| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is guaB [H]
Identifier: 66768255
GI number: 66768255
Start: 2334054
End: 2335511
Strand: Direct
Name: guaB [H]
Synonym: XC_1934
Alternate gene names: 66768255
Gene position: 2334054-2335511 (Clockwise)
Preceding gene: 66768254
Following gene: 66768256
Centisome position: 45.33
GC content: 64.54
Gene sequence:
>1458_bases ATGCTCCGCATCCAGGCTGAAGCTCTTACCTACGACGACGTCTCGCTCGTCCCCGCGCATTCCATTGTCCTGCCAAAGGA CGTCAGCCTTGAGACTCGGCTGACACGCGACCTGCGCCTCAAACTGCCGATCTTGTCCGCGGCCATGGATACGGTGACCG AACACCGCCTGGCGGTGGCGATGGCCCAGCTGGGCGGCATCGGCATCATCCACAAGAACCTGACCCCGGCGCAGCAGGCG GGCGAGGTGGCCAAGGTCAAGAAGTTCGAGTCCGGCGTGATCACCGAGCCGTTTACGGTGAGCCCGGACACCACCATCGG TGAAGTGATCGCGCTGACCCGCGCGCGCAACATCTCCGGCGTGCCGGTGGTGGATGGCAGCGAACTGGTTGGCATCGTGA CCAGCCGCGACATGCGCTTCGAAAAGAAGCTCGACGATCCGGTCCGCCACATCATGACCAAGAAGGATCGCCTGATCACT GTGCGCGAAGGCGCCAGCGATGAGGAAGTGCTCGAGCTGCTGCATCGCAACCGCATCGAAAAGATCCTGGTGGTCAACGA CAGCTTCGAGCTGCGCGGGCTGATTACGGTCAAGGACATCCAGAAGAAGACCGACAACCCCAACGCCGCCAAGGACGGCG CCAAGCGCTTGCTGGTCGGTGCGGCGGTGGGTGTGGGCGGCGATACCGAACAACGTATCGAACTGCTCGCTGCTGCGGGT GTGGACGTGGTCATCGTCGATACCGCGCACGGCCATTCGCAAGGCGTGATCGACCGCGTGGCCTGGGTCAAGAAGACCTA CCCGCACCTGCAGGTGATCGGCGGCAATATCGTCACTGGCGATGCAGCGCTGGCGCTGATGGATGCCGGCGCCGACGCGG TCAAGGTCGGCGTGGGCCCGGGGTCGATCTGCACCACCCGTGTGGTGGCCGGTGTGGGCGTGCCGCAGATCACCGCGGTG GATATGGTGGCCGAAGCACTGCAGGACCGCATCCCGCTGATTGCCGATGGCGGCATCCGTTACTCCGGCGATATCGGCAA GGCGCTGGTGGCCGGCGCGTCCACAGTGATGGTCGGCGGCTTGCTGGCTGGTACCGAGGAAGCGCCTGGCGAAGTCGAGT TGTTCCAGGGCCGCAGCTACAAGAGCTACCGCGGCATGGGCAGCCTGGGCGCGATGGAGAAGGGGTCCAAGGACCGCTAT TTCCAGGACGCTTCCGACGCCGACAAGCTGGTGCCCGAAGGCATCGAAGGCCGCGTGCCGTATCGCGGCCCGGTGGGCGG CATCATCCATCAGCTGATCGGTGGCCTGCGCGCAACCATGGGCTACGTTGGCTGCGCCACGGTCGAGGAAATGCGCACCA AGCCGAAGTTCGTCAAGATCACCGGCGCCGGTCAACGCGAAAGCCATGTGCACGACGTGCAGATCACGAAAGAGCCGCCG AACTATCGCGCGGGCTAA
Upstream 100 bases:
>100_bases GTTGGTGTAGCGCAGCATTGCGGCGGCACTCAGCTGCCGCAGTGTCTTCGCGGCCGCTTTCAGGGTAAAATGTCGCGCTT CCCCAAACTCGGGTCCGCCG
Downstream 100 bases:
>100_bases TTCGAATGTGGAAGGCCTCGCTCGCCTATCTTGCGGTCATCTCGGCAATGACCGTGGTGGCGCTGGGATTGCTGGCGGTG TCTTCCGTGTTGTATCGCTG
Product: inosine 5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 485; Mature: 485
Protein sequence:
>485_residues MLRIQAEALTYDDVSLVPAHSIVLPKDVSLETRLTRDLRLKLPILSAAMDTVTEHRLAVAMAQLGGIGIIHKNLTPAQQA GEVAKVKKFESGVITEPFTVSPDTTIGEVIALTRARNISGVPVVDGSELVGIVTSRDMRFEKKLDDPVRHIMTKKDRLIT VREGASDEEVLELLHRNRIEKILVVNDSFELRGLITVKDIQKKTDNPNAAKDGAKRLLVGAAVGVGGDTEQRIELLAAAG VDVVIVDTAHGHSQGVIDRVAWVKKTYPHLQVIGGNIVTGDAALALMDAGADAVKVGVGPGSICTTRVVAGVGVPQITAV DMVAEALQDRIPLIADGGIRYSGDIGKALVAGASTVMVGGLLAGTEEAPGEVELFQGRSYKSYRGMGSLGAMEKGSKDRY FQDASDADKLVPEGIEGRVPYRGPVGGIIHQLIGGLRATMGYVGCATVEEMRTKPKFVKITGAGQRESHVHDVQITKEPP NYRAG
Sequences:
>Translated_485_residues MLRIQAEALTYDDVSLVPAHSIVLPKDVSLETRLTRDLRLKLPILSAAMDTVTEHRLAVAMAQLGGIGIIHKNLTPAQQA GEVAKVKKFESGVITEPFTVSPDTTIGEVIALTRARNISGVPVVDGSELVGIVTSRDMRFEKKLDDPVRHIMTKKDRLIT VREGASDEEVLELLHRNRIEKILVVNDSFELRGLITVKDIQKKTDNPNAAKDGAKRLLVGAAVGVGGDTEQRIELLAAAG VDVVIVDTAHGHSQGVIDRVAWVKKTYPHLQVIGGNIVTGDAALALMDAGADAVKVGVGPGSICTTRVVAGVGVPQITAV DMVAEALQDRIPLIADGGIRYSGDIGKALVAGASTVMVGGLLAGTEEAPGEVELFQGRSYKSYRGMGSLGAMEKGSKDRY FQDASDADKLVPEGIEGRVPYRGPVGGIIHQLIGGLRATMGYVGCATVEEMRTKPKFVKITGAGQRESHVHDVQITKEPP NYRAG >Mature_485_residues MLRIQAEALTYDDVSLVPAHSIVLPKDVSLETRLTRDLRLKLPILSAAMDTVTEHRLAVAMAQLGGIGIIHKNLTPAQQA GEVAKVKKFESGVITEPFTVSPDTTIGEVIALTRARNISGVPVVDGSELVGIVTSRDMRFEKKLDDPVRHIMTKKDRLIT VREGASDEEVLELLHRNRIEKILVVNDSFELRGLITVKDIQKKTDNPNAAKDGAKRLLVGAAVGVGGDTEQRIELLAAAG VDVVIVDTAHGHSQGVIDRVAWVKKTYPHLQVIGGNIVTGDAALALMDAGADAVKVGVGPGSICTTRVVAGVGVPQITAV DMVAEALQDRIPLIADGGIRYSGDIGKALVAGASTVMVGGLLAGTEEAPGEVELFQGRSYKSYRGMGSLGAMEKGSKDRY FQDASDADKLVPEGIEGRVPYRGPVGGIIHQLIGGLRATMGYVGCATVEEMRTKPKFVKITGAGQRESHVHDVQITKEPP NYRAG
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI217035146, Length=485, Percent_Identity=44.5360824742268, Blast_Score=365, Evalue=1e-101, Organism=Homo sapiens, GI156616279, Length=485, Percent_Identity=44.5360824742268, Blast_Score=364, Evalue=1e-101, Organism=Homo sapiens, GI34328928, Length=485, Percent_Identity=44.5360824742268, Blast_Score=364, Evalue=1e-100, Organism=Homo sapiens, GI34328930, Length=485, Percent_Identity=44.5360824742268, Blast_Score=363, Evalue=1e-100, Organism=Homo sapiens, GI66933016, Length=483, Percent_Identity=43.6853002070393, Blast_Score=363, Evalue=1e-100, Organism=Homo sapiens, GI217035152, Length=474, Percent_Identity=44.5147679324894, Blast_Score=354, Evalue=8e-98, Organism=Homo sapiens, GI217035148, Length=485, Percent_Identity=43.7113402061856, Blast_Score=353, Evalue=2e-97, Organism=Homo sapiens, GI217035150, Length=485, Percent_Identity=41.2371134020619, Blast_Score=321, Evalue=1e-87, Organism=Homo sapiens, GI50541956, Length=246, Percent_Identity=38.6178861788618, Blast_Score=159, Evalue=4e-39, Organism=Homo sapiens, GI50541954, Length=246, Percent_Identity=38.6178861788618, Blast_Score=159, Evalue=5e-39, Organism=Homo sapiens, GI50541952, Length=246, Percent_Identity=38.6178861788618, Blast_Score=159, Evalue=5e-39, Organism=Homo sapiens, GI50541948, Length=246, Percent_Identity=38.6178861788618, Blast_Score=159, Evalue=5e-39, Organism=Homo sapiens, GI156104880, Length=261, Percent_Identity=36.7816091954023, Blast_Score=158, Evalue=1e-38, Organism=Escherichia coli, GI1788855, Length=487, Percent_Identity=63.0390143737166, Blast_Score=568, Evalue=1e-163, Organism=Escherichia coli, GI1786293, Length=267, Percent_Identity=34.4569288389513, Blast_Score=149, Evalue=6e-37, Organism=Caenorhabditis elegans, GI71994385, Length=499, Percent_Identity=40.0801603206413, Blast_Score=310, Evalue=7e-85, Organism=Caenorhabditis elegans, GI71994389, Length=421, Percent_Identity=42.5178147268409, Blast_Score=293, Evalue=1e-79, Organism=Caenorhabditis elegans, GI17560440, Length=255, Percent_Identity=33.7254901960784, Blast_Score=156, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6323585, Length=487, Percent_Identity=40.2464065708419, Blast_Score=334, Evalue=2e-92, Organism=Saccharomyces cerevisiae, GI6322012, Length=483, Percent_Identity=39.9585921325052, Blast_Score=331, Evalue=1e-91, Organism=Saccharomyces cerevisiae, GI6323464, Length=483, Percent_Identity=40.1656314699793, Blast_Score=318, Evalue=8e-88, Organism=Saccharomyces cerevisiae, GI6319352, Length=338, Percent_Identity=39.9408284023669, Blast_Score=242, Evalue=1e-64, Organism=Saccharomyces cerevisiae, GI6319353, Length=141, Percent_Identity=36.8794326241135, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI24641071, Length=481, Percent_Identity=41.7879417879418, Blast_Score=343, Evalue=2e-94, Organism=Drosophila melanogaster, GI24641073, Length=481, Percent_Identity=41.7879417879418, Blast_Score=343, Evalue=2e-94, Organism=Drosophila melanogaster, GI28571163, Length=439, Percent_Identity=42.5968109339408, Blast_Score=313, Evalue=2e-85,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 51581; Mature: 51581
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRIQAEALTYDDVSLVPAHSIVLPKDVSLETRLTRDLRLKLPILSAAMDTVTEHRLAVA CEEEEEEEEEECCCEECCCCEEECCCCCCHHHHHCCCEEEECHHHHHHHHHHHHHHHHHH MAQLGGIGIIHKNLTPAQQAGEVAKVKKFESGVITEPFTVSPDTTIGEVIALTRARNISG HHHHCCEEEEECCCCCHHHCCCHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHCCCCCC VPVVDGSELVGIVTSRDMRFEKKLDDPVRHIMTKKDRLITVREGASDEEVLELLHRNRIE CEEECCCCEEEEEECCCCHHHHHCCHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCC KILVVNDSFELRGLITVKDIQKKTDNPNAAKDGAKRLLVGAAVGVGGDTEQRIELLAAAG EEEEECCCCCEEEEEEEHHHHHHCCCCCHHHHHHHHEEEEEEECCCCCHHHHHHHHHHCC VDVVIVDTAHGHSQGVIDRVAWVKKTYPHLQVIGGNIVTGDAALALMDAGADAVKVGVGP CCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCEEEECCCEEEEEECCCCEEEEECCC GSICTTRVVAGVGVPQITAVDMVAEALQDRIPLIADGGIRYSGDIGKALVAGASTVMVGG CCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEECCCEEECCCHHHHHHHCCHHHHHHH LLAGTEEAPGEVELFQGRSYKSYRGMGSLGAMEKGSKDRYFQDASDADKLVPEGIEGRVP EEECCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCC YRGPVGGIIHQLIGGLRATMGYVGCATVEEMRTKPKFVKITGAGQRESHVHDVQITKEPP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEECCCC NYRAG CCCCC >Mature Secondary Structure MLRIQAEALTYDDVSLVPAHSIVLPKDVSLETRLTRDLRLKLPILSAAMDTVTEHRLAVA CEEEEEEEEEECCCEECCCCEEECCCCCCHHHHHCCCEEEECHHHHHHHHHHHHHHHHHH MAQLGGIGIIHKNLTPAQQAGEVAKVKKFESGVITEPFTVSPDTTIGEVIALTRARNISG HHHHCCEEEEECCCCCHHHCCCHHHHHHHCCCCCCCCEECCCCCHHHHHHHHHHCCCCCC VPVVDGSELVGIVTSRDMRFEKKLDDPVRHIMTKKDRLITVREGASDEEVLELLHRNRIE CEEECCCCEEEEEECCCCHHHHHCCHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCC KILVVNDSFELRGLITVKDIQKKTDNPNAAKDGAKRLLVGAAVGVGGDTEQRIELLAAAG EEEEECCCCCEEEEEEEHHHHHHCCCCCHHHHHHHHEEEEEEECCCCCHHHHHHHHHHCC VDVVIVDTAHGHSQGVIDRVAWVKKTYPHLQVIGGNIVTGDAALALMDAGADAVKVGVGP CCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCEEEECCCEEEEEECCCCEEEEECCC GSICTTRVVAGVGVPQITAVDMVAEALQDRIPLIADGGIRYSGDIGKALVAGASTVMVGG CCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEECCCEEECCCHHHHHHHCCHHHHHHH LLAGTEEAPGEVELFQGRSYKSYRGMGSLGAMEKGSKDRYFQDASDADKLVPEGIEGRVP EEECCCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCC YRGPVGGIIHQLIGGLRATMGYVGCATVEEMRTKPKFVKITGAGQRESHVHDVQITKEPP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEECCCC NYRAG CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA