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The map label for this gene is yhfW [H]

Identifier: 66768283

GI number: 66768283

Start: 2364887

End: 2366098

Strand: Reverse

Name: yhfW [H]

Synonym: XC_1962

Alternate gene names: 66768283

Gene position: 2366098-2364887 (Counterclockwise)

Preceding gene: 66768286

Following gene: 66768277

Centisome position: 45.96

GC content: 65.51

Gene sequence:

>1212_bases
ATGAACCTCAAAAGTGGTTATCCGTTCTGGTCGATCCGCAACGGATTGATGCGTCCCTATCCGCGCCTGGAGCAGGACAC
CCACTGCGAGGTGGCAATCATTGGCGGCGGTGTGACCGCGGCATTGATCGCACACGAGCTGCTGCGCCACGGCCATGAGG
TGGTGGTGATCGAACAACGTGAGATCGGCTGGGGCAGCACCTCGGCCAGCACTGCGTTGCTGCAATACGAGATCGACACG
CCGATGGTGGATCTGGCGGCGCAGTACGGTATGCCTGCCGCCGCGCTGGCCTATGGTGCGTGCGCAAAAGCGATCCTGGA
TCTGCAGGAGCTTTGCGATGGCCTGGGCGGCTGCGACTTCACGCGCCAGGACAGCCTGTACTACGCCAGCCGTGCGCGGG
ATCTCAAGGATCTGCAGCGCGAACTGGACGCACGCAAGACACATGCGCTGCCGGTGGAGTGGATCGCCGGTGACGCGCTG
TGGCACGACTACGGCGTGCGTTCGGAAGGCGCCATTCTCAGCCGGCTCGCCGCCAGCGTGGACCCCTACCGCCTGTGTTA
CCGGTTGTTCGCAGAATGCGAGCAGTACGGCGGCCGCATCTACGACCGCAGCCCCATCGCCACCCTCCAGGCGCATGACC
AGCATGTCGATCTGCGCACCCAGGACGGGGTCAATGTGCGCGCGCGGCACGTGATCATGGCCGCCGGCTATGGCAACCAG
CAGTGGCTGTCGCAGCGGGTCGCACGCAACCGCAGCAGCTATGCCTTCGTCACCGACCCGCTGCACGACACCGATGTGGG
CGCGCTCAAGCACACCATGATGTGGGAGACCGCGCGCCCCTACCTCTACGTGCGCACCACCGCCGATGGCCGCGTGGTGG
CCGGCGGCGAAGACGACAGCATTGATATTCCCGCGCGCCGCGACGCACGCGTGCTCAGCAAGATGGACACGCTGCTGAAG
AAGATCGCCAAGGTGATGCCGGACGTGCGGCTGCGGCCGGTGTTCGCCTGGGGCGGCACGTTTGCCGAAACCGCCGATGG
GCTGCCGTTCTTCGGCACGCATTCCGAGCACGGCCCGCGTGTGGCCTTTGCCATGGCATATGGCGGCAATGGCATCACCT
ACAGCGCGATCGGCGCCGGCCTGCTACGTGCGCAACTGGAAGGCCGCGCTTACCCGTTGTCGGACTTGTTCGGCTTCTCG
CGACTGGGCTGA

Upstream 100 bases:

>100_bases
TGTTTGCGATTTGGTGACCGCCCGATGGCGGCTGCACGCGTCACGGCCGCTTCACCCCGCTTGATCGTCCAATCCAGTTC
CGCCCGCTCACCGACACCGC

Downstream 100 bases:

>100_bases
GACCACCACGGCCACCACCCGTGGCCGTGTATTGCGTAGGCATCTGCGGCGCGCTCAAGCGGGTTGCGCACGTGGATGCC
GCCGCACAGCAGGTACACCG

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MNLKSGYPFWSIRNGLMRPYPRLEQDTHCEVAIIGGGVTAALIAHELLRHGHEVVVIEQREIGWGSTSASTALLQYEIDT
PMVDLAAQYGMPAAALAYGACAKAILDLQELCDGLGGCDFTRQDSLYYASRARDLKDLQRELDARKTHALPVEWIAGDAL
WHDYGVRSEGAILSRLAASVDPYRLCYRLFAECEQYGGRIYDRSPIATLQAHDQHVDLRTQDGVNVRARHVIMAAGYGNQ
QWLSQRVARNRSSYAFVTDPLHDTDVGALKHTMMWETARPYLYVRTTADGRVVAGGEDDSIDIPARRDARVLSKMDTLLK
KIAKVMPDVRLRPVFAWGGTFAETADGLPFFGTHSEHGPRVAFAMAYGGNGITYSAIGAGLLRAQLEGRAYPLSDLFGFS
RLG

Sequences:

>Translated_403_residues
MNLKSGYPFWSIRNGLMRPYPRLEQDTHCEVAIIGGGVTAALIAHELLRHGHEVVVIEQREIGWGSTSASTALLQYEIDT
PMVDLAAQYGMPAAALAYGACAKAILDLQELCDGLGGCDFTRQDSLYYASRARDLKDLQRELDARKTHALPVEWIAGDAL
WHDYGVRSEGAILSRLAASVDPYRLCYRLFAECEQYGGRIYDRSPIATLQAHDQHVDLRTQDGVNVRARHVIMAAGYGNQ
QWLSQRVARNRSSYAFVTDPLHDTDVGALKHTMMWETARPYLYVRTTADGRVVAGGEDDSIDIPARRDARVLSKMDTLLK
KIAKVMPDVRLRPVFAWGGTFAETADGLPFFGTHSEHGPRVAFAMAYGGNGITYSAIGAGLLRAQLEGRAYPLSDLFGFS
RLG
>Mature_403_residues
MNLKSGYPFWSIRNGLMRPYPRLEQDTHCEVAIIGGGVTAALIAHELLRHGHEVVVIEQREIGWGSTSASTALLQYEIDT
PMVDLAAQYGMPAAALAYGACAKAILDLQELCDGLGGCDFTRQDSLYYASRARDLKDLQRELDARKTHALPVEWIAGDAL
WHDYGVRSEGAILSRLAASVDPYRLCYRLFAECEQYGGRIYDRSPIATLQAHDQHVDLRTQDGVNVRARHVIMAAGYGNQ
QWLSQRVARNRSSYAFVTDPLHDTDVGALKHTMMWETARPYLYVRTTADGRVVAGGEDDSIDIPARRDARVLSKMDTLLK
KIAKVMPDVRLRPVFAWGGTFAETADGLPFFGTHSEHGPRVAFAMAYGGNGITYSAIGAGLLRAQLEGRAYPLSDLFGFS
RLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1787559, Length=381, Percent_Identity=22.8346456692913, Blast_Score=72, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR017941
- InterPro:   IPR005805 [H]

Pfam domain/function: PF01266 DAO; PF00355 Rieske [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 44511; Mature: 44511

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKSGYPFWSIRNGLMRPYPRLEQDTHCEVAIIGGGVTAALIAHELLRHGHEVVVIEQR
CCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEEEEC
EIGWGSTSASTALLQYEIDTPMVDLAAQYGMPAAALAYGACAKAILDLQELCDGLGGCDF
CCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TRQDSLYYASRARDLKDLQRELDARKTHALPVEWIAGDALWHDYGVRSEGAILSRLAASV
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHEECCHHHHHCCCCCCCHHHHHHHHCC
DPYRLCYRLFAECEQYGGRIYDRSPIATLQAHDQHVDLRTQDGVNVRARHVIMAAGYGNQ
CHHHHHHHHHHHHHHHCCEEECCCCCEEEECCCCEECEECCCCCCEEEEEEEEEECCCCH
QWLSQRVARNRSSYAFVTDPLHDTDVGALKHTMMWETARPYLYVRTTADGRVVAGGEDDS
HHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCC
IDIPARRDARVLSKMDTLLKKIAKVMPDVRLRPVFAWGGTFAETADGLPFFGTHSEHGPR
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHCCCCCCCCCCCCCCCE
VAFAMAYGGNGITYSAIGAGLLRAQLEGRAYPLSDLFGFSRLG
EEEEEEECCCCEEHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MNLKSGYPFWSIRNGLMRPYPRLEQDTHCEVAIIGGGVTAALIAHELLRHGHEVVVIEQR
CCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEEEEC
EIGWGSTSASTALLQYEIDTPMVDLAAQYGMPAAALAYGACAKAILDLQELCDGLGGCDF
CCCCCCCCCCEEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TRQDSLYYASRARDLKDLQRELDARKTHALPVEWIAGDALWHDYGVRSEGAILSRLAASV
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHEECCHHHHHCCCCCCCHHHHHHHHCC
DPYRLCYRLFAECEQYGGRIYDRSPIATLQAHDQHVDLRTQDGVNVRARHVIMAAGYGNQ
CHHHHHHHHHHHHHHHCCEEECCCCCEEEECCCCEECEECCCCCCEEEEEEEEEECCCCH
QWLSQRVARNRSSYAFVTDPLHDTDVGALKHTMMWETARPYLYVRTTADGRVVAGGEDDS
HHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCCCC
IDIPARRDARVLSKMDTLLKKIAKVMPDVRLRPVFAWGGTFAETADGLPFFGTHSEHGPR
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCHHHHCCCCCCCCCCCCCCCE
VAFAMAYGGNGITYSAIGAGLLRAQLEGRAYPLSDLFGFSRLG
EEEEEEECCCCEEHHHHHHHHHHHHHCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]