| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is pssA [H]
Identifier: 66768278
GI number: 66768278
Start: 2361249
End: 2361845
Strand: Direct
Name: pssA [H]
Synonym: XC_1957
Alternate gene names: 66768278
Gene position: 2361249-2361845 (Clockwise)
Preceding gene: 66768276
Following gene: 66768279
Centisome position: 45.86
GC content: 66.67
Gene sequence:
>597_bases ATGCTGCGCGACTTTCAACTCGCAGACTGGTTCACGCTGGCAAACGCCTTTTGCGGCACCGGGGCGGTGTTTGCGGCCAT GCGGTTTCTGCAGGAAGGCCACCGCGGCGACCTGTTGCTGGGCATGGCGCTGATTCCGCTGGCCTTCGTCTTCGATGCGC TGGACGGTCACGTGGCGCGCTGGCGCAAGGCGTCCTCGACGCTGGGCCGCGAGCTGGATTCGTTGGCCGACGTGATTTCG TTCGGCGTGGCGCCAGCCGCGCTTGGCTATGCCTGCGGCATGCGCGGCGGCTGGGACTGGCTGGTGCTCAGTTATTTCGT CTGCTGCGGCGTGAGCCGGCTGGCGCGCTACAACGTGACCGCCGAAGAGATCGCCGGCGAGGCCGACAAGGTGCCGTATT TCGAAGGCACACCGATCCCCACCAGCCTGGTGCTGGTGATCCTGCTGGCGGTGGCGGCCAGCACCGGGCATATCGGCCAG ACGTTGTGGTGGGGGCAGTGGCAGCTCGGGCCCTGGCAATTCCACCCGCTGGTGCTGCTGTTCGCGGTGTCCGGCTCGCT GATGATCAGCAAGACGCTGCGCATCCCCAAGCCCTGA
Upstream 100 bases:
>100_bases CAGGGTAGCCGAGCACGTTGAAACGGTCGCCTGCGCGTCGCGCGCGCGTTACCCTTTGCGCCTCGATGCCCTCAGGTTCC GCATGAAACGCCATTTTTCG
Downstream 100 bases:
>100_bases CCGGTGCGGCGGAACACACGCGGTAGGATGGCTGGGTAGACCAGCCACGGGAGTGGACGATGACAACCAGCGGTTCGGAC AACGGCAACTTCGAAGACAA
Product: CDP-diacylglycerol-serine o-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylserine synthase [H]
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MLRDFQLADWFTLANAFCGTGAVFAAMRFLQEGHRGDLLLGMALIPLAFVFDALDGHVARWRKASSTLGRELDSLADVIS FGVAPAALGYACGMRGGWDWLVLSYFVCCGVSRLARYNVTAEEIAGEADKVPYFEGTPIPTSLVLVILLAVAASTGHIGQ TLWWGQWQLGPWQFHPLVLLFAVSGSLMISKTLRIPKP
Sequences:
>Translated_198_residues MLRDFQLADWFTLANAFCGTGAVFAAMRFLQEGHRGDLLLGMALIPLAFVFDALDGHVARWRKASSTLGRELDSLADVIS FGVAPAALGYACGMRGGWDWLVLSYFVCCGVSRLARYNVTAEEIAGEADKVPYFEGTPIPTSLVLVILLAVAASTGHIGQ TLWWGQWQLGPWQFHPLVLLFAVSGSLMISKTLRIPKP >Mature_198_residues MLRDFQLADWFTLANAFCGTGAVFAAMRFLQEGHRGDLLLGMALIPLAFVFDALDGHVARWRKASSTLGRELDSLADVIS FGVAPAALGYACGMRGGWDWLVLSYFVCCGVSRLARYNVTAEEIAGEADKVPYFEGTPIPTSLVLVILLAVAASTGHIGQ TLWWGQWQLGPWQFHPLVLLFAVSGSLMISKTLRIPKP
Specific function: Unknown
COG id: COG1183
COG function: function code I; Phosphatidylserine synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320864, Length=201, Percent_Identity=42.7860696517413, Blast_Score=169, Evalue=2e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004533 - InterPro: IPR000462 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.8 [H]
Molecular weight: Translated: 21575; Mature: 21575
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRDFQLADWFTLANAFCGTGAVFAAMRFLQEGHRGDLLLGMALIPLAFVFDALDGHVAR CCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH WRKASSTLGRELDSLADVISFGVAPAALGYACGMRGGWDWLVLSYFVCCGVSRLARYNVT HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC AEEIAGEADKVPYFEGTPIPTSLVLVILLAVAASTGHIGQTLWWGQWQLGPWQFHPLVLL HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCHHHHHHHH FAVSGSLMISKTLRIPKP HHHCCCCEEHHCCCCCCC >Mature Secondary Structure MLRDFQLADWFTLANAFCGTGAVFAAMRFLQEGHRGDLLLGMALIPLAFVFDALDGHVAR CCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH WRKASSTLGRELDSLADVISFGVAPAALGYACGMRGGWDWLVLSYFVCCGVSRLARYNVT HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC AEEIAGEADKVPYFEGTPIPTSLVLVILLAVAASTGHIGQTLWWGQWQLGPWQFHPLVLL HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCHHHHHHHH FAVSGSLMISKTLRIPKP HHHCCCCEEHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]