| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is zwf [H]
Identifier: 66768298
GI number: 66768298
Start: 2389694
End: 2391124
Strand: Reverse
Name: zwf [H]
Synonym: XC_1977
Alternate gene names: 66768298
Gene position: 2391124-2389694 (Counterclockwise)
Preceding gene: 66768300
Following gene: 66768297
Centisome position: 46.44
GC content: 67.65
Gene sequence:
>1431_bases ATGCACAACACCCTGATCCTGTTCGGCGCCACCGGCGATCTCGCCCAGCGCTATCTCTTTCCATCCCTGCTGCGCCTGTT TGTCGACGGCCTGTTGCCGGAGGACTTCCGCATCCGTGCGTTGGCCCTGTCGCAGCACGACACCGACGCCTTCCGCGAGG TACTGCGCCCGCGCCTGGCCCAGGCGCTGCCGATTGCCACCGCCGCGCAGATCGATGCGCTGCTGCAGCGCATCGACTAC CGCTCGGCGGACCTGCGCAATGCCGAATCGGTGGCCGAGGCCGTGCGCGAACTGGCCAGCCGCCAGTGCGTAAGCTATCT GGCGATTCCACCGGGCCTGTACATCAGTACCTGCCAGGGCCTGGCCCTGGGCGGCGCGCTGGCTGCACCGCACCGGTTGA TGCTGGAAAAACCGATCGGCCACGATTCGGACAGCGCCCGCGAGATCCTGCAGTCGATCGGCGCACTGATCGACGAAGAC CGCGTGTTCCGTCTCGACCACTACCTGGGCAAGGCCGCGGTGCAGAACCTGGTGGCGCTGCGCTTCGGCAACACCTTGCT GGAAGCGGTGTGGAACCGGACCTACATCGAATCGGTACAGATCCTGGTGGCCGAGAGCGAAGGCGTGGACGGCCGCGATG CCTACTACGCCCGCTCCGGCGCGCTGCGCGACATGGTGCAGAGCCATATCCTGCAGTTGCTGTGCCTGGTGGCCATGGAG CCGCCGGCCTCGCTGGAAGCCGACCGCATCCGCGACGAGAAGGTCAAGGTGCTGCGCGCCTTGCGCCCGATGACCGCCGA GCACGCCGCGCAAGACAGCGTGCGTGGCCGCTACACCGCCGGCAGCATCAACGGCGAGCCGGCGCAGGCCTACCACCCGC CGGAAGGCAGCGATGTGGAAACCTTCGTCGCGGTCACCGCGCACATCGACAACTGGCGCTGGGCTGGCGTGCCGTTCCAC CTGTGCACCGGCAAGCGCCTGGCTGAGCGCTCCACGCGCATCGTGGTCACGCTCAAGCCGGTGACGCATTGGTTGTTCGA GCGTCCGGACCGCCAGAACGCGGTGCCCAACCGCCTGACCTTCCAGCTGCAGCCGCTGGAAAACATCGAGCTGGGCCTGA TGAGCAGCCTGGCCGGCCCGGAATGGGGTGCGATCGAACTGCAGCCGCTGGAACTGGAGCTGTCCGTGCCCACCGGCCTG CACCGCCGTATCGCGTATGAACGCTTGTTCGTGGATGCCTTCAACGGCAACCCGGCGCTGTTCGTGCGCGATGACGAGGT CAAGGCCGCCTGGGCCTGGATCGACAGCGTCAGCGATGCCTGGTCGGACGCACAGCTGCCGCTGCAGCCGTATCCGGCCG GTAGCTGGGGCCCCGAGACCGCCGCACCGTTCCTGCCCCCGGCCACCGACGCACAGGGAAACAACGCATGA
Upstream 100 bases:
>100_bases CGCAAGTGTCGCCAGGAACAGACGTACCGACCGCCGGCATCACCGGCGCCTTCCCGCCAAGCCGCTGATAACGATGTCTC CAGAATCTGAAACTCGGTCC
Downstream 100 bases:
>100_bases CTGCTCCTTCCAAGCCGGTGCTGGTTGCCGACATCGGTGGCACCAACGCGCGCTTCGCGCTGGCCGACATCGATGCCTCG GTACCGCTGCTGGACGACAC
Product: glucose-6-phosphate 1-dehydrogenase
Products: NA
Alternate protein names: G6PD [H]
Number of amino acids: Translated: 476; Mature: 476
Protein sequence:
>476_residues MHNTLILFGATGDLAQRYLFPSLLRLFVDGLLPEDFRIRALALSQHDTDAFREVLRPRLAQALPIATAAQIDALLQRIDY RSADLRNAESVAEAVRELASRQCVSYLAIPPGLYISTCQGLALGGALAAPHRLMLEKPIGHDSDSAREILQSIGALIDED RVFRLDHYLGKAAVQNLVALRFGNTLLEAVWNRTYIESVQILVAESEGVDGRDAYYARSGALRDMVQSHILQLLCLVAME PPASLEADRIRDEKVKVLRALRPMTAEHAAQDSVRGRYTAGSINGEPAQAYHPPEGSDVETFVAVTAHIDNWRWAGVPFH LCTGKRLAERSTRIVVTLKPVTHWLFERPDRQNAVPNRLTFQLQPLENIELGLMSSLAGPEWGAIELQPLELELSVPTGL HRRIAYERLFVDAFNGNPALFVRDDEVKAAWAWIDSVSDAWSDAQLPLQPYPAGSWGPETAAPFLPPATDAQGNNA
Sequences:
>Translated_476_residues MHNTLILFGATGDLAQRYLFPSLLRLFVDGLLPEDFRIRALALSQHDTDAFREVLRPRLAQALPIATAAQIDALLQRIDY RSADLRNAESVAEAVRELASRQCVSYLAIPPGLYISTCQGLALGGALAAPHRLMLEKPIGHDSDSAREILQSIGALIDED RVFRLDHYLGKAAVQNLVALRFGNTLLEAVWNRTYIESVQILVAESEGVDGRDAYYARSGALRDMVQSHILQLLCLVAME PPASLEADRIRDEKVKVLRALRPMTAEHAAQDSVRGRYTAGSINGEPAQAYHPPEGSDVETFVAVTAHIDNWRWAGVPFH LCTGKRLAERSTRIVVTLKPVTHWLFERPDRQNAVPNRLTFQLQPLENIELGLMSSLAGPEWGAIELQPLELELSVPTGL HRRIAYERLFVDAFNGNPALFVRDDEVKAAWAWIDSVSDAWSDAQLPLQPYPAGSWGPETAAPFLPPATDAQGNNA >Mature_476_residues MHNTLILFGATGDLAQRYLFPSLLRLFVDGLLPEDFRIRALALSQHDTDAFREVLRPRLAQALPIATAAQIDALLQRIDY RSADLRNAESVAEAVRELASRQCVSYLAIPPGLYISTCQGLALGGALAAPHRLMLEKPIGHDSDSAREILQSIGALIDED RVFRLDHYLGKAAVQNLVALRFGNTLLEAVWNRTYIESVQILVAESEGVDGRDAYYARSGALRDMVQSHILQLLCLVAME PPASLEADRIRDEKVKVLRALRPMTAEHAAQDSVRGRYTAGSINGEPAQAYHPPEGSDVETFVAVTAHIDNWRWAGVPFH LCTGKRLAERSTRIVVTLKPVTHWLFERPDRQNAVPNRLTFQLQPLENIELGLMSSLAGPEWGAIELQPLELELSVPTGL HRRIAYERLFVDAFNGNPALFVRDDEVKAAWAWIDSVSDAWSDAQLPLQPYPAGSWGPETAAPFLPPATDAQGNNA
Specific function: Pentose phosphate pathway; first step. [C]
COG id: COG0364
COG function: function code G; Glucose-6-phosphate 1-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucose-6-phosphate dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI109389365, Length=476, Percent_Identity=33.8235294117647, Blast_Score=246, Evalue=4e-65, Organism=Homo sapiens, GI108773793, Length=476, Percent_Identity=33.8235294117647, Blast_Score=246, Evalue=5e-65, Organism=Homo sapiens, GI52145310, Length=472, Percent_Identity=28.6016949152542, Blast_Score=167, Evalue=3e-41, Organism=Escherichia coli, GI1788158, Length=464, Percent_Identity=40.301724137931, Blast_Score=348, Evalue=3e-97, Organism=Caenorhabditis elegans, GI17538218, Length=477, Percent_Identity=33.5429769392034, Blast_Score=251, Evalue=7e-67, Organism=Saccharomyces cerevisiae, GI6324088, Length=485, Percent_Identity=32.1649484536082, Blast_Score=235, Evalue=1e-62, Organism=Drosophila melanogaster, GI24643350, Length=478, Percent_Identity=33.0543933054393, Blast_Score=237, Evalue=1e-62, Organism=Drosophila melanogaster, GI24643352, Length=478, Percent_Identity=33.0543933054393, Blast_Score=237, Evalue=2e-62, Organism=Drosophila melanogaster, GI221513548, Length=477, Percent_Identity=27.4633123689727, Blast_Score=155, Evalue=7e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001282 - InterPro: IPR019796 - InterPro: IPR022675 - InterPro: IPR022674 - InterPro: IPR016040 [H]
Pfam domain/function: PF02781 G6PD_C; PF00479 G6PD_N [H]
EC number: =1.1.1.49 [H]
Molecular weight: Translated: 52619; Mature: 52619
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHNTLILFGATGDLAQRYLFPSLLRLFVDGLLPEDFRIRALALSQHDTDAFREVLRPRLA CCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHH QALPIATAAQIDALLQRIDYRSADLRNAESVAEAVRELASRQCVSYLAIPPGLYISTCQG HHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCC LALGGALAAPHRLMLEKPIGHDSDSAREILQSIGALIDEDRVFRLDHYLGKAAVQNLVAL HHHCCHHHCCCHHHEECCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHH RFGNTLLEAVWNRTYIESVQILVAESEGVDGRDAYYARSGALRDMVQSHILQLLCLVAME HHHHHHHHHHHCHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC PPASLEADRIRDEKVKVLRALRPMTAEHAAQDSVRGRYTAGSINGEPAQAYHPPEGSDVE CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCE TFVAVTAHIDNWRWAGVPFHLCTGKRLAERSTRIVVTLKPVTHWLFERPDRQNAVPNRLT EEEEEEEEECCCEECCCCEEECCCCHHHCCCCEEEEEECHHHHHHHCCCCCCCCCCCCEE FQLQPLENIELGLMSSLAGPEWGAIELQPLELELSVPTGLHRRIAYERLFVDAFNGNPAL EEECCCCCCHHHHHHHCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHEEEEECCCEEE FVRDDEVKAAWAWIDSVSDAWSDAQLPLQPYPAGSWGPETAAPFLPPATDAQGNNA EEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MHNTLILFGATGDLAQRYLFPSLLRLFVDGLLPEDFRIRALALSQHDTDAFREVLRPRLA CCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHH QALPIATAAQIDALLQRIDYRSADLRNAESVAEAVRELASRQCVSYLAIPPGLYISTCQG HHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCC LALGGALAAPHRLMLEKPIGHDSDSAREILQSIGALIDEDRVFRLDHYLGKAAVQNLVAL HHHCCHHHCCCHHHEECCCCCCCHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHH RFGNTLLEAVWNRTYIESVQILVAESEGVDGRDAYYARSGALRDMVQSHILQLLCLVAME HHHHHHHHHHHCHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC PPASLEADRIRDEKVKVLRALRPMTAEHAAQDSVRGRYTAGSINGEPAQAYHPPEGSDVE CCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCE TFVAVTAHIDNWRWAGVPFHLCTGKRLAERSTRIVVTLKPVTHWLFERPDRQNAVPNRLT EEEEEEEEECCCEECCCCEEECCCCHHHCCCCEEEEEECHHHHHHHCCCCCCCCCCCCEE FQLQPLENIELGLMSSLAGPEWGAIELQPLELELSVPTGLHRRIAYERLFVDAFNGNPAL EEECCCCCCHHHHHHHCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHEEEEECCCEEE FVRDDEVKAAWAWIDSVSDAWSDAQLPLQPYPAGSWGPETAAPFLPPATDAQGNNA EEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2254282 [H]