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The map label for this gene is tnp3504j3 [C]

Identifier: 68535457

GI number: 68535457

Start: 464217

End: 464861

Strand: Direct

Name: tnp3504j3 [C]

Synonym: jk0390

Alternate gene names: 68535457

Gene position: 464217-464861 (Clockwise)

Preceding gene: 68535455

Following gene: 68535459

Centisome position: 18.85

GC content: 54.11

Gene sequence:

>645_bases
ATGCGTCTAGCCGGTGTATCAGGCAAAGGCAAAGGCCGCTCGCCTATGACCACTCGCACACCTCAAAGGCCGGATTTGCG
CCCGGACTTGGTGGAGCGAGAATTCAAAGCCGAAGGCCCGAACAAGCTGTGGGTGGCTGACATTACCTACGTTCGCACGA
AGAAAGGCTTTGTGTACGCCGCATTTGTCACCGATGTTTACTCCCGACGGATCGTTGGGTGGGCGTTATCAGATTCCATG
CGCACCGAAGCGTTGCCACTGCAAGCTCTCAACCAGGCGATCGCGTGTGCTGAAGAAACAACAAGTCTCATTCACCATTC
AGATCACGGCTCGCAGTATGTCAGCGTTGTCTACAACGAGCGTCTTGCCCAGCACGGGATTGCCGCTTCCACCGGAACTG
TCGGGGATTCCTATGACAATGCTCTGGCTGAAAACGTTAACGGCTCCTACAAAAACGAGCTGATCCATACTCGCAGGTGG
AATGACGTTGTCGAGGTAGAAATCGCGACGTTCGAGTGGGTGTCATGGTGGAACGAGACGAGGCTTCACCAAAGCTTGGG
ATACCGAACCCCAGTCGAAGTGGAAACCGAATTTTGGGAGCAGCACCCGCCGCAAGCAATAATAGAAATCAAGGCAAATG
CCTAG

Upstream 100 bases:

>100_bases
ATCAGTGAAACTCCTTCTAGATCAGAGCCTCACACACAAACTTCCTGACACCCTCCATCGTGACGGAATCGATATCGGTC
GTGAACAAACCGCGCGGCTG

Downstream 100 bases:

>100_bases
GAACAAAACCCGGGGCACTTCACCTGGCGATCTTGACCGGATCGTCAGGGACTTCTGTATGTAGATACAGCCACCAATCC
ATCACTGTGCGTTGATGCGG

Product: transposase for IS3504j

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MRLAGVSGKGKGRSPMTTRTPQRPDLRPDLVEREFKAEGPNKLWVADITYVRTKKGFVYAAFVTDVYSRRIVGWALSDSM
RTEALPLQALNQAIACAEETTSLIHHSDHGSQYVSVVYNERLAQHGIAASTGTVGDSYDNALAENVNGSYKNELIHTRRW
NDVVEVEIATFEWVSWWNETRLHQSLGYRTPVEVETEFWEQHPPQAIIEIKANA

Sequences:

>Translated_214_residues
MRLAGVSGKGKGRSPMTTRTPQRPDLRPDLVEREFKAEGPNKLWVADITYVRTKKGFVYAAFVTDVYSRRIVGWALSDSM
RTEALPLQALNQAIACAEETTSLIHHSDHGSQYVSVVYNERLAQHGIAASTGTVGDSYDNALAENVNGSYKNELIHTRRW
NDVVEVEIATFEWVSWWNETRLHQSLGYRTPVEVETEFWEQHPPQAIIEIKANA
>Mature_214_residues
MRLAGVSGKGKGRSPMTTRTPQRPDLRPDLVEREFKAEGPNKLWVADITYVRTKKGFVYAAFVTDVYSRRIVGWALSDSM
RTEALPLQALNQAIACAEETTSLIHHSDHGSQYVSVVYNERLAQHGIAASTGTVGDSYDNALAENVNGSYKNELIHTRRW
NDVVEVEIATFEWVSWWNETRLHQSLGYRTPVEVETEFWEQHPPQAIIEIKANA

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=155, Percent_Identity=49.6774193548387, Blast_Score=149, Evalue=1e-36,
Organism=Escherichia coli, GI1788405, Length=199, Percent_Identity=33.1658291457286, Blast_Score=111, Evalue=4e-26,
Organism=Escherichia coli, GI1787263, Length=199, Percent_Identity=33.1658291457286, Blast_Score=111, Evalue=4e-26,
Organism=Escherichia coli, GI1786753, Length=199, Percent_Identity=33.1658291457286, Blast_Score=111, Evalue=4e-26,
Organism=Escherichia coli, GI1786570, Length=199, Percent_Identity=33.1658291457286, Blast_Score=111, Evalue=4e-26,
Organism=Escherichia coli, GI1786490, Length=199, Percent_Identity=33.1658291457286, Blast_Score=111, Evalue=4e-26,
Organism=Escherichia coli, GI1789981, Length=172, Percent_Identity=27.906976744186, Blast_Score=89, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 24187; Mature: 24187

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLAGVSGKGKGRSPMTTRTPQRPDLRPDLVEREFKAEGPNKLWVADITYVRTKKGFVYA
CEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEEEEECCCEEEE
AFVTDVYSRRIVGWALSDSMRTEALPLQALNQAIACAEETTSLIHHSDHGSQYVSVVYNE
HHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
RLAQHGIAASTGTVGDSYDNALAENVNGSYKNELIHTRRWNDVVEVEIATFEWVSWWNET
HHHHCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEEEEEHHHHHHHHH
RLHQSLGYRTPVEVETEFWEQHPPQAIIEIKANA
HHHHHCCCCCCCCEEHHHHHCCCCCEEEEEEECC
>Mature Secondary Structure
MRLAGVSGKGKGRSPMTTRTPQRPDLRPDLVEREFKAEGPNKLWVADITYVRTKKGFVYA
CEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEEEEECCCEEEE
AFVTDVYSRRIVGWALSDSMRTEALPLQALNQAIACAEETTSLIHHSDHGSQYVSVVYNE
HHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
RLAQHGIAASTGTVGDSYDNALAENVNGSYKNELIHTRRWNDVVEVEIATFEWVSWWNET
HHHHCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEEEEEHHHHHHHHH
RLHQSLGYRTPVEVETEFWEQHPPQAIIEIKANA
HHHHHCCCCCCCCEEHHHHHCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2159625; 2824781 [H]