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The map label for this gene is mmgC [H]

Identifier: 66768004

GI number: 66768004

Start: 2019371

End: 2021164

Strand: Reverse

Name: mmgC [H]

Synonym: XC_1680

Alternate gene names: 66768004

Gene position: 2021164-2019371 (Counterclockwise)

Preceding gene: 66768005

Following gene: 77761161

Centisome position: 39.26

GC content: 67.22

Gene sequence:

>1794_bases
ATGAGCAGCTACATCGCACCGTTGACCGACTTCCGCTTTGGCCTGTACGACGTGCTCGGCGCCGAGGCGCTGTTCGCCCG
GCTCGGCTATACCGACGCCAGTGCCGACATCGTCGACGCCGTGCTGGAAGAAGCCGGCCGCTTCACCGCCCAGGTCCTGG
CCCCGCTCAACAGCATCGGCGACGAGATCGGCTGCGCCTTCGACAAGAGCACCCATGCGGTGACCACCCCGCCCGGCTTC
CGCGCGGCCTACGACCAGTTTGTCGAAGGCGGTTGGAACGGGCTTACCGCCGAGCCGCAATTCGGCGGCCAGGGCATGCC
GCACACGCTGGGCGTGCCGCTGAGCGAGATGATCAATGCCGCCAATCTGGCCTGGGGCAACTTCCCGCTGCTCTCGCATG
GCGCAATGGAAGCGCTGCGCCAGCACGGCGAAGCGTGGCAGCAGGAGGTGTTCCTCAAGCCGCTGATCGATGGCCGCTGG
ACCGGCACCATGTGCCTGACCGAGCCGCACTGCGGCACCGACCTGGGCCTGCTCAAGACCCGCGCCGAGCCCAACGCCGA
CGGCAGCTACGCCATCACCGGCACCAAGATCTTCATCACCGCCGGCGAGCACGACCTCACCGACAACATCGTGCATCTGG
TGCTGGCCAAGCTGCCGGACGCACCGGCCGGCGCCAAGGGCATTTCGCTGTTCGTCACGCCCAAGTTCAAGGTGGACCGC
GATGGCACCGTGGGCGAGCGCAACGCGCTGCACTGCGGCTCGATCGAACACAAGATGGGCATCAAGGGCTCGGTGACCTG
CGTGATGAATTTCGAGGGCGCGCAGGGCTATCTGGTCGGCCTGCCGCACAAGGGCCTGCAGGCCATGTTTACGATGATGA
ATACCGCGCGCCTGAGCGTGGGGTTGCAGGGCATTGGCCTTTCCGAGCGCGCGTATCAAAACGCATTGCGCTACACCCGC
GAGCGGCTGCAATCGCGCGCAATCAGCGGCGCCAAATTCCCCGACAAGCCGGCCGACCCGATCATCGTCCACCCGGACGT
GCGCCGCATGCTGCTGACCATCAAGGCGCTGACCGAAGGCAGCCGCCTGCTGGCGCTGCACGCTGCCAGCCTGGTCGATG
TGGCGCACCGCGGCGGCAGCGAGCAGGAGCGCGCCGATGCCGAGACGCTGGTGAGCTTCCTCACCCCCATTTCCAAGGCC
TGCCAGACCGAGTGGTCGGTGGAAAACACCTATCACGCGCTGCAGTGCTTCGGCGGCCACGGCTACATCCGCGAATACGG
CATGGAGCAGCTGGCCCGCGACGCCCGCATCACCACCATCTACGAAGGCACCACCGGCATCCAGGCGCTGGACCTGATCG
GCCGCAAGACCGCCAGCAGCCAGGCCGCCGGGCTCAAGCTGTTCCTGGCCGATGTGGAAACCTTTGCCAACACGCATGCC
GACAACGCGGCCCTGGCCGAGTTCATCAAGCCCTTGCGCGACAAGGCCAGCGAGTGGGCGATGCTGACCCGCGACGTGCT
CGACCGCGCCGCCCGCAACCCGGACGAACTGGGCGCGGCCAGCTACGACTACCTGTTCTATTCGGGCTACGTGGTGCTGG
CCTATTGGTGGGCACGCAGCGTGGCGGCCGCCGACGCCTCCGCGCACGGCGAGGAGTTCAAGCGCGCCAAGCGCGAGACC
GCGCGCTTCTACTTCGCCCGGATCCTGCCGCGTACCCTCACCCACGCGGCCACCATCCGCAGCGGCGCCGCCCCGTTGAT
GACGCTGGAAGCGGAGTTGTTTTGGCAGGGGTGA

Upstream 100 bases:

>100_bases
TTCACGGTTGATTCGCGCAACACGCTCAGCCCGGCCCCGGGCCTCAACGGCGTGCTGCGCTGACGCGCACGCCTCCACGC
ACACGCTTCAAGGATCCCGC

Downstream 100 bases:

>100_bases
GCAGCCGTGTCGCTGCGATGTTGCCCTGCGTGACCGATGTGCCTTGAGAGTGGGGCTTGTCGGGTGTCGATGCGGGCGTC
GCTGTCATGTCGTGTCGTGT

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 597; Mature: 596

Protein sequence:

>597_residues
MSSYIAPLTDFRFGLYDVLGAEALFARLGYTDASADIVDAVLEEAGRFTAQVLAPLNSIGDEIGCAFDKSTHAVTTPPGF
RAAYDQFVEGGWNGLTAEPQFGGQGMPHTLGVPLSEMINAANLAWGNFPLLSHGAMEALRQHGEAWQQEVFLKPLIDGRW
TGTMCLTEPHCGTDLGLLKTRAEPNADGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPAGAKGISLFVTPKFKVDR
DGTVGERNALHCGSIEHKMGIKGSVTCVMNFEGAQGYLVGLPHKGLQAMFTMMNTARLSVGLQGIGLSERAYQNALRYTR
ERLQSRAISGAKFPDKPADPIIVHPDVRRMLLTIKALTEGSRLLALHAASLVDVAHRGGSEQERADAETLVSFLTPISKA
CQTEWSVENTYHALQCFGGHGYIREYGMEQLARDARITTIYEGTTGIQALDLIGRKTASSQAAGLKLFLADVETFANTHA
DNAALAEFIKPLRDKASEWAMLTRDVLDRAARNPDELGAASYDYLFYSGYVVLAYWWARSVAAADASAHGEEFKRAKRET
ARFYFARILPRTLTHAATIRSGAAPLMTLEAELFWQG

Sequences:

>Translated_597_residues
MSSYIAPLTDFRFGLYDVLGAEALFARLGYTDASADIVDAVLEEAGRFTAQVLAPLNSIGDEIGCAFDKSTHAVTTPPGF
RAAYDQFVEGGWNGLTAEPQFGGQGMPHTLGVPLSEMINAANLAWGNFPLLSHGAMEALRQHGEAWQQEVFLKPLIDGRW
TGTMCLTEPHCGTDLGLLKTRAEPNADGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPAGAKGISLFVTPKFKVDR
DGTVGERNALHCGSIEHKMGIKGSVTCVMNFEGAQGYLVGLPHKGLQAMFTMMNTARLSVGLQGIGLSERAYQNALRYTR
ERLQSRAISGAKFPDKPADPIIVHPDVRRMLLTIKALTEGSRLLALHAASLVDVAHRGGSEQERADAETLVSFLTPISKA
CQTEWSVENTYHALQCFGGHGYIREYGMEQLARDARITTIYEGTTGIQALDLIGRKTASSQAAGLKLFLADVETFANTHA
DNAALAEFIKPLRDKASEWAMLTRDVLDRAARNPDELGAASYDYLFYSGYVVLAYWWARSVAAADASAHGEEFKRAKRET
ARFYFARILPRTLTHAATIRSGAAPLMTLEAELFWQG
>Mature_596_residues
SSYIAPLTDFRFGLYDVLGAEALFARLGYTDASADIVDAVLEEAGRFTAQVLAPLNSIGDEIGCAFDKSTHAVTTPPGFR
AAYDQFVEGGWNGLTAEPQFGGQGMPHTLGVPLSEMINAANLAWGNFPLLSHGAMEALRQHGEAWQQEVFLKPLIDGRWT
GTMCLTEPHCGTDLGLLKTRAEPNADGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPAGAKGISLFVTPKFKVDRD
GTVGERNALHCGSIEHKMGIKGSVTCVMNFEGAQGYLVGLPHKGLQAMFTMMNTARLSVGLQGIGLSERAYQNALRYTRE
RLQSRAISGAKFPDKPADPIIVHPDVRRMLLTIKALTEGSRLLALHAASLVDVAHRGGSEQERADAETLVSFLTPISKAC
QTEWSVENTYHALQCFGGHGYIREYGMEQLARDARITTIYEGTTGIQALDLIGRKTASSQAAGLKLFLADVETFANTHAD
NAALAEFIKPLRDKASEWAMLTRDVLDRAARNPDELGAASYDYLFYSGYVVLAYWWARSVAAADASAHGEEFKRAKRETA
RFYFARILPRTLTHAATIRSGAAPLMTLEAELFWQG

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=430, Percent_Identity=27.4418604651163, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI226958412, Length=386, Percent_Identity=26.9430051813472, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI226958414, Length=386, Percent_Identity=26.4248704663212, Blast_Score=99, Evalue=9e-21,
Organism=Homo sapiens, GI4557233, Length=329, Percent_Identity=27.6595744680851, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI21361497, Length=367, Percent_Identity=27.2479564032698, Blast_Score=90, Evalue=6e-18,
Organism=Homo sapiens, GI4557235, Length=419, Percent_Identity=25.0596658711217, Blast_Score=89, Evalue=2e-17,
Organism=Homo sapiens, GI76496475, Length=419, Percent_Identity=25.0596658711217, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI4501857, Length=381, Percent_Identity=25.7217847769029, Blast_Score=86, Evalue=9e-17,
Organism=Homo sapiens, GI7656849, Length=369, Percent_Identity=25.2032520325203, Blast_Score=80, Evalue=5e-15,
Organism=Escherichia coli, GI87082384, Length=338, Percent_Identity=27.5147928994083, Blast_Score=108, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17569725, Length=314, Percent_Identity=28.9808917197452, Blast_Score=100, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI86563383, Length=370, Percent_Identity=27.2972972972973, Blast_Score=99, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI71985184, Length=402, Percent_Identity=26.1194029850746, Blast_Score=99, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI86563381, Length=370, Percent_Identity=27.2972972972973, Blast_Score=99, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI17534899, Length=316, Percent_Identity=28.7974683544304, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17508101, Length=408, Percent_Identity=26.2254901960784, Blast_Score=97, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17570075, Length=310, Percent_Identity=27.4193548387097, Blast_Score=92, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17538396, Length=388, Percent_Identity=25.5154639175258, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17506239, Length=313, Percent_Identity=26.517571884984, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17533517, Length=370, Percent_Identity=24.5945945945946, Blast_Score=82, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI71985192, Length=279, Percent_Identity=27.5985663082437, Blast_Score=79, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17551932, Length=351, Percent_Identity=25.3561253561254, Blast_Score=73, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI71990804, Length=287, Percent_Identity=25.0871080139373, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI21356377, Length=319, Percent_Identity=26.9592476489028, Blast_Score=97, Evalue=4e-20,
Organism=Drosophila melanogaster, GI24666513, Length=365, Percent_Identity=26.027397260274, Blast_Score=96, Evalue=5e-20,
Organism=Drosophila melanogaster, GI24660351, Length=350, Percent_Identity=28.8571428571429, Blast_Score=96, Evalue=9e-20,
Organism=Drosophila melanogaster, GI24646207, Length=365, Percent_Identity=25.4794520547945, Blast_Score=93, Evalue=7e-19,
Organism=Drosophila melanogaster, GI21355753, Length=379, Percent_Identity=25.8575197889182, Blast_Score=87, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 64892; Mature: 64761

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSYIAPLTDFRFGLYDVLGAEALFARLGYTDASADIVDAVLEEAGRFTAQVLAPLNSIG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DEIGCAFDKSTHAVTTPPGFRAAYDQFVEGGWNGLTAEPQFGGQGMPHTLGVPLSEMINA
HHHCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
ANLAWGNFPLLSHGAMEALRQHGEAWQQEVFLKPLIDGRWTGTMCLTEPHCGTDLGLLKT
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHEE
RAEPNADGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPAGAKGISLFVTPKFKVDR
CCCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEECC
DGTVGERNALHCGSIEHKMGIKGSVTCVMNFEGAQGYLVGLPHKGLQAMFTMMNTARLSV
CCCCCCCCCEECCCCHHCCCCCCEEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHH
GLQGIGLSERAYQNALRYTRERLQSRAISGAKFPDKPADPIIVHPDVRRMLLTIKALTEG
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCC
SRLLALHAASLVDVAHRGGSEQERADAETLVSFLTPISKACQTEWSVENTYHALQCFGGH
CEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHEEHEEECCC
GYIREYGMEQLARDARITTIYEGTTGIQALDLIGRKTASSQAAGLKLFLADVETFANTHA
CHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHCCC
DNAALAEFIKPLRDKASEWAMLTRDVLDRAARNPDELGAASYDYLFYSGYVVLAYWWARS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHCCHHHHHHHHHHH
VAAADASAHGEEFKRAKRETARFYFARILPRTLTHAATIRSGAAPLMTLEAELFWQG
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECC
>Mature Secondary Structure 
SSYIAPLTDFRFGLYDVLGAEALFARLGYTDASADIVDAVLEEAGRFTAQVLAPLNSIG
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DEIGCAFDKSTHAVTTPPGFRAAYDQFVEGGWNGLTAEPQFGGQGMPHTLGVPLSEMINA
HHHCCCCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
ANLAWGNFPLLSHGAMEALRQHGEAWQQEVFLKPLIDGRWTGTMCLTEPHCGTDLGLLKT
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHEE
RAEPNADGSYAITGTKIFITAGEHDLTDNIVHLVLAKLPDAPAGAKGISLFVTPKFKVDR
CCCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEECC
DGTVGERNALHCGSIEHKMGIKGSVTCVMNFEGAQGYLVGLPHKGLQAMFTMMNTARLSV
CCCCCCCCCEECCCCHHCCCCCCEEEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHH
GLQGIGLSERAYQNALRYTRERLQSRAISGAKFPDKPADPIIVHPDVRRMLLTIKALTEG
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECHHHHHHHHHHHHHCCC
SRLLALHAASLVDVAHRGGSEQERADAETLVSFLTPISKACQTEWSVENTYHALQCFGGH
CEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHEEHEEECCC
GYIREYGMEQLARDARITTIYEGTTGIQALDLIGRKTASSQAAGLKLFLADVETFANTHA
CHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHCCC
DNAALAEFIKPLRDKASEWAMLTRDVLDRAARNPDELGAASYDYLFYSGYVVLAYWWARS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHCCHHHHHHHHHHH
VAAADASAHGEEFKRAKRETARFYFARILPRTLTHAATIRSGAAPLMTLEAELFWQG
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]