| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is pgl [H]
Identifier: 66768296
GI number: 66768296
Start: 2387974
End: 2388693
Strand: Reverse
Name: pgl [H]
Synonym: XC_1975
Alternate gene names: 66768296
Gene position: 2388693-2387974 (Counterclockwise)
Preceding gene: 66768297
Following gene: 66768295
Centisome position: 46.39
GC content: 68.47
Gene sequence:
>720_bases ATGAGTTTGCAGGACAACGACCGCATCAGCCTGGTGCGCTACGACGACCTCGACGAATGGACCGAAGCGGTGGCCAGCGA AATGGCCGACCTGCTGGAACAGGAAATCTCGCGCCGCGGCCAGGCGCGCATGCTGCTGTCCGGCGGCACCACCCCGGCGC CGGTGTACGAATCGCTGGCGCATCGCCCGCTGGATTGGTCGCGGGTCGAGGTGGGCCTGGTGGATGAGCGCTGGCTCTCT CCACAGGACCAGGACAGCAATGCCTGGCTGGTCAAGCAGAGCTTCCTGGACCATGCACCGGCGGCCACCTTCATTCCGTT GGTGCGCCCGGGCAAGCAGTTGCCCGAGTGCGTGCATACCGCCAACCTGCAGGCCACGCATGCCGAACCGGCCTGCCTGG CGGTGATGGGCATGGGCGGCGACGGGCATACCGCCTCGCTATTCCCCGGCTCGACCGATCTACCCAAGGCCCTGGCCAGC CCGCAGCCGTACGCGTCGCTGGACGCCACCGGCTGCCCCGGTGCCAACCAGTGGCCGCTGCGCATCACCTTGACCCCGGC CGGGCTGGCGCCAATTCCCACGCGCCTGCTGTTGCTGCGCGGCAAGCAGAAGCTCGATGTGCTGCAGGCGGCGCTGGCAG GCGAGGACATCAGCGAATACCCGATCCGGGTCGCGCTGCAGCAGCCTGGCCCGCGCCTGCGGGTGCATTGGTGCAGTTAG
Upstream 100 bases:
>100_bases CGCGGGTGCCCTCGCTGGCGGTGATGCATCCGCATGCCGGCCTCCTGGGTGCAGCGGCGTATGCGGTGGACGCCGAACGC GCATTGCCGGGAGAGCAGCG
Downstream 100 bases:
>100_bases TGGATGTCGGGACCTCGGGTGGGTGGCTTGGTCATGCTGATGGCGTGCAAGCACTTGCCCACGTTGTGATACCGCGGCAG CCCGCATCGCCTGATGCCGG
Product: 6-phosphogluconolactonase
Products: NA
Alternate protein names: 6PGL [H]
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MSLQDNDRISLVRYDDLDEWTEAVASEMADLLEQEISRRGQARMLLSGGTTPAPVYESLAHRPLDWSRVEVGLVDERWLS PQDQDSNAWLVKQSFLDHAPAATFIPLVRPGKQLPECVHTANLQATHAEPACLAVMGMGGDGHTASLFPGSTDLPKALAS PQPYASLDATGCPGANQWPLRITLTPAGLAPIPTRLLLLRGKQKLDVLQAALAGEDISEYPIRVALQQPGPRLRVHWCS
Sequences:
>Translated_239_residues MSLQDNDRISLVRYDDLDEWTEAVASEMADLLEQEISRRGQARMLLSGGTTPAPVYESLAHRPLDWSRVEVGLVDERWLS PQDQDSNAWLVKQSFLDHAPAATFIPLVRPGKQLPECVHTANLQATHAEPACLAVMGMGGDGHTASLFPGSTDLPKALAS PQPYASLDATGCPGANQWPLRITLTPAGLAPIPTRLLLLRGKQKLDVLQAALAGEDISEYPIRVALQQPGPRLRVHWCS >Mature_238_residues SLQDNDRISLVRYDDLDEWTEAVASEMADLLEQEISRRGQARMLLSGGTTPAPVYESLAHRPLDWSRVEVGLVDERWLSP QDQDSNAWLVKQSFLDHAPAATFIPLVRPGKQLPECVHTANLQATHAEPACLAVMGMGGDGHTASLFPGSTDLPKALASP QPYASLDATGCPGANQWPLRITLTPAGLAPIPTRLLLLRGKQKLDVLQAALAGEDISEYPIRVALQQPGPRLRVHWCS
Specific function: Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate [H]
COG id: COG0363
COG function: function code G; 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005900 [H]
Pfam domain/function: NA
EC number: =3.1.1.31 [H]
Molecular weight: Translated: 26039; Mature: 25908
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLQDNDRISLVRYDDLDEWTEAVASEMADLLEQEISRRGQARMLLSGGTTPAPVYESLA CCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHH HRPLDWSRVEVGLVDERWLSPQDQDSNAWLVKQSFLDHAPAATFIPLVRPGKQLPECVHT CCCCCCCEEEEEEEHHHCCCCCCCCCCEEEEEHHHHCCCCCHHEECCCCCCHHHHHHHHH ANLQATHAEPACLAVMGMGGDGHTASLFPGSTDLPKALASPQPYASLDATGCPGANQWPL CCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCE RITLTPAGLAPIPTRLLLLRGKQKLDVLQAALAGEDISEYPIRVALQQPGPRLRVHWCS EEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEECC >Mature Secondary Structure SLQDNDRISLVRYDDLDEWTEAVASEMADLLEQEISRRGQARMLLSGGTTPAPVYESLA CCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHH HRPLDWSRVEVGLVDERWLSPQDQDSNAWLVKQSFLDHAPAATFIPLVRPGKQLPECVHT CCCCCCCEEEEEEEHHHCCCCCCCCCCEEEEEHHHHCCCCCHHEECCCCCCHHHHHHHHH ANLQATHAEPACLAVMGMGGDGHTASLFPGSTDLPKALASPQPYASLDATGCPGANQWPL CCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCE RITLTPAGLAPIPTRLLLLRGKQKLDVLQAALAGEDISEYPIRVALQQPGPRLRVHWCS EEEECCCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]