| Definition | Corynebacterium jeikeium K411, complete genome. |
|---|---|
| Accession | NC_007164 |
| Length | 2,462,499 |
Click here to switch to the map view.
The map label for this gene is 68536372
Identifier: 68536372
GI number: 68536372
Start: 1519568
End: 1521199
Strand: Direct
Name: 68536372
Synonym: jk1290
Alternate gene names: NA
Gene position: 1519568-1521199 (Clockwise)
Preceding gene: 68536371
Following gene: 68536385
Centisome position: 61.71
GC content: 64.09
Gene sequence:
>1632_bases GTGTCGAAGACTAAAACCCTCCTCAAACTCCACTGCAAGCTGTGGGCACACGCGTTCGTGGGCAACCTGCAGATGATCAT CGCCTCGGTGGCCGTAACCATCACTGCAGTGATGGGATGCATCGGCCTAGGCTTCAGCAGCTACGGGGTGCTTGTCAACG ATGGAGACCCAGCGATGTTCGTGCTGACGATGGGGCTCGGCAGCGTGCTCTACCTAGCCATGTCGGCCATCTTCCCCAGC GAGGAACGGATGCTGGACCCACGCATGTTCAGCTCCCTGCCGCTGACCGACCGCGACATCCTGCCCGGCATGGTCACGGC GATGTTCATCAACTCGCGGGCGGCGATCTCGCTGGTGAACACCATCATCATGGCCACCCTCGGATACCTCGCGTTCGCGG AGGTAGCCTCCGCGGGCGCGGGCGCCCTGTGGGTGCTGGCGTGTGTACTCCAGCTGGTGATCACCCTGCTGGCAGGCGAA GCGCTGGCCGCCGCGCTCAGCAGTATTGCCACCAAGTTCAGCGAACTGTGGGGCAACGTCGCCGGGTTCGTCGTCACTTT CGGCTTCCTGGCACTGTACCTCTTGCCGCAGTTGCTCACCGACGGAACCGATCCCACCGCGGCCATCAAGACCAGCGCCG ACATCCTGTCTTGGACACCCTTCGCCGCTGCGGCCGGAGCGGCTGCTGACATGGCCAACATCGGAGGCGGTGGCGTCGGC ACCGGCCTCGCCAAGGGCGCGATCTGCCTCGTGGCGATCCTCGCAGTGGCTTACATAATGCGCGTGGCCGTCAAGCACGA CCTCAACAACCCACTGCCGACTCAGCACGCCACCCGCGCGGCGAAGGGCGACAGCCTACTGCTGCCGCGCGTCCCCAGCT CCCCCATTGGCGCCCTCTACTCCCGCGAGATCCGCTACTGGCGCCGCGACAATCGCTTTATGATGAGCCTGATGGTCGTG GTTGTCCTCTGCGGACTTTACCTACTGATGGGAATGCTCGACGCGGCCAACCGCTGGATGCTGTGGTTCGCACTGTTCTT CGTATCCCTTGGTCCACAGCAGGTCGCCGGCAACTCCCTGGGCATGGACGGCCCATCCAACTGGGTGCACATGGTCGCCG GAGTGCGCGGCAAGCAGATCGTCGCCAGCCGCAGCCTCTCCACCGTGACGGTGCTGGTGCCGATTTGGCTGATCGTCTGC ATCGCCGCCGGAGCCATCGACGGCTTTAGCGCCACCTGGCTGCTGGTTAGCCTTTTGACCCTGGGTTGCATCCTCCTCGC CTCCGCGATGGCGAACTTCAGCGCCACCCGCTTCCCCGCTCAAACCACCGCGCCGGGCACCAACTCCTTCAAGCAGCGCA ACGGCGGCAGCAACGCAATAGTCTCCGCGCTGGTGACGATGCTGATTCTGACCGTCTCTTTCCTGCCGGGCGGGCTGCTC GCACTGATCCCGCTGGCTATGGCCGACGGAGCAGGCAACAGCATTGCCGACATTCCCCTGCTCAGCTGGCTGGGCGTGTT GCTGCACTGGGTAATCGTCATCGGTGCCGCCTGGTTCATGAACCGCCGCGCTTCTCGAAGGCTCGACCTCGAGTGGCCGG ACATCGCGCAGAAGGTTCAGCAGTACCTGTAG
Upstream 100 bases:
>100_bases GGTGGCAAGCAGCTGGACACGGAATCCTTCGGCTGGCTACGCGGCGGACCGCAGTCAGCGCACGGCACGCAGGCGCACGG GCCACACGAAGGGCAGGCCG
Downstream 100 bases:
>100_bases CAGCGCGACCGGGGGCGTCCATAAAAGATTAATCCATAAAAGAACGCAAGAAAAAGGCCGGGCAACGACTGCCCGGCCGC ACACGTACTGGGCGTGAAGC
Product: putative ABC transport system, permease protein
Products: NA
Alternate protein names: ABC Transporter Permease; ABC Transporter; ABC-Type Transport System Permease Component
Number of amino acids: Translated: 543; Mature: 542
Protein sequence:
>543_residues MSKTKTLLKLHCKLWAHAFVGNLQMIIASVAVTITAVMGCIGLGFSSYGVLVNDGDPAMFVLTMGLGSVLYLAMSAIFPS EERMLDPRMFSSLPLTDRDILPGMVTAMFINSRAAISLVNTIIMATLGYLAFAEVASAGAGALWVLACVLQLVITLLAGE ALAAALSSIATKFSELWGNVAGFVVTFGFLALYLLPQLLTDGTDPTAAIKTSADILSWTPFAAAAGAAADMANIGGGGVG TGLAKGAICLVAILAVAYIMRVAVKHDLNNPLPTQHATRAAKGDSLLLPRVPSSPIGALYSREIRYWRRDNRFMMSLMVV VVLCGLYLLMGMLDAANRWMLWFALFFVSLGPQQVAGNSLGMDGPSNWVHMVAGVRGKQIVASRSLSTVTVLVPIWLIVC IAAGAIDGFSATWLLVSLLTLGCILLASAMANFSATRFPAQTTAPGTNSFKQRNGGSNAIVSALVTMLILTVSFLPGGLL ALIPLAMADGAGNSIADIPLLSWLGVLLHWVIVIGAAWFMNRRASRRLDLEWPDIAQKVQQYL
Sequences:
>Translated_543_residues MSKTKTLLKLHCKLWAHAFVGNLQMIIASVAVTITAVMGCIGLGFSSYGVLVNDGDPAMFVLTMGLGSVLYLAMSAIFPS EERMLDPRMFSSLPLTDRDILPGMVTAMFINSRAAISLVNTIIMATLGYLAFAEVASAGAGALWVLACVLQLVITLLAGE ALAAALSSIATKFSELWGNVAGFVVTFGFLALYLLPQLLTDGTDPTAAIKTSADILSWTPFAAAAGAAADMANIGGGGVG TGLAKGAICLVAILAVAYIMRVAVKHDLNNPLPTQHATRAAKGDSLLLPRVPSSPIGALYSREIRYWRRDNRFMMSLMVV VVLCGLYLLMGMLDAANRWMLWFALFFVSLGPQQVAGNSLGMDGPSNWVHMVAGVRGKQIVASRSLSTVTVLVPIWLIVC IAAGAIDGFSATWLLVSLLTLGCILLASAMANFSATRFPAQTTAPGTNSFKQRNGGSNAIVSALVTMLILTVSFLPGGLL ALIPLAMADGAGNSIADIPLLSWLGVLLHWVIVIGAAWFMNRRASRRLDLEWPDIAQKVQQYL >Mature_542_residues SKTKTLLKLHCKLWAHAFVGNLQMIIASVAVTITAVMGCIGLGFSSYGVLVNDGDPAMFVLTMGLGSVLYLAMSAIFPSE ERMLDPRMFSSLPLTDRDILPGMVTAMFINSRAAISLVNTIIMATLGYLAFAEVASAGAGALWVLACVLQLVITLLAGEA LAAALSSIATKFSELWGNVAGFVVTFGFLALYLLPQLLTDGTDPTAAIKTSADILSWTPFAAAAGAAADMANIGGGGVGT GLAKGAICLVAILAVAYIMRVAVKHDLNNPLPTQHATRAAKGDSLLLPRVPSSPIGALYSREIRYWRRDNRFMMSLMVVV VLCGLYLLMGMLDAANRWMLWFALFFVSLGPQQVAGNSLGMDGPSNWVHMVAGVRGKQIVASRSLSTVTVLVPIWLIVCI AAGAIDGFSATWLLVSLLTLGCILLASAMANFSATRFPAQTTAPGTNSFKQRNGGSNAIVSALVTMLILTVSFLPGGLLA LIPLAMADGAGNSIADIPLLSWLGVLLHWVIVIGAAWFMNRRASRRLDLEWPDIAQKVQQYL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57483; Mature: 57352
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKTKTLLKLHCKLWAHAFVGNLQMIIASVAVTITAVMGCIGLGFSSYGVLVNDGDPAMF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEE VLTMGLGSVLYLAMSAIFPSEERMLDPRMFSSLPLTDRDILPGMVTAMFINSRAAISLVN HHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHH TIIMATLGYLAFAEVASAGAGALWVLACVLQLVITLLAGEALAAALSSIATKFSELWGNV HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGFVVTFGFLALYLLPQLLTDGTDPTAAIKTSADILSWTPFAAAAGAAADMANIGGGGVG HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHCCCCHHHHHHHHHHHHHCCCCCHH TGLAKGAICLVAILAVAYIMRVAVKHDLNNPLPTQHATRAAKGDSLLLPRVPSSPIGALY HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEECCCCCCCHHHHHH SREIRYWRRDNRFMMSLMVVVVLCGLYLLMGMLDAANRWMLWFALFFVSLGPQQVAGNSL HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCC GMDGPSNWVHMVAGVRGKQIVASRSLSTVTVLVPIWLIVCIAAGAIDGFSATWLLVSLLT CCCCCCHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LGCILLASAMANFSATRFPAQTTAPGTNSFKQRNGGSNAIVSALVTMLILTVSFLPGGLL HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHH ALIPLAMADGAGNSIADIPLLSWLGVLLHWVIVIGAAWFMNRRASRRLDLEWPDIAQKVQ HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH QYL HHC >Mature Secondary Structure SKTKTLLKLHCKLWAHAFVGNLQMIIASVAVTITAVMGCIGLGFSSYGVLVNDGDPAMF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCEEE VLTMGLGSVLYLAMSAIFPSEERMLDPRMFSSLPLTDRDILPGMVTAMFINSRAAISLVN HHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHH TIIMATLGYLAFAEVASAGAGALWVLACVLQLVITLLAGEALAAALSSIATKFSELWGNV HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGFVVTFGFLALYLLPQLLTDGTDPTAAIKTSADILSWTPFAAAAGAAADMANIGGGGVG HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHCCCCHHHHHHHHHHHHHCCCCCHH TGLAKGAICLVAILAVAYIMRVAVKHDLNNPLPTQHATRAAKGDSLLLPRVPSSPIGALY HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEECCCCCCCHHHHHH SREIRYWRRDNRFMMSLMVVVVLCGLYLLMGMLDAANRWMLWFALFFVSLGPQQVAGNSL HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCC GMDGPSNWVHMVAGVRGKQIVASRSLSTVTVLVPIWLIVCIAAGAIDGFSATWLLVSLLT CCCCCCHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LGCILLASAMANFSATRFPAQTTAPGTNSFKQRNGGSNAIVSALVTMLILTVSFLPGGLL HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHH ALIPLAMADGAGNSIADIPLLSWLGVLLHWVIVIGAAWFMNRRASRRLDLEWPDIAQKVQ HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH QYL HHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA