Click here to switch to the map view.

The map label for this gene is 68535417

Identifier: 68535417

GI number: 68535417

Start: 423923

End: 424657

Strand: Direct

Name: 68535417

Synonym: jk0352

Alternate gene names: NA

Gene position: 423923-424657 (Clockwise)

Preceding gene: 68535416

Following gene: 68535418

Centisome position: 17.22

GC content: 67.48

Gene sequence:

>735_bases
ATGAGCCCCGCACAGACCGTCCCCAGCGCCCAGCGTGCCCCCCGCGTTTTGTTGACCATCACGGGTTTGCGCCAGGACAC
GGTGACCGCGGCCGAGAAAATGCGGGATGCAGCGCGGGCGCTGGACCTGCACGCCGGTTTGGTGCTGACAGTGCAGGGGC
CGAACTGGCGGCTGAAGGATGACCACGCGGCGCTGGAACTGATCCACGATTCTGCTGCCCGCGGCCACGAGCTGCTGCTC
GGCGGGCTGGGACCGCTGGGCGGGGCGCACGGCAAGGGGGAGTTCCACCGGCTCGGCCGCCACGAGGCCACCCTGCGGCT
CTCCGCAGCCACCCGCCAGCTGGATGCTCTCGGGTTGAGCCCGAAGGCCTTCGCTCCGACCCGTTGGCTGGCGTCGGAGG
ACGCGCTGCAGGCTGCCGGCGAGGTGGGTTTCGCAGTCGCGGCGGATGCGTACACCATCCGGGATCTCATCAATGAAAAG
CGCCATCCGGTGCGTGTGCTCGCGTTCGGCGATGGGTTTGGGTCGGTGAAATGGTGGCGTCGCAACGTCCTCAACAGCGC
GCGCCGCAGCGCCGCGAAGGGCAAAGACATCCGCCTTTCCATCAGCGCGGCGAAGGCTGGCAAGGACGACGTGGCGGGCG
ATATGCTGCGCATTCTCGAGTTGCTGCGCGAAGCCGGCTACGAGTCCGCGAACTACTGCGATTACGTGGAACGCCAGCAG
GCATCTGTAGCTTAA

Upstream 100 bases:

>100_bases
AGGGGTCAAGAATAGCGGCTCAGAGCCTTTAACAACTCGACGCCCAGATGTAGGGCGGGCGTTACCTCCCGTTCACCTGT
GTTGTGCAGGCTAAGTATCT

Downstream 100 bases:

>100_bases
GGGGGCGGTCGCCCAGCAGTGTTACGATGGGGCGGTAACCTACCGGGAAATTACCGCAAAGCTGGGAGAATGTAGAAGCC
ATGGCTCGTGTTGTCGTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MSPAQTVPSAQRAPRVLLTITGLRQDTVTAAEKMRDAARALDLHAGLVLTVQGPNWRLKDDHAALELIHDSAARGHELLL
GGLGPLGGAHGKGEFHRLGRHEATLRLSAATRQLDALGLSPKAFAPTRWLASEDALQAAGEVGFAVAADAYTIRDLINEK
RHPVRVLAFGDGFGSVKWWRRNVLNSARRSAAKGKDIRLSISAAKAGKDDVAGDMLRILELLREAGYESANYCDYVERQQ
ASVA

Sequences:

>Translated_244_residues
MSPAQTVPSAQRAPRVLLTITGLRQDTVTAAEKMRDAARALDLHAGLVLTVQGPNWRLKDDHAALELIHDSAARGHELLL
GGLGPLGGAHGKGEFHRLGRHEATLRLSAATRQLDALGLSPKAFAPTRWLASEDALQAAGEVGFAVAADAYTIRDLINEK
RHPVRVLAFGDGFGSVKWWRRNVLNSARRSAAKGKDIRLSISAAKAGKDDVAGDMLRILELLREAGYESANYCDYVERQQ
ASVA
>Mature_243_residues
SPAQTVPSAQRAPRVLLTITGLRQDTVTAAEKMRDAARALDLHAGLVLTVQGPNWRLKDDHAALELIHDSAARGHELLLG
GLGPLGGAHGKGEFHRLGRHEATLRLSAATRQLDALGLSPKAFAPTRWLASEDALQAAGEVGFAVAADAYTIRDLINEKR
HPVRVLAFGDGFGSVKWWRRNVLNSARRSAAKGKDIRLSISAAKAGKDDVAGDMLRILELLREAGYESANYCDYVERQQA
SVA

Specific function: Unknown

COG id: COG3233

COG function: function code R; Predicted deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26312; Mature: 26181

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPAQTVPSAQRAPRVLLTITGLRQDTVTAAEKMRDAARALDLHAGLVLTVQGPNWRLKD
CCCCCCCCCHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEECC
DHAALELIHDSAARGHELLLGGLGPLGGAHGKGEFHRLGRHEATLRLSAATRQLDALGLS
HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHCCCCHHEEEEHHHHHHHHHCCCC
PKAFAPTRWLASEDALQAAGEVGFAVAADAYTIRDLINEKRHPVRVLAFGDGFGSVKWWR
CCCCCCHHHHCCHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHH
RNVLNSARRSAAKGKDIRLSISAAKAGKDDVAGDMLRILELLREAGYESANYCDYVERQQ
HHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
ASVA
HCCC
>Mature Secondary Structure 
SPAQTVPSAQRAPRVLLTITGLRQDTVTAAEKMRDAARALDLHAGLVLTVQGPNWRLKD
CCCCCCCCHHHCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEECC
DHAALELIHDSAARGHELLLGGLGPLGGAHGKGEFHRLGRHEATLRLSAATRQLDALGLS
HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHCCCCHHEEEEHHHHHHHHHCCCC
PKAFAPTRWLASEDALQAAGEVGFAVAADAYTIRDLINEKRHPVRVLAFGDGFGSVKWWR
CCCCCCHHHHCCHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHH
RNVLNSARRSAAKGKDIRLSISAAKAGKDDVAGDMLRILELLREAGYESANYCDYVERQQ
HHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
ASVA
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA