| Definition | Corynebacterium jeikeium K411, complete genome. |
|---|---|
| Accession | NC_007164 |
| Length | 2,462,499 |
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The map label for this gene is yfiL [H]
Identifier: 68536371
GI number: 68536371
Start: 1518673
End: 1519581
Strand: Direct
Name: yfiL [H]
Synonym: jk1289
Alternate gene names: 68536371
Gene position: 1518673-1519581 (Clockwise)
Preceding gene: 68536369
Following gene: 68536372
Centisome position: 61.67
GC content: 64.03
Gene sequence:
>909_bases ATGGCGCGCATGACTTTTCAGCCATATCCCTCACACTCATCCCTCAACGCGGAGGTCGGCGACGCAGCGCTGGTCATCCG CAACCTGGTGAAAACCTTCGCGAACAAAGTCGCGGTGAATAACCTCAACCTGACCGTGCCGAAGGGCAGCTTCTACGGCA TCGTCGGCCCCAACGGGGCGGGCAAGACCACTGCCATCCTCGCAGCAACGGGCATCATTCGGCCCGACAGTGGCAACTCC TGGGTCGCCGGGCACCCCCTGTGGGCCGACCCCGCCGAAGGCACGCAGGTAGAAGAGGAAATTCTGGCGGCCAAGCGCAG CTATGGGCTGCTGGTCGACGGACTCCCCGTGTTCGAACGCCTCAGCGGCAAGGAATATCTGGAATACCTGGGCTACCTGC GGGACATCCCCGGTGAGGAACTGCAGCAGCGCATCGCAGACCTGCTGCAGGCACTCGACCTAGAGGACGCGGGCAAGAAG TACATCGCCGACTACTCCGCGGGCATGAAGAAAAAGATCCTGCTGGCCGGCGCCCTGCTGCACAGCCCGGAGGTTCTGAT CCTGGACGAGCCTTTCGAGGCCGTGGATCCGGTATCCGGCGAGGTGATCCGCACGATCCTACGACGCTACGTGGCAGCCG GCGGCACCGTGATCCTCAGCTCGCACGTGATGGAGCTGGTCGAGGGGCTGTGCGACCATGTGGCAATCATCAACCAGGGC ACCGTCGTTGCCGCCGGTACCACCGAGCAGGTACGCGCAGGCAAGTCCCTATCCGAGCGCTTCGTAGAAGCCGTAGGTGG CAAGCAGCTGGACACGGAATCCTTCGGCTGGCTACGCGGCGGACCGCAGTCAGCGCACGGCACGCAGGCGCACGGGCCAC ACGAAGGGCAGGCCGGTGTCGAAGACTAA
Upstream 100 bases:
>100_bases CAATCACTGCGAGTTTCACTGTATGAACTCCTTTGTCTCACTAGTTGGTCACTTAGAACAATAGCATGTCGCCCAGACAC CGCTCGCGAACCAACATAAA
Downstream 100 bases:
>100_bases AACCCTCCTCAAACTCCACTGCAAGCTGTGGGCACACGCGTTCGTGGGCAACCTGCAGATGATCATCGCCTCGGTGGCCG TAACCATCACTGCAGTGATG
Product: putative ABC transport system, ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MARMTFQPYPSHSSLNAEVGDAALVIRNLVKTFANKVAVNNLNLTVPKGSFYGIVGPNGAGKTTAILAATGIIRPDSGNS WVAGHPLWADPAEGTQVEEEILAAKRSYGLLVDGLPVFERLSGKEYLEYLGYLRDIPGEELQQRIADLLQALDLEDAGKK YIADYSAGMKKKILLAGALLHSPEVLILDEPFEAVDPVSGEVIRTILRRYVAAGGTVILSSHVMELVEGLCDHVAIINQG TVVAAGTTEQVRAGKSLSERFVEAVGGKQLDTESFGWLRGGPQSAHGTQAHGPHEGQAGVED
Sequences:
>Translated_302_residues MARMTFQPYPSHSSLNAEVGDAALVIRNLVKTFANKVAVNNLNLTVPKGSFYGIVGPNGAGKTTAILAATGIIRPDSGNS WVAGHPLWADPAEGTQVEEEILAAKRSYGLLVDGLPVFERLSGKEYLEYLGYLRDIPGEELQQRIADLLQALDLEDAGKK YIADYSAGMKKKILLAGALLHSPEVLILDEPFEAVDPVSGEVIRTILRRYVAAGGTVILSSHVMELVEGLCDHVAIINQG TVVAAGTTEQVRAGKSLSERFVEAVGGKQLDTESFGWLRGGPQSAHGTQAHGPHEGQAGVED >Mature_301_residues ARMTFQPYPSHSSLNAEVGDAALVIRNLVKTFANKVAVNNLNLTVPKGSFYGIVGPNGAGKTTAILAATGIIRPDSGNSW VAGHPLWADPAEGTQVEEEILAAKRSYGLLVDGLPVFERLSGKEYLEYLGYLRDIPGEELQQRIADLLQALDLEDAGKKY IADYSAGMKKKILLAGALLHSPEVLILDEPFEAVDPVSGEVIRTILRRYVAAGGTVILSSHVMELVEGLCDHVAIINQGT VVAAGTTEQVRAGKSLSERFVEAVGGKQLDTESFGWLRGGPQSAHGTQAHGPHEGQAGVED
Specific function: Unknown
COG id: COG1131
COG function: function code V; ABC-type multidrug transport system, ATPase component
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI31657092, Length=237, Percent_Identity=33.7552742616034, Blast_Score=124, Evalue=1e-28, Organism=Homo sapiens, GI150417984, Length=250, Percent_Identity=34, Blast_Score=122, Evalue=5e-28, Organism=Homo sapiens, GI116734710, Length=257, Percent_Identity=32.295719844358, Blast_Score=118, Evalue=5e-27, Organism=Homo sapiens, GI105990541, Length=226, Percent_Identity=32.3008849557522, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI45446740, Length=226, Percent_Identity=28.3185840707965, Blast_Score=108, Evalue=5e-24, Organism=Homo sapiens, GI47078218, Length=226, Percent_Identity=28.3185840707965, Blast_Score=108, Evalue=5e-24, Organism=Homo sapiens, GI27262624, Length=222, Percent_Identity=29.7297297297297, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI27262626, Length=222, Percent_Identity=29.7297297297297, Blast_Score=107, Evalue=1e-23, Organism=Homo sapiens, GI30795238, Length=244, Percent_Identity=29.5081967213115, Blast_Score=105, Evalue=4e-23, Organism=Homo sapiens, GI27881501, Length=223, Percent_Identity=31.390134529148, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI21536376, Length=231, Percent_Identity=29.4372294372294, Blast_Score=102, Evalue=4e-22, Organism=Homo sapiens, GI153792144, Length=248, Percent_Identity=27.4193548387097, Blast_Score=101, Evalue=8e-22, Organism=Homo sapiens, GI27436953, Length=224, Percent_Identity=26.7857142857143, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI6005701, Length=222, Percent_Identity=27.4774774774775, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI27477115, Length=234, Percent_Identity=26.9230769230769, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI21536378, Length=224, Percent_Identity=26.7857142857143, Blast_Score=72, Evalue=8e-13, Organism=Escherichia coli, GI48994943, Length=294, Percent_Identity=28.5714285714286, Blast_Score=132, Evalue=2e-32, Organism=Escherichia coli, GI1786398, Length=252, Percent_Identity=30.5555555555556, Blast_Score=118, Evalue=4e-28, Organism=Escherichia coli, GI87081782, Length=241, Percent_Identity=26.1410788381743, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI1789593, Length=231, Percent_Identity=29.4372294372294, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1786319, Length=243, Percent_Identity=32.0987654320988, Blast_Score=101, Evalue=5e-23, Organism=Escherichia coli, GI87081709, Length=243, Percent_Identity=25.9259259259259, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1788450, Length=219, Percent_Identity=28.7671232876712, Blast_Score=98, Evalue=6e-22, Organism=Escherichia coli, GI1788225, Length=228, Percent_Identity=27.6315789473684, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1789864, Length=239, Percent_Identity=28.0334728033473, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1788897, Length=214, Percent_Identity=30.8411214953271, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1788761, Length=264, Percent_Identity=27.2727272727273, Blast_Score=88, Evalue=5e-19, Organism=Escherichia coli, GI87081791, Length=234, Percent_Identity=26.4957264957265, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1789586, Length=230, Percent_Identity=27.3913043478261, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI48994883, Length=250, Percent_Identity=27.6, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI48995001, Length=247, Percent_Identity=23.4817813765182, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1787759, Length=231, Percent_Identity=26.8398268398268, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1789032, Length=219, Percent_Identity=26.4840182648402, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI1788165, Length=271, Percent_Identity=28.0442804428044, Blast_Score=78, Evalue=8e-16, Organism=Escherichia coli, GI1790190, Length=256, Percent_Identity=25.390625, Blast_Score=77, Evalue=9e-16, Organism=Escherichia coli, GI1789672, Length=252, Percent_Identity=22.6190476190476, Blast_Score=77, Evalue=9e-16, Organism=Escherichia coli, GI1786563, Length=220, Percent_Identity=28.1818181818182, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1787370, Length=222, Percent_Identity=24.7747747747748, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1790544, Length=238, Percent_Identity=23.9495798319328, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1787029, Length=241, Percent_Identity=24.4813278008299, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1789891, Length=215, Percent_Identity=29.3023255813954, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1788472, Length=257, Percent_Identity=25.2918287937743, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1787089, Length=214, Percent_Identity=25.2336448598131, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1787792, Length=275, Percent_Identity=24.3636363636364, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1790739, Length=240, Percent_Identity=24.5833333333333, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1790525, Length=247, Percent_Identity=24.6963562753036, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI1790467, Length=226, Percent_Identity=23.4513274336283, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1787712, Length=242, Percent_Identity=25.6198347107438, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1787105, Length=183, Percent_Identity=27.8688524590164, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI145693107, Length=248, Percent_Identity=26.6129032258064, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1786345, Length=261, Percent_Identity=24.904214559387, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1789873, Length=193, Percent_Identity=22.7979274611399, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1789751, Length=215, Percent_Identity=27.4418604651163, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1787041, Length=221, Percent_Identity=28.0542986425339, Blast_Score=65, Evalue=6e-12, Organism=Escherichia coli, GI87082267, Length=232, Percent_Identity=21.9827586206897, Blast_Score=65, Evalue=7e-12, Organism=Escherichia coli, GI1787500, Length=220, Percent_Identity=25.4545454545455, Blast_Score=64, Evalue=9e-12, Organism=Escherichia coli, GI1786975, Length=205, Percent_Identity=27.8048780487805, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1789991, Length=232, Percent_Identity=26.2931034482759, Blast_Score=63, Evalue=3e-11, Organism=Escherichia coli, GI1786253, Length=217, Percent_Identity=23.5023041474654, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1788644, Length=200, Percent_Identity=26, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1790162, Length=262, Percent_Identity=24.0458015267176, Blast_Score=62, Evalue=5e-11, Organism=Escherichia coli, GI1789962, Length=218, Percent_Identity=24.7706422018349, Blast_Score=62, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17565586, Length=237, Percent_Identity=30.379746835443, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI71983523, Length=237, Percent_Identity=29.1139240506329, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI71983516, Length=237, Percent_Identity=29.1139240506329, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI71983510, Length=237, Percent_Identity=29.1139240506329, Blast_Score=109, Evalue=1e-24, Organism=Caenorhabditis elegans, GI115533608, Length=236, Percent_Identity=29.6610169491525, Blast_Score=108, Evalue=5e-24, Organism=Caenorhabditis elegans, GI17510237, Length=235, Percent_Identity=29.3617021276596, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI71996809, Length=246, Percent_Identity=28.8617886178862, Blast_Score=74, Evalue=8e-14, Organism=Caenorhabditis elegans, GI193211015, Length=256, Percent_Identity=28.90625, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI193211017, Length=256, Percent_Identity=28.90625, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17511077, Length=234, Percent_Identity=27.7777777777778, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI25146777, Length=236, Percent_Identity=27.9661016949153, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17567265, Length=247, Percent_Identity=25.9109311740891, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71992290, Length=273, Percent_Identity=26.7399267399267, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17555318, Length=225, Percent_Identity=24, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24643674, Length=235, Percent_Identity=28.936170212766, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI24666092, Length=236, Percent_Identity=28.8135593220339, Blast_Score=105, Evalue=4e-23, Organism=Drosophila melanogaster, GI281362751, Length=212, Percent_Identity=34.4339622641509, Blast_Score=102, Evalue=3e-22, Organism=Drosophila melanogaster, GI24650853, Length=211, Percent_Identity=34.5971563981043, Blast_Score=102, Evalue=4e-22, Organism=Drosophila melanogaster, GI24650855, Length=211, Percent_Identity=34.5971563981043, Blast_Score=102, Evalue=4e-22, Organism=Drosophila melanogaster, GI28574150, Length=231, Percent_Identity=27.7056277056277, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI116007328, Length=231, Percent_Identity=27.7056277056277, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI221512771, Length=238, Percent_Identity=27.3109243697479, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI28573571, Length=258, Percent_Identity=26.3565891472868, Blast_Score=96, Evalue=3e-20, Organism=Drosophila melanogaster, GI85725262, Length=222, Percent_Identity=31.0810810810811, Blast_Score=96, Evalue=4e-20, Organism=Drosophila melanogaster, GI28573573, Length=258, Percent_Identity=26.3565891472868, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI116007184, Length=265, Percent_Identity=28.6792452830189, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI221500365, Length=265, Percent_Identity=28.6792452830189, Blast_Score=93, Evalue=3e-19, Organism=Drosophila melanogaster, GI24648314, Length=222, Percent_Identity=26.1261261261261, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24582014, Length=241, Percent_Identity=27.8008298755187, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI24582012, Length=241, Percent_Identity=27.8008298755187, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI85726357, Length=227, Percent_Identity=29.9559471365639, Blast_Score=78, Evalue=7e-15, Organism=Drosophila melanogaster, GI28574259, Length=243, Percent_Identity=26.7489711934156, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI281363262, Length=262, Percent_Identity=27.4809160305344, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI24653245, Length=262, Percent_Identity=27.4809160305344, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI28571209, Length=245, Percent_Identity=23.265306122449, Blast_Score=70, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 32178; Mature: 32047
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARMTFQPYPSHSSLNAEVGDAALVIRNLVKTFANKVAVNNLNLTVPKGSFYGIVGPNGA CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEECCCEEEECCCCEEEEECCCCC GKTTAILAATGIIRPDSGNSWVAGHPLWADPAEGTQVEEEILAAKRSYGLLVDGLPVFER CCCEEEEEEECEEECCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCEEECCCHHHHH LSGKEYLEYLGYLRDIPGEELQQRIADLLQALDLEDAGKKYIADYSAGMKKKILLAGALL CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHCCHHHHHHHHCCCHHHHHHHHHHH HSPEVLILDEPFEAVDPVSGEVIRTILRRYVAAGGTVILSSHVMELVEGLCDHVAIINQG CCCCEEEEECCHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEECCC TVVAAGTTEQVRAGKSLSERFVEAVGGKQLDTESFGWLRGGPQSAHGTQAHGPHEGQAGV EEEEECCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ED CC >Mature Secondary Structure ARMTFQPYPSHSSLNAEVGDAALVIRNLVKTFANKVAVNNLNLTVPKGSFYGIVGPNGA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEECCCEEEECCCCEEEEECCCCC GKTTAILAATGIIRPDSGNSWVAGHPLWADPAEGTQVEEEILAAKRSYGLLVDGLPVFER CCCEEEEEEECEEECCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCEEECCCHHHHH LSGKEYLEYLGYLRDIPGEELQQRIADLLQALDLEDAGKKYIADYSAGMKKKILLAGALL CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHCCHHHHHHHHCCCHHHHHHHHHHH HSPEVLILDEPFEAVDPVSGEVIRTILRRYVAAGGTVILSSHVMELVEGLCDHVAIINQG CCCCEEEEECCHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEECCC TVVAAGTTEQVRAGKSLSERFVEAVGGKQLDTESFGWLRGGPQSAHGTQAHGPHEGQAGV EEEEECCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ED CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8973323; 9384377 [H]