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The map label for this gene is 77761161

Identifier: 77761161

GI number: 77761161

Start: 2017854

End: 2018510

Strand: Reverse

Name: 77761161

Synonym: XC_1679

Alternate gene names: NA

Gene position: 2018510-2017854 (Counterclockwise)

Preceding gene: 66768004

Following gene: 77761160

Centisome position: 39.2

GC content: 67.58

Gene sequence:

>657_bases
ATGGAGACAGACACGCACGTAGGTGATGTGATCGTCCCCGGAGGCTTCCCCGCCCCGGTCACGGGCAGCGCTGTCGCCGC
ATCCCCGCCGTTGCCCACCGTGCGCCTGCTCTCCCTGGACGCGCATGGCCGTGTGCTGGACTGGATCAACTGGCAAGACG
CCGCCTGCCTGTATGCACGCGATGCGGTGTCGTGGACGCTGGGCGAGCCCTGCATGCAGATCCACGGCGGCGTCTCGCGC
CTCACCGGCGAGCGCAGCGTGCTGGAGCTGCATCCAATCATTGCGGCACGCGGCCACGCCCGTTCGCGCGCGCTCGACCC
CACGCCCACCCTCACCAACACCGCCCTGTTCGCACGCGACTCGCAGTTGTGCATGTATTGCGGCCAGCACTTCAGCCGCC
CGCACCTCACCCGCGACCACGTGATGCCGGTATCCAAGGGCGGCCGCGACAGCTGGGAAAACGTGGTGACCGCGTGCTTC
CAGTGCAACTCGCGCAAGGCCAACCGTACACCGCAGCAGGCGCACATGCCGCTGCTGGCCGTGCCCTACCGGCCGAGCTG
GATCGAGCATCTGATCCTGTCCAACCGCAACATCCTGTCCGACCAGATGGCGTTCTTGCGGGCGCAACTGCCCAAGCGCT
CCAAGCTCTCGCTCTAG

Upstream 100 bases:

>100_bases
GACTTCACAGCACACACCGCCGCCGCCCGCACAGTCGAACAACCGCCGAGATCCCGCAGATACACAAACTGTCAACGATC
GGGTATAAGCTGTTTTCCCG

Downstream 100 bases:

>100_bases
ACCGCGCTCGCGCTTGCCCGCATGCGACTGCGACAGTTCGTCGCAGGCATGCGGCGCAGCCACGCCACGCGTGCATCACG
GCTGCTGCAGCCATCACTTC

Product: hypothetical protein

Products: NA

Alternate protein names: HNH Endonuclease Family Protein; Restriction Endonuclease; HNH Endonuclease Domain-Containing Protein; HNH Endonuclease Domain Protein; Endonuclease; Hnh Endonuclease; HNH Nuclease; McrA/HNH Family Nuclease; 5-Methylcytosine-Specific Restriction A; Nuclease; Restriction Endonuclease McrA/HNH Family; Hnh Endonuclease Domain Protein

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
METDTHVGDVIVPGGFPAPVTGSAVAASPPLPTVRLLSLDAHGRVLDWINWQDAACLYARDAVSWTLGEPCMQIHGGVSR
LTGERSVLELHPIIAARGHARSRALDPTPTLTNTALFARDSQLCMYCGQHFSRPHLTRDHVMPVSKGGRDSWENVVTACF
QCNSRKANRTPQQAHMPLLAVPYRPSWIEHLILSNRNILSDQMAFLRAQLPKRSKLSL

Sequences:

>Translated_218_residues
METDTHVGDVIVPGGFPAPVTGSAVAASPPLPTVRLLSLDAHGRVLDWINWQDAACLYARDAVSWTLGEPCMQIHGGVSR
LTGERSVLELHPIIAARGHARSRALDPTPTLTNTALFARDSQLCMYCGQHFSRPHLTRDHVMPVSKGGRDSWENVVTACF
QCNSRKANRTPQQAHMPLLAVPYRPSWIEHLILSNRNILSDQMAFLRAQLPKRSKLSL
>Mature_218_residues
METDTHVGDVIVPGGFPAPVTGSAVAASPPLPTVRLLSLDAHGRVLDWINWQDAACLYARDAVSWTLGEPCMQIHGGVSR
LTGERSVLELHPIIAARGHARSRALDPTPTLTNTALFARDSQLCMYCGQHFSRPHLTRDHVMPVSKGGRDSWENVVTACF
QCNSRKANRTPQQAHMPLLAVPYRPSWIEHLILSNRNILSDQMAFLRAQLPKRSKLSL

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24057; Mature: 24057

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METDTHVGDVIVPGGFPAPVTGSAVAASPPLPTVRLLSLDAHGRVLDWINWQDAACLYAR
CCCCCCCCCEEECCCCCCCCCCCCEECCCCCCEEEEEEECCCCCEEECCCCCCCEEEEEC
DAVSWTLGEPCMQIHGGVSRLTGERSVLELHPIIAARGHARSRALDPTPTLTNTALFARD
CCCEECCCCHHHHHHCCHHHHCCCCCCEEHHHHHHHCCCCCCCCCCCCCCCCCCEEEECC
SQLCMYCGQHFSRPHLTRDHVMPVSKGGRDSWENVVTACFQCNSRKANRTPQQAHMPLLA
CHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCEEE
VPYRPSWIEHLILSNRNILSDQMAFLRAQLPKRSKLSL
ECCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
METDTHVGDVIVPGGFPAPVTGSAVAASPPLPTVRLLSLDAHGRVLDWINWQDAACLYAR
CCCCCCCCCEEECCCCCCCCCCCCEECCCCCCEEEEEEECCCCCEEECCCCCCCEEEEEC
DAVSWTLGEPCMQIHGGVSRLTGERSVLELHPIIAARGHARSRALDPTPTLTNTALFARD
CCCEECCCCHHHHHHCCHHHHCCCCCCEEHHHHHHHCCCCCCCCCCCCCCCCCCEEEECC
SQLCMYCGQHFSRPHLTRDHVMPVSKGGRDSWENVVTACFQCNSRKANRTPQQAHMPLLA
CHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCEEE
VPYRPSWIEHLILSNRNILSDQMAFLRAQLPKRSKLSL
ECCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA