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The map label for this gene is 77761153

Identifier: 77761153

GI number: 77761153

Start: 1872460

End: 1873677

Strand: Direct

Name: 77761153

Synonym: XC_1556

Alternate gene names: NA

Gene position: 1872460-1873677 (Clockwise)

Preceding gene: 66767878

Following gene: 66767883

Centisome position: 36.37

GC content: 67.16

Gene sequence:

>1218_bases
GTGCCAGCGCGGCAACGGGTGGCCTACCTGGCGCAGCTGACCATGAACGATGTGGCGTTTACCGATGCCCTGCGCAGCGG
ACGCCTGTTCGACGACGATGCGCAACGACGCGACTGGTACGCGTTGCGTGCGCCCTACGATGCGCGGCTGTCCAAGGTGT
TCACCTTGCGCCACATCCAGCGCAGTTCGGAATGGTCGCCGCAGCGCATGCTGTCGGCCACCTTCCTGCACGGCGACCTG
GACCATCTGCTGGGCAACATGGTGTTCCTGCTGGCGCTGGGCACGTTGCTGGAAGGGGCGATCGGCAGTGGCTGGTTCCT
GCTGCTATACCTGCTCGGCGGGTTTGGGGCGAGCGCGGTGAGCCTGTGGTGGCGGTGGGGTCAGCCCGGTGGCGGGCTGG
GCGCCTCTGGCGCAATCGCGGCGCTGATGGGCGCGTTCTGCGTGGTCTGGGGCCGCCGGCGGGTGCGCTTTTTCTACTGG
TTTTTCGTGGTGTTCAACTATGTGCGGGGTCCGGCGATTCTGCTGCTGCCGCTGTGGTTGGGCTGGGAGCTCTACAACCT
GCTCTGGCGCGATAATCAAGGCATTGGCTTCGATGCGCATGCCGGTGGGCTGGTGAGTGGCGCGCTGCTCGGTGTGCTGC
TGGTGCTGGTGCGGCAGACCCGCCCGGCTTTCATGGAGGACGACGCGGTGGCGCAGGCGGACGACCGCTGGGAGCGTGCA
CAGCGGCATCTGGGGCGCATGGAAAATGCCGAGGCCGAGCGCCTGCTGGCAGAGCTGGCAAGCGAGCAGCCACGCAGCGC
GGAGATTGCCTTGGCGCGCTATCGGGTGGCCCGTAACGCGGGCCGTCGCAAGGAACTTCAGCAGCACGCGGACACGCTGC
TGCGGCTGCACGCGCACAGCGCCGAACAGACGCGCCTGCAGCTGGCGGTGGCGGCCGAATTAGCCAAGGACCACCTCGAC
TGCGATCCATCGGCACGGATGGCGTTGATCGGCAATTGCCTGCGCACCGGCCTGCTGGCCGACGCGGAACGGCTGTTGAA
AGACAGTGCGCTGAGCACTCCGCGCGCGGAGCTTGCCCAGCAGTGGTTCGTGCTGGCGCTGCGGCATGGCGAGTTGCAGG
CGGGTGAGCAGCGCACGCGCGTGCTGCGTCAGTTACTGGAGCAATTCCCCGAGCAGGGCCAGGCCAATAAGGCGCGGTTC
CTGCTGGACAATGGGTGA

Upstream 100 bases:

>100_bases
GGAGTCCGGCCTGGGCGCGCTGGAGGGCAAGGCGCACGCGCGCTACCTGGCACAGAGCGATGCGAAGGTGCGTGCGGCGC
GCCAGGCGCAATGGGACAAG

Downstream 100 bases:

>100_bases
GAGCGGCTGCGGAAAAGGCCACGCAGCCGCCACTTACGCCGGTTGAATCGCGACCGCTTTCAATGCCGCTGCCAGCTTGG
CGTGCTGGGCTTCATCGTCG

Product: integral membrane protein

Products: NA

Alternate protein names: Integral Membrane Protein

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MPARQRVAYLAQLTMNDVAFTDALRSGRLFDDDAQRRDWYALRAPYDARLSKVFTLRHIQRSSEWSPQRMLSATFLHGDL
DHLLGNMVFLLALGTLLEGAIGSGWFLLLYLLGGFGASAVSLWWRWGQPGGGLGASGAIAALMGAFCVVWGRRRVRFFYW
FFVVFNYVRGPAILLLPLWLGWELYNLLWRDNQGIGFDAHAGGLVSGALLGVLLVLVRQTRPAFMEDDAVAQADDRWERA
QRHLGRMENAEAERLLAELASEQPRSAEIALARYRVARNAGRRKELQQHADTLLRLHAHSAEQTRLQLAVAAELAKDHLD
CDPSARMALIGNCLRTGLLADAERLLKDSALSTPRAELAQQWFVLALRHGELQAGEQRTRVLRQLLEQFPEQGQANKARF
LLDNG

Sequences:

>Translated_405_residues
MPARQRVAYLAQLTMNDVAFTDALRSGRLFDDDAQRRDWYALRAPYDARLSKVFTLRHIQRSSEWSPQRMLSATFLHGDL
DHLLGNMVFLLALGTLLEGAIGSGWFLLLYLLGGFGASAVSLWWRWGQPGGGLGASGAIAALMGAFCVVWGRRRVRFFYW
FFVVFNYVRGPAILLLPLWLGWELYNLLWRDNQGIGFDAHAGGLVSGALLGVLLVLVRQTRPAFMEDDAVAQADDRWERA
QRHLGRMENAEAERLLAELASEQPRSAEIALARYRVARNAGRRKELQQHADTLLRLHAHSAEQTRLQLAVAAELAKDHLD
CDPSARMALIGNCLRTGLLADAERLLKDSALSTPRAELAQQWFVLALRHGELQAGEQRTRVLRQLLEQFPEQGQANKARF
LLDNG
>Mature_404_residues
PARQRVAYLAQLTMNDVAFTDALRSGRLFDDDAQRRDWYALRAPYDARLSKVFTLRHIQRSSEWSPQRMLSATFLHGDLD
HLLGNMVFLLALGTLLEGAIGSGWFLLLYLLGGFGASAVSLWWRWGQPGGGLGASGAIAALMGAFCVVWGRRRVRFFYWF
FVVFNYVRGPAILLLPLWLGWELYNLLWRDNQGIGFDAHAGGLVSGALLGVLLVLVRQTRPAFMEDDAVAQADDRWERAQ
RHLGRMENAEAERLLAELASEQPRSAEIALARYRVARNAGRRKELQQHADTLLRLHAHSAEQTRLQLAVAAELAKDHLDC
DPSARMALIGNCLRTGLLADAERLLKDSALSTPRAELAQQWFVLALRHGELQAGEQRTRVLRQLLEQFPEQGQANKARFL
LDNG

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45507; Mature: 45376

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCC
>Mature Secondary Structure 
PARQRVAYLAQLTMNDVAFTDALRSGRLFDDDAQRRDWYALRAPYDARLSKVFTLRHIQ
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCEEECCCHHHHHHHHHHHHHHH
RSSEWSPQRMLSATFLHGDLDHLLGNMVFLLALGTLLEGAIGSGWFLLLYLLGGFGASAV
HCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHH
SLWWRWGQPGGGLGASGAIAALMGAFCVVWGRRRVRFFYWFFVVFNYVRGPAILLLPLWL
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
GWELYNLLWRDNQGIGFDAHAGGLVSGALLGVLLVLVRQTRPAFMEDDAVAQADDRWERA
HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
QRHLGRMENAEAERLLAELASEQPRSAEIALARYRVARNAGRRKELQQHADTLLRLHAHS
HHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
AEQTRLQLAVAAELAKDHLDCDPSARMALIGNCLRTGLLADAERLLKDSALSTPRAELAQ
CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
QWFVLALRHGELQAGEQRTRVLRQLLEQFPEQGQANKARFLLDNG
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA