| Definition | Corynebacterium jeikeium K411, complete genome. |
|---|---|
| Accession | NC_007164 |
| Length | 2,462,499 |
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The map label for this gene is gluP [H]
Identifier: 68535096
GI number: 68535096
Start: 39677
End: 40402
Strand: Direct
Name: gluP [H]
Synonym: jk0034
Alternate gene names: 68535096
Gene position: 39677-40402 (Clockwise)
Preceding gene: 68535095
Following gene: 68535098
Centisome position: 1.61
GC content: 60.61
Gene sequence:
>726_bases TTGCCGTGGCTGGACACGCAAGCCCGCCGGAATAGCCGGCGGTATTCCGTCACCAACGTATTCATCGCAGCCTGCTGCCT TGTGTACGTGGTGACGGTTTTTCAATCCGGCAGCATTGCCAACCCCCTCGGCGGCCAATCCATGTTCGGCCTCAGCTCGA ACAACCTGGGGCGGGAGATGCTCTTCAACGCCGCCAACGTCACCCTATTCGGTGAATGGTGGCGCATCCTCACCGCCGCA TTCGTTCATTTGGACCCCGCCCACCTGGGCTTCAACATGTTGCTGATCTTCCTGATCGGCCGCGATGTCGAACGCTTTTA CGGGCCAGTAGTGATGCTCAGCCTCATCGTCGCCAGTGCCGCTGGCGGTGCGCTGGCCTGCATGTACTTCCAGCCGAATG TGCCCGTTGGCGGTGCCTCCACCGTTGGCTACGGGCTATTCGCCATGCTCATTTCTCTGTCGCGGATACGGCAGCGTGAT CTCCGCGGGCCCATCATCCTGCTGCTGGTGAACCTTGGGTACTCCCTCATGTACTCCAATGTTTCGCTATGGGGACACAT AGGTGGGCTCGCCGGAGGAGCCGTCATCGCATTCATCACCAGTACCGTTGGCGAGCAAGGCAATGGGGGCGTGGGGGCGT CAATAAGCAAAAAGACCGCCGCTGCACTAGCCGCGACGGTCATCCTGGCCTTCACCATATGGACCGGCCTGGGGTGGCAC TACTAG
Upstream 100 bases:
>100_bases AAGGTCGTCGCGAAGATCTCTCGCGTCGCAACCGACCGCATGGACCGCCCGAACGACGACGTCGTTATCGAGTCTGTCGA GATCCAGGAGTAAAAACTCC
Downstream 100 bases:
>100_bases AGCAGTGCCGGGAAGTGACGTGGGTGCTACTTCCACCCCATGGTCATCAGCAGACCCACGATCAGAAGGGCGAAGCCAAT CAGGTAGTTCCATGCGTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: Intramembrane serine protease [H]
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MPWLDTQARRNSRRYSVTNVFIAACCLVYVVTVFQSGSIANPLGGQSMFGLSSNNLGREMLFNAANVTLFGEWWRILTAA FVHLDPAHLGFNMLLIFLIGRDVERFYGPVVMLSLIVASAAGGALACMYFQPNVPVGGASTVGYGLFAMLISLSRIRQRD LRGPIILLLVNLGYSLMYSNVSLWGHIGGLAGGAVIAFITSTVGEQGNGGVGASISKKTAAALAATVILAFTIWTGLGWH Y
Sequences:
>Translated_241_residues MPWLDTQARRNSRRYSVTNVFIAACCLVYVVTVFQSGSIANPLGGQSMFGLSSNNLGREMLFNAANVTLFGEWWRILTAA FVHLDPAHLGFNMLLIFLIGRDVERFYGPVVMLSLIVASAAGGALACMYFQPNVPVGGASTVGYGLFAMLISLSRIRQRD LRGPIILLLVNLGYSLMYSNVSLWGHIGGLAGGAVIAFITSTVGEQGNGGVGASISKKTAAALAATVILAFTIWTGLGWH Y >Mature_240_residues PWLDTQARRNSRRYSVTNVFIAACCLVYVVTVFQSGSIANPLGGQSMFGLSSNNLGREMLFNAANVTLFGEWWRILTAAF VHLDPAHLGFNMLLIFLIGRDVERFYGPVVMLSLIVASAAGGALACMYFQPNVPVGGASTVGYGLFAMLISLSRIRQRDL RGPIILLLVNLGYSLMYSNVSLWGHIGGLAGGAVIAFITSTVGEQGNGGVGASISKKTAAALAATVILAFTIWTGLGWHY
Specific function: Rhomboid-type serine protease that catalyzes intramembrane proteolysis. Important for normal cell division and sporulation. May act as a glucose exporter [H]
COG id: COG0705
COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002610 - InterPro: IPR022764 - InterPro: IPR001440 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF01694 Rhomboid; PF00515 TPR_1 [H]
EC number: =3.4.21.105 [H]
Molecular weight: Translated: 25757; Mature: 25626
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPWLDTQARRNSRRYSVTNVFIAACCLVYVVTVFQSGSIANPLGGQSMFGLSSNNLGREM CCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCHHH LFNAANVTLFGEWWRILTAAFVHLDPAHLGFNMLLIFLIGRDVERFYGPVVMLSLIVASA HHHHCCEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC AGGALACMYFQPNVPVGGASTVGYGLFAMLISLSRIRQRDLRGPIILLLVNLGYSLMYSN CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHCC VSLWGHIGGLAGGAVIAFITSTVGEQGNGGVGASISKKTAAALAATVILAFTIWTGLGWH HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC Y C >Mature Secondary Structure PWLDTQARRNSRRYSVTNVFIAACCLVYVVTVFQSGSIANPLGGQSMFGLSSNNLGREM CCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCHHH LFNAANVTLFGEWWRILTAAFVHLDPAHLGFNMLLIFLIGRDVERFYGPVVMLSLIVASA HHHHCCEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC AGGALACMYFQPNVPVGGASTVGYGLFAMLISLSRIRQRDLRGPIILLLVNLGYSLMYSN CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHCC VSLWGHIGGLAGGAVIAFITSTVGEQGNGGVGASISKKTAAALAATVILAFTIWTGLGWH HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC Y C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]