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The map label for this gene is tnp3504j2

Identifier: 68535455

GI number: 68535455

Start: 462491

End: 462775

Strand: Direct

Name: tnp3504j2

Synonym: jk0388

Alternate gene names: NA

Gene position: 462491-462775 (Clockwise)

Preceding gene: 68535454

Following gene: 68535457

Centisome position: 18.78

GC content: 51.93

Gene sequence:

>285_bases
ATGATCCGGTTCATCGATGAATACCGGAATCGTTTCTCTGTCGAGTTCATCTGTAAGACGTTGAAGGATAACCGGGCTGG
TGGGTTCATCACCTCGCGTGGGTATCGCCAGTCCAGGGCCCGTGGATTAAGTGCTCGCTGCCTTCGTGATGCTGTGCTGG
TTGAACGCATTGGTGCTATTCATCGGGATAATTACGGTGTCTACGGTGTACGGAAAATGTGGCATGCTCTTCATCGTGAG
AGAGTGTCCGATTCTTTGTGTGCGGGGGGCTTGGGTTACAAGTAG

Upstream 100 bases:

>100_bases
CGAGGCTTCGCCGTGAAAATCAAGAGCTACGCGACACCAATGAACTTTTAAAGGCTGCCTCAGCTTTTTTCGCGTCGGAA
CTCGACCCACAACGTCGGAA

Downstream 100 bases:

>100_bases
TCCGCGAATCGGTCGGGGTACGCCACAGCTAGTTGGTTGATGGCTTGTTTCCACCCGGTGGCTTTCGCTCCTTCAATATA
GCCGTTGCATTCGATGTCGC

Product: transposase for IS3504j

Products: NA

Alternate protein names: Transposase; Transposase ; Transposase For Insertion Sequence; Transposase Subunit B; Integrase Catalytic Region; Integrase Catalytic Domain-Containing Protein

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MIRFIDEYRNRFSVEFICKTLKDNRAGGFITSRGYRQSRARGLSARCLRDAVLVERIGAIHRDNYGVYGVRKMWHALHRE
RVSDSLCAGGLGYK

Sequences:

>Translated_94_residues
MIRFIDEYRNRFSVEFICKTLKDNRAGGFITSRGYRQSRARGLSARCLRDAVLVERIGAIHRDNYGVYGVRKMWHALHRE
RVSDSLCAGGLGYK
>Mature_94_residues
MIRFIDEYRNRFSVEFICKTLKDNRAGGFITSRGYRQSRARGLSARCLRDAVLVERIGAIHRDNYGVYGVRKMWHALHRE
RVSDSLCAGGLGYK

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10869; Mature: 10869

Theoretical pI: Translated: 10.71; Mature: 10.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRFIDEYRNRFSVEFICKTLKDNRAGGFITSRGYRQSRARGLSARCLRDAVLVERIGAI
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHH
HRDNYGVYGVRKMWHALHRERVSDSLCAGGLGYK
HCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIRFIDEYRNRFSVEFICKTLKDNRAGGFITSRGYRQSRARGLSARCLRDAVLVERIGAI
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHH
HRDNYGVYGVRKMWHALHRERVSDSLCAGGLGYK
HCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA