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The map label for this gene is 68535261

Identifier: 68535261

GI number: 68535261

Start: 244912

End: 245685

Strand: Direct

Name: 68535261

Synonym: jk0196

Alternate gene names: NA

Gene position: 244912-245685 (Clockwise)

Preceding gene: 68535260

Following gene: 68535266

Centisome position: 9.95

GC content: 64.73

Gene sequence:

>774_bases
ATGCCCGACGCGTCCCACCCCGAGTCCGCGCCGCGGTTCCCCTTTCCCATCGACCAGCAGCCCGGTAGGTCCCACCACCG
CACCGTCGACCGAATCGCGGACATCCTGGAGTTCGTGGCGCGCAACCCGCAGCCGCGCGGACTCACGGATATTTCCAAGG
CAATCGGCGCGCCAGTAAGTTCCACCCAATCCCTGGTGAATGGCCTGGTCGCAGCCGGATACCTGGAGGAACGGGACAAG
GCCTTCCGCCTGGGGCTGGCCCCGTACCTGCTGAGCACCCTCGCCGGCAGCCGCCCCGTGGATCAGGTCACCCACGAGAT
GCTGGAAGACGTGGTTGAAGAGACAGGCTATATCGCCGTGTTGGCGTCATTGGTAGGCGACAATGTCTACTACCTCGACT
ATGCGCTGTCGGACCCCGAGTTCGAGTACCTGGCGCAAAACCGGCTGCAGCGCCCGCCACTCGAGACGTCAGCGGGATGG
GCGATCCTCTCCGGGCTGGGACACGAGCAAGTGTGGGGGATTCTGGCGGCGTCCGAGAGTTCGCAGGAGACCATCAATAA
GTTCCAGCGCTGGTACCCAGATATGCGCGCGACCGGCGAATGCGTGGCCCCCGGCGTGGCCTTGAACGGTGCGGATGGTG
TGGCCGTGCGTGTCGAGAGCCAGGGGGTGGCGGTAGCCTCGGTGTCCGTCATTGCCTCGACCGAGCAGATCACGCGCGAC
GCGGATCGGATTATTGAGGTTTTAAGACGCCACAGTGCCCGCTGGAACCGTTAG

Upstream 100 bases:

>100_bases
GGATTCCGAAGACTTGGAATTGTGACGTTTAGCTGTGAAACTGTGGTTCTCAGCTATCGATCTGAGCAGTCCTGCCGCCC
CAAGCCGAAAGGAACCCCCA

Downstream 100 bases:

>100_bases
CGGCTTAAGCTGAGTTCGTCGTTGAAGAAGTGGCGGTAATTCGCCAGTCTTCTCCCTGGGGGAGGGCGTGCAGGATGGTT
TCAAAGGCGCTGGAGATTAG

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator IclR Family Protein; Regulatory Proteins IclR

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MPDASHPESAPRFPFPIDQQPGRSHHRTVDRIADILEFVARNPQPRGLTDISKAIGAPVSSTQSLVNGLVAAGYLEERDK
AFRLGLAPYLLSTLAGSRPVDQVTHEMLEDVVEETGYIAVLASLVGDNVYYLDYALSDPEFEYLAQNRLQRPPLETSAGW
AILSGLGHEQVWGILAASESSQETINKFQRWYPDMRATGECVAPGVALNGADGVAVRVESQGVAVASVSVIASTEQITRD
ADRIIEVLRRHSARWNR

Sequences:

>Translated_257_residues
MPDASHPESAPRFPFPIDQQPGRSHHRTVDRIADILEFVARNPQPRGLTDISKAIGAPVSSTQSLVNGLVAAGYLEERDK
AFRLGLAPYLLSTLAGSRPVDQVTHEMLEDVVEETGYIAVLASLVGDNVYYLDYALSDPEFEYLAQNRLQRPPLETSAGW
AILSGLGHEQVWGILAASESSQETINKFQRWYPDMRATGECVAPGVALNGADGVAVRVESQGVAVASVSVIASTEQITRD
ADRIIEVLRRHSARWNR
>Mature_256_residues
PDASHPESAPRFPFPIDQQPGRSHHRTVDRIADILEFVARNPQPRGLTDISKAIGAPVSSTQSLVNGLVAAGYLEERDKA
FRLGLAPYLLSTLAGSRPVDQVTHEMLEDVVEETGYIAVLASLVGDNVYYLDYALSDPEFEYLAQNRLQRPPLETSAGWA
ILSGLGHEQVWGILAASESSQETINKFQRWYPDMRATGECVAPGVALNGADGVAVRVESQGVAVASVSVIASTEQITRDA
DRIIEVLRRHSARWNR

Specific function: Unknown

COG id: COG1414

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28103; Mature: 27972

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDASHPESAPRFPFPIDQQPGRSHHRTVDRIADILEFVARNPQPRGLTDISKAIGAPVS
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCH
STQSLVNGLVAAGYLEERDKAFRLGLAPYLLSTLAGSRPVDQVTHEMLEDVVEETGYIAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHH
LASLVGDNVYYLDYALSDPEFEYLAQNRLQRPPLETSAGWAILSGLGHEQVWGILAASES
HHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHCCCC
SQETINKFQRWYPDMRATGECVAPGVALNGADGVAVRVESQGVAVASVSVIASTEQITRD
CHHHHHHHHHHCCCHHCCCCCCCCCCEECCCCCEEEEEECCCEEEHHHHHHHHHHHHHHH
ADRIIEVLRRHSARWNR
HHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PDASHPESAPRFPFPIDQQPGRSHHRTVDRIADILEFVARNPQPRGLTDISKAIGAPVS
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCH
STQSLVNGLVAAGYLEERDKAFRLGLAPYLLSTLAGSRPVDQVTHEMLEDVVEETGYIAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHH
LASLVGDNVYYLDYALSDPEFEYLAQNRLQRPPLETSAGWAILSGLGHEQVWGILAASES
HHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHCCCC
SQETINKFQRWYPDMRATGECVAPGVALNGADGVAVRVESQGVAVASVSVIASTEQITRD
CHHHHHHHHHHCCCHHCCCCCCCCCCEECCCCCEEEEEECCCEEEHHHHHHHHHHHHHHH
ADRIIEVLRRHSARWNR
HHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA