| Definition | Corynebacterium jeikeium K411, complete genome. |
|---|---|
| Accession | NC_007164 |
| Length | 2,462,499 |
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The map label for this gene is fkb [C]
Identifier: 68535497
GI number: 68535497
Start: 512568
End: 512927
Strand: Direct
Name: fkb [C]
Synonym: jk0427
Alternate gene names: 68535497
Gene position: 512568-512927 (Clockwise)
Preceding gene: 68535496
Following gene: 68535500
Centisome position: 20.81
GC content: 64.17
Gene sequence:
>360_bases ATGAGCAAACCGCAGATCGACCTCTCGAACGGCCCCGCACCGAAGGACCTGGTGATTGAAGACCTGGTGATCGGTGATGG CGCAGAGGCCGTACCGGGCGGCATGGTGGAGGTGCACTACGTGGGAGTGGACTTCGCGACCGGCGAGGAGTTCGACTCTT CCTGGGATCGCGGCGAGTCCATCGAGTTCCCCCTTTCCGGCCTGATCGAGGGCTGGCAGGAGGGTATCCCGGGCATGCGC GCCGGTGGTCGCCGCAAGCTGACTATTCCCCCGGAGAAGGCGTACGGCCCGGCCGGTATGGGCCACCCCCTGTCTGGCCG TACGCTGGTCTTCATTATTGACCTGATCGCCGTGAACTAA
Upstream 100 bases:
>100_bases CCTCGGTGTGGCTGCGCGAAGCGCATGCCCCCAAGGGGGCTTTTCGCGTTTTGCTAGGGTGGAGCCTCGAGAAGCTATCA GTTTTCGAAGGAGACTTCCC
Downstream 100 bases:
>100_bases AGCGGTTAGGCGCCCTTTAGCGCCTTGGCCCAGCTCATCTTCTTACCGTTGTTCAGAATGGAATTGCGGTAGACGCGGGC CACCAGCAGAATCACCAGAA
Product: FKBP-type peptidyl-prolyl cis-trans isomerase
Products: NA
Alternate protein names: Peptidyl-prolyl cis-trans isomerase; PPIase; Rotamase [H]
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MSKPQIDLSNGPAPKDLVIEDLVIGDGAEAVPGGMVEVHYVGVDFATGEEFDSSWDRGESIEFPLSGLIEGWQEGIPGMR AGGRRKLTIPPEKAYGPAGMGHPLSGRTLVFIIDLIAVN
Sequences:
>Translated_119_residues MSKPQIDLSNGPAPKDLVIEDLVIGDGAEAVPGGMVEVHYVGVDFATGEEFDSSWDRGESIEFPLSGLIEGWQEGIPGMR AGGRRKLTIPPEKAYGPAGMGHPLSGRTLVFIIDLIAVN >Mature_118_residues SKPQIDLSNGPAPKDLVIEDLVIGDGAEAVPGGMVEVHYVGVDFATGEEFDSSWDRGESIEFPLSGLIEGWQEGIPGMRA GGRRKLTIPPEKAYGPAGMGHPLSGRTLVFIIDLIAVN
Specific function: PPIases accelerate the folding of proteins [H]
COG id: COG0545
COG function: function code O; FKBP-type peptidyl-prolyl cis-trans isomerases 1
Gene ontology:
Cell location: Cytoplasm And Periplasmic Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PPIase FKBP-type domain [H]
Homologues:
Organism=Escherichia coli, GI87082390, Length=101, Percent_Identity=44.5544554455446, Blast_Score=66, Evalue=6e-13, Organism=Escherichia coli, GI1789745, Length=103, Percent_Identity=41.747572815534, Blast_Score=64, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6320727, Length=108, Percent_Identity=40.7407407407407, Blast_Score=69, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6324194, Length=108, Percent_Identity=38.8888888888889, Blast_Score=64, Evalue=6e-12, Organism=Drosophila melanogaster, GI281363946, Length=89, Percent_Identity=40.4494382022472, Blast_Score=70, Evalue=3e-13, Organism=Drosophila melanogaster, GI17352457, Length=89, Percent_Identity=40.4494382022472, Blast_Score=70, Evalue=3e-13, Organism=Drosophila melanogaster, GI24647110, Length=118, Percent_Identity=38.9830508474576, Blast_Score=70, Evalue=4e-13,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001179 [H]
Pfam domain/function: PF00254 FKBP_C [H]
EC number: =5.2.1.8 [H]
Molecular weight: Translated: 12616; Mature: 12485
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: PS50059 FKBP_PPIASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKPQIDLSNGPAPKDLVIEDLVIGDGAEAVPGGMVEVHYVGVDFATGEEFDSSWDRGES CCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCC IEFPLSGLIEGWQEGIPGMRAGGRRKLTIPPEKAYGPAGMGHPLSGRTLVFIIDLIAVN CCCCHHHHHHHHHHCCCCCCCCCEEEEECCCHHCCCCCCCCCCCCCCEEEEEEEEEECC >Mature Secondary Structure SKPQIDLSNGPAPKDLVIEDLVIGDGAEAVPGGMVEVHYVGVDFATGEEFDSSWDRGES CCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCC IEFPLSGLIEGWQEGIPGMRAGGRRKLTIPPEKAYGPAGMGHPLSGRTLVFIIDLIAVN CCCCHHHHHHHHHHCCCCCCCCCEEEEECCCHHCCCCCCCCCCCCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7522844; 12948626 [H]