| Definition | Corynebacterium jeikeium K411, complete genome. |
|---|---|
| Accession | NC_007164 |
| Length | 2,462,499 |
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The map label for this gene is msrA [H]
Identifier: 68535175
GI number: 68535175
Start: 130494
End: 131222
Strand: Direct
Name: msrA [H]
Synonym: jk0110
Alternate gene names: 68535175
Gene position: 130494-131222 (Clockwise)
Preceding gene: 68535174
Following gene: 68535178
Centisome position: 5.3
GC content: 63.37
Gene sequence:
>729_bases ATGACGAACTTCTTCGACCGCATTATGGCACTCAACAGCAAAGGACCGTACCGGGCCGAAAGAGTCGGGCCGGAGGATGC ACTGAAGGGCGGACGGACGCCCGTACTGGAGAATCCGCAGCCGAACGTAGTTCTGGGAACGCCACTGACCGGCCTGGAGG ATAGCTATTGGGCCGAGGCCGATGGGCTAGAGCAACCCGCGCAAATCGTTCTGGGGCTGGGCTGCTTCTGGGGTGTGGAG CGCATGTTCTGGGGCGTGGACGGAGTGTGGGGAACCTCCGTAGGCTACGCCGGTGGCTACACCCCAAACCCCACCTACCG CGAGGTCTGCACCGGGCGGACCGGCCATGCGGAGGTGGTGCGGGTTATCTTTGACGCCGCCGCGGTGAGCCTGGAACAAC TGCTGCAGATCGCCTTTGAGAACCACGATCCTACGCAGGGGGACCGGCAGGGCAACGACGTGGGCACGCAATACCGTTCG TGTGTGTACACGCAGGATGCTGAACAGTTGGGACGCGTGCGGCAGGCCATCGCAGGCTGGCAGCAGCGCTTTAGTGACGC GGGCTTCGGGGAGATCACCACGGAAGTGGCCGAGCTGGCGGACATTGGCGACGGTCAGTACTACCTGGCCGAGGACGAGC ACCAGCAGTATCTACACAAGAACCCCGGCGGGTATTGCAACCACGGTTCAAATGGCGTGAGTTGCCCCGTCGGGGTGCTG GGGGACTAG
Upstream 100 bases:
>100_bases CGCCGACGACTGCGTGGCGACCTCGGCGGTTCGCGCCTGGCTGCGCCGGGGCGCGCCGGGCCTGCGGGAACTGCGGCGTC AATAAAAAAGAGGACAAGAT
Downstream 100 bases:
>100_bases CGAGCCAGCAACTGTGGCTCTACTTGGAGAGGTTCTGGTTCGGAATGCGCCCCTCCGGAACGACCTTGCCGCCGTCCCAG CGGAAGGTGACGTCTGAGTA
Product: methionine sulfoxide reductase A
Products: NA
Alternate protein names: Protein-methionine-S-oxide reductase; Peptide-methionine (S)-S-oxide reductase; Peptide Met(O) reductase [H]
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MTNFFDRIMALNSKGPYRAERVGPEDALKGGRTPVLENPQPNVVLGTPLTGLEDSYWAEADGLEQPAQIVLGLGCFWGVE RMFWGVDGVWGTSVGYAGGYTPNPTYREVCTGRTGHAEVVRVIFDAAAVSLEQLLQIAFENHDPTQGDRQGNDVGTQYRS CVYTQDAEQLGRVRQAIAGWQQRFSDAGFGEITTEVAELADIGDGQYYLAEDEHQQYLHKNPGGYCNHGSNGVSCPVGVL GD
Sequences:
>Translated_242_residues MTNFFDRIMALNSKGPYRAERVGPEDALKGGRTPVLENPQPNVVLGTPLTGLEDSYWAEADGLEQPAQIVLGLGCFWGVE RMFWGVDGVWGTSVGYAGGYTPNPTYREVCTGRTGHAEVVRVIFDAAAVSLEQLLQIAFENHDPTQGDRQGNDVGTQYRS CVYTQDAEQLGRVRQAIAGWQQRFSDAGFGEITTEVAELADIGDGQYYLAEDEHQQYLHKNPGGYCNHGSNGVSCPVGVL GD >Mature_241_residues TNFFDRIMALNSKGPYRAERVGPEDALKGGRTPVLENPQPNVVLGTPLTGLEDSYWAEADGLEQPAQIVLGLGCFWGVER MFWGVDGVWGTSVGYAGGYTPNPTYREVCTGRTGHAEVVRVIFDAAAVSLEQLLQIAFENHDPTQGDRQGNDVGTQYRSC VYTQDAEQLGRVRQAIAGWQQRFSDAGFGEITTEVAELADIGDGQYYLAEDEHQQYLHKNPGGYCNHGSNGVSCPVGVLG D
Specific function: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine [H]
COG id: COG0225
COG function: function code O; Peptide methionine sulfoxide reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the msrA Met sulfoxide reductase family [H]
Homologues:
Organism=Homo sapiens, GI6912516, Length=171, Percent_Identity=57.3099415204678, Blast_Score=206, Evalue=1e-53, Organism=Homo sapiens, GI208609995, Length=171, Percent_Identity=57.3099415204678, Blast_Score=204, Evalue=4e-53, Organism=Homo sapiens, GI208609993, Length=128, Percent_Identity=54.6875, Blast_Score=140, Evalue=8e-34, Organism=Escherichia coli, GI1790665, Length=210, Percent_Identity=47.6190476190476, Blast_Score=187, Evalue=8e-49, Organism=Caenorhabditis elegans, GI17533973, Length=147, Percent_Identity=29.9319727891156, Blast_Score=70, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6320881, Length=180, Percent_Identity=33.8888888888889, Blast_Score=98, Evalue=1e-21, Organism=Drosophila melanogaster, GI24664627, Length=164, Percent_Identity=31.7073170731707, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI45553131, Length=145, Percent_Identity=32.4137931034483, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI24664631, Length=164, Percent_Identity=30.4878048780488, Blast_Score=67, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002569 [H]
Pfam domain/function: PF01625 PMSR [H]
EC number: =1.8.4.11 [H]
Molecular weight: Translated: 26352; Mature: 26221
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNFFDRIMALNSKGPYRAERVGPEDALKGGRTPVLENPQPNVVLGTPLTGLEDSYWAEA CCHHHHHHHHHCCCCCCCHHHCCHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC DGLEQPAQIVLGLGCFWGVERMFWGVDGVWGTSVGYAGGYTPNPTYREVCTGRTGHAEVV CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHH RVIFDAAAVSLEQLLQIAFENHDPTQGDRQGNDVGTQYRSCVYTQDAEQLGRVRQAIAGW HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH QQRFSDAGFGEITTEVAELADIGDGQYYLAEDEHQQYLHKNPGGYCNHGSNGVSCPVGVL HHHHCCCCCHHHHHHHHHHHHCCCCCEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC GD CC >Mature Secondary Structure TNFFDRIMALNSKGPYRAERVGPEDALKGGRTPVLENPQPNVVLGTPLTGLEDSYWAEA CHHHHHHHHHCCCCCCCHHHCCHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC DGLEQPAQIVLGLGCFWGVERMFWGVDGVWGTSVGYAGGYTPNPTYREVCTGRTGHAEVV CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHH RVIFDAAAVSLEQLLQIAFENHDPTQGDRQGNDVGTQYRSCVYTQDAEQLGRVRQAIAGW HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH QQRFSDAGFGEITTEVAELADIGDGQYYLAEDEHQQYLHKNPGGYCNHGSNGVSCPVGVL HHHHCCCCCHHHHHHHHHHHHCCCCCEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC GD CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12840036 [H]