BacMap

Definition	Corynebacterium jeikeium K411, complete genome.
Accession	NC_007164
Length	2,462,499

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The map label for this gene is yhaQ [H]

Identifier: 68535375

GI number: 68535375

Start: 377971

End: 378702

Strand: Direct

Name: yhaQ [H]

Synonym: jk0310

Alternate gene names: 68535375

Gene position: 377971-378702 (Clockwise)

Preceding gene: 68535374

Following gene: 68535376

Centisome position: 15.35

GC content: 55.46

Gene sequence:

>732_bases
TTGTCGAATAGCTACTCATTTTCTTTTAGCTACCCGCGCTCTAATGAAGGAGTCGAGGTCCACTCGCTCGAGGTTCCCAC
TAGCCCAACGGTCATACTGGGTGTCAACGGTGCCGGTAAGACTACGCTTATGAAGTTGCTGGTCGGTCAGCTAAAACCGT
CCAAAGGCGCTGTGCCGAAGTTGGGCCGAGCGGTGTACGTCCCGCAGCATTTCGAAAGCATCAATGGGGCGCGCGTTGTT
GACTATGTTTCCTACGTCGCCTGGCTTAATGGTGCCGGTTGGACGGAGAGCAAGAGGACCGCGGCCTATTGGATTGAATT
CGTAGGTTTGAAGGAACACGCACATAAGCAATGCGGCAAGCTGTCCGGTGGGCAGCAAGCTCGCGTGCAAATAGCTGCAG
CCCTGAACTCTAACGCGGAGCACATACTGCTGGACGAACCCAGCGCCGCACTCGACCCACTGGCGAAGCGGGATCTGCAA
GGGCTCTATCGATCCATTGCGGAAGCGGGCGTTGGCCTTTGGGTTTCTAGTCATCAGCCCTTGGAAGTGGAGAAGCCGTT
CGAGCATGTACTCGTGTTGCATAAAGGAAAAGTTGAGTTCCAGGGGCCGTTGAGCGATTTTTTGCGAGTTGGGCGCGGTT
CGCTAGAGCCGGGGGAGTCACATCGCTATTCCGACACTGTGAGAAACCTTGCGGAAGCATTTTCCAGGACCGGTGGCCAT
GTCGAGGATTAA

Upstream 100 bases:

>100_bases
CGTGTGGCAGGCACAGAATTAGTTATTGACAATCCTTTTATGTCTTCGTAGGTTTGTTCCATCACACAGAATCTCTGCGC
ACTAAAGGTCTGAAACTTCC

Downstream 100 bases:

>100_bases
CGCTCTCAACGTTGCTTTGGTGCTCGCGGCTTCTGTGCTTGGCTTGCTGAGCATTACACTCAACGCAAACCCGGTGCCTA
CGCAGGACAACGCGATCTCC

Product: putative ABC transport system, ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MSNSYSFSFSYPRSNEGVEVHSLEVPTSPTVILGVNGAGKTTLMKLLVGQLKPSKGAVPKLGRAVYVPQHFESINGARVV
DYVSYVAWLNGAGWTESKRTAAYWIEFVGLKEHAHKQCGKLSGGQQARVQIAAALNSNAEHILLDEPSAALDPLAKRDLQ
GLYRSIAEAGVGLWVSSHQPLEVEKPFEHVLVLHKGKVEFQGPLSDFLRVGRGSLEPGESHRYSDTVRNLAEAFSRTGGH
VED

Sequences:

>Translated_243_residues
MSNSYSFSFSYPRSNEGVEVHSLEVPTSPTVILGVNGAGKTTLMKLLVGQLKPSKGAVPKLGRAVYVPQHFESINGARVV
DYVSYVAWLNGAGWTESKRTAAYWIEFVGLKEHAHKQCGKLSGGQQARVQIAAALNSNAEHILLDEPSAALDPLAKRDLQ
GLYRSIAEAGVGLWVSSHQPLEVEKPFEHVLVLHKGKVEFQGPLSDFLRVGRGSLEPGESHRYSDTVRNLAEAFSRTGGH
VED
>Mature_242_residues
SNSYSFSFSYPRSNEGVEVHSLEVPTSPTVILGVNGAGKTTLMKLLVGQLKPSKGAVPKLGRAVYVPQHFESINGARVVD
YVSYVAWLNGAGWTESKRTAAYWIEFVGLKEHAHKQCGKLSGGQQARVQIAAALNSNAEHILLDEPSAALDPLAKRDLQG
LYRSIAEAGVGLWVSSHQPLEVEKPFEHVLVLHKGKVEFQGPLSDFLRVGRGSLEPGESHRYSDTVRNLAEAFSRTGGHV
ED

Specific function: Unknown

COG id: COG1131

COG function: function code V; ABC-type multidrug transport system, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI45446740, Length=218, Percent_Identity=26.605504587156, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI47078218, Length=218, Percent_Identity=26.605504587156, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI105990541, Length=201, Percent_Identity=29.3532338308458, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI31657092, Length=188, Percent_Identity=27.1276595744681, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI150417984, Length=186, Percent_Identity=27.4193548387097, Blast_Score=71, Evalue=9e-13,
Organism=Homo sapiens, GI21536376, Length=184, Percent_Identity=27.1739130434783, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI27881501, Length=185, Percent_Identity=28.1081081081081, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI30795238, Length=185, Percent_Identity=28.1081081081081, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI116734710, Length=197, Percent_Identity=24.3654822335025, Blast_Score=67, Evalue=1e-11,
Organism=Escherichia coli, GI87081782, Length=186, Percent_Identity=32.258064516129, Blast_Score=91, Evalue=9e-20,
Organism=Escherichia coli, GI1790544, Length=206, Percent_Identity=31.5533980582524, Blast_Score=80, Evalue=8e-17,
Organism=Escherichia coli, GI1787029, Length=189, Percent_Identity=31.2169312169312, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1786398, Length=224, Percent_Identity=27.2321428571429, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1789593, Length=208, Percent_Identity=29.3269230769231, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1789032, Length=205, Percent_Identity=27.3170731707317, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1788644, Length=187, Percent_Identity=32.620320855615, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1789672, Length=199, Percent_Identity=25.1256281407035, Blast_Score=71, Evalue=8e-14,
Organism=Escherichia coli, GI1786872, Length=192, Percent_Identity=29.6875, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1786345, Length=198, Percent_Identity=28.2828282828283, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI2367384, Length=213, Percent_Identity=30.5164319248826, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1790525, Length=247, Percent_Identity=25.5060728744939, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1789873, Length=197, Percent_Identity=27.9187817258883, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1787712, Length=180, Percent_Identity=28.3333333333333, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1786563, Length=157, Percent_Identity=31.2101910828025, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI1787105, Length=229, Percent_Identity=27.0742358078603, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI1788761, Length=196, Percent_Identity=27.5510204081633, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1790739, Length=199, Percent_Identity=28.643216080402, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI87081709, Length=210, Percent_Identity=28.0952380952381, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1787758, Length=175, Percent_Identity=29.1428571428571, Blast_Score=62, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI71983516, Length=178, Percent_Identity=32.0224719101124, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI71983523, Length=178, Percent_Identity=32.0224719101124, Blast_Score=77, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI71983510, Length=178, Percent_Identity=32.0224719101124, Blast_Score=77, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17510237, Length=175, Percent_Identity=28.5714285714286, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI115533608, Length=201, Percent_Identity=25.3731343283582, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17565586, Length=214, Percent_Identity=28.5046728971963, Blast_Score=71, Evalue=6e-13,
Organism=Saccharomyces cerevisiae, GI6321121, Length=211, Percent_Identity=28.9099526066351, Blast_Score=72, Evalue=6e-14,
Organism=Drosophila melanogaster, GI24643674, Length=213, Percent_Identity=27.2300469483568, Blast_Score=81, Evalue=7e-16,
Organism=Drosophila melanogaster, GI24666092, Length=229, Percent_Identity=28.3842794759825, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24581191, Length=213, Percent_Identity=28.6384976525822, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24581189, Length=213, Percent_Identity=28.6384976525822, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24581193, Length=213, Percent_Identity=28.6384976525822, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24581195, Length=213, Percent_Identity=28.6384976525822, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24648314, Length=187, Percent_Identity=26.7379679144385, Blast_Score=75, Evalue=5e-14,
Organism=Drosophila melanogaster, GI221512771, Length=186, Percent_Identity=26.8817204301075, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28574150, Length=185, Percent_Identity=28.6486486486486, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI116007328, Length=185, Percent_Identity=28.6486486486486, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24650853, Length=152, Percent_Identity=29.6052631578947, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24650855, Length=152, Percent_Identity=29.6052631578947, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI28574744, Length=221, Percent_Identity=26.2443438914027, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI281362751, Length=152, Percent_Identity=29.6052631578947, Blast_Score=67, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 26445; Mature: 26314

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNSYSFSFSYPRSNEGVEVHSLEVPTSPTVILGVNGAGKTTLMKLLVGQLKPSKGAVPK
CCCCEEEEEECCCCCCCEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCC
LGRAVYVPQHFESINGARVVDYVSYVAWLNGAGWTESKRTAAYWIEFVGLKEHAHKQCGK
CCCEEECCHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHC
LSGGQQARVQIAAALNSNAEHILLDEPSAALDPLAKRDLQGLYRSIAEAGVGLWVSSHQP
CCCCCHHHEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCC
LEVEKPFEHVLVLHKGKVEFQGPLSDFLRVGRGSLEPGESHRYSDTVRNLAEAFSRTGGH
CCCCCCHHHEEEEECCCEEECCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
VED
CCC
>Mature Secondary Structure 
SNSYSFSFSYPRSNEGVEVHSLEVPTSPTVILGVNGAGKTTLMKLLVGQLKPSKGAVPK
CCCEEEEEECCCCCCCEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCC
LGRAVYVPQHFESINGARVVDYVSYVAWLNGAGWTESKRTAAYWIEFVGLKEHAHKQCGK
CCCEEECCHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHC
LSGGQQARVQIAAALNSNAEHILLDEPSAALDPLAKRDLQGLYRSIAEAGVGLWVSSHQP
CCCCCHHHEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCC
LEVEKPFEHVLVLHKGKVEFQGPLSDFLRVGRGSLEPGESHRYSDTVRNLAEAFSRTGGH
CCCCCCHHHEEEEECCCEEECCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
VED
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]