGPVTVYSVDKFPRMVDYVVPTGVRIGDADRVRLG
HHEECCCCCEECCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCEEECCCCCEEEC
AHLAEGTTVMHEGFINFNAGTLGSSMVEGRISGGVVVGDGSDIGGGASVMGTLSGGGKEV
EECCCCCEEEEECEEEECCCCCCCHHHCCCCCCCEEEECCCCCCCCCEEEEECCCCCHHH
ISIGERCLLGANSGVGISLGDDVTVEAGLYITFGTKVTLTDEVAKQLGKQEGESVKASEL
HHHCCEEEEECCCCCEEECCCCEEEECEEEEEECCEEEEHHHHHHHHHHHCCCCEEHHHC
SGASGILFRRNSISGAVEAVANASAIELNEALHAN
CCCCEEEEECCCCCHHHHHHHCCCCEEECHHHCCC
>Mature Secondary Structure 
TSAYGNGFATLTDSGDVLDTWFFEFDLGSADTGTAEAGTQVLDLTDASASAPDSFRPFA
CCCCCCCEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHH
KLAGADDVRGTRRVAVTTKIADLDTPPADAYDAYLRLHLISGRKIKPHGCNLDGLFGLLS
HHCCCCCCCCCEEEEEEEEEECCCCCCCCHHEEEEEEEEECCCEECCCCCCHHHHHHHHH
NVVWTNHGPCAVPGFESVRARLQAERGPVTVYSVDKFPRMVDYVVPTGVRIGDADRVRLG
HHEECCCCCEECCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCEEECCCCCEEEC
AHLAEGTTVMHEGFINFNAGTLGSSMVEGRISGGVVVGDGSDIGGGASVMGTLSGGGKEV
EECCCCCEEEEECEEEECCCCCCCHHHCCCCCCCEEEECCCCCCCCCEEEEECCCCCHHH
ISIGERCLLGANSGVGISLGDDVTVEAGLYITFGTKVTLTDEVAKQLGKQEGESVKASEL
HHHCCEEEEECCCCCEEECCCCEEEECEEEEEECCEEEEHHHHHHHHHHHCCCCEEHHHC
SGASGILFRRNSISGAVEAVANASAIELNEALHAN
CCCCEEEEECCCCCHHHHHHHCCCCEEECHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinyl-CoA; (R)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate; H2O

Specific reaction: succinyl-CoA + (R)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate + H2O = CoA + (R)-2-(succinylamino)-6-oxoheptanedioate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA