| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is folD [H]
Identifier: 66768254
GI number: 66768254
Start: 2333066
End: 2333950
Strand: Direct
Name: folD [H]
Synonym: XC_1933
Alternate gene names: 66768254
Gene position: 2333066-2333950 (Clockwise)
Preceding gene: 66768252
Following gene: 66768255
Centisome position: 45.31
GC content: 69.04
Gene sequence:
>885_bases ATGACCGCTCCCGCGCCAGCTGCCCTCGCTCCGGCCCGCCTCCTCGATGGTCGCCGCATTGCCGAGGAATTGCTCGACGG TCTGAAGCTGCGCGTGGATGCGCGCCTGGCGGCGGGCAAGACCCGGCCCGGGCTGGCGGTGGTGCTGGTAGGCGGCGATC CGGCTTCGTCGGTGTATGTGCGCAACAAGCGCCGTGCGGCCGAAAAAGTGGGCATCGAGGCCTTCGACTACGACCTGCCA CAAGGCACCACCGAAGCCGAGCTGGCCGCGTTGATCGACCAGCTCAACACCGATCCCAAGATCCACGGCATCCTGATCCA GTTGCCGCTGCCGGGCATTCCCGATGCCAACCGGTTGATCCAGCGCATCGACCCGCGCAAGGACGTGGACGGGTTCCATC CGCAGAACGTCGGGCATCTGGCGCTGCGCGAATTCGGTTTGCGGCCGTGTACCCCGCGCGGCATCGTGACCTTGCTGGCG CATACCGACCAGCCGGTGCGCGGGCGCAACGCCACCATCGTCGGGGTGAGTAACCATGTGGGCCGCCCGATGGGGCTGGA GCTGCTGATTGCCGGGTGCACGGTGACCAGCTGCCACAAGTTCACCCCGCCGGATGTGCTGGAAGCCAGCGTGCGCAACG CCGACATCCTGGTGGTGGCGGTGGGCCGGCCGGGGCTGATCCCGGGCGAATGGGTCAAGCCTGGGGCGGTGGTCATCGAC GTGGGCATCAACCGCCTGGACGATGGGCGCCTGGTCGGCGATGTGGGGTTCGAGGCCGCAGCGCAGCGCGCCGGCTGGAT CACCCCGGTGCCGGGCGGGGTGGGGCCGATGACGGTGGCCACGCTGATGCAGAACACGCTCGAGGCGGCCGATGCGGCTG GTTGA
Upstream 100 bases:
>100_bases CTGCAGCAGGCGGCGGAACGCGGCGGCTTCGATCGAAGTGGTGTCGGTCATGGCGGAATCGGGGACAATAGACGGCCTTC GACTCTACACCTGACGCCCC
Downstream 100 bases:
>100_bases GCCGTTGGTGTAGCGCAGCATTGCGGCGGCACTCAGCTGCCGCAGTGTCTTCGCGGCCGCTTTCAGGGTAAAATGTCGCG CTTCCCCAAACTCGGGTCCG
Product: bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase [H]
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MTAPAPAALAPARLLDGRRIAEELLDGLKLRVDARLAAGKTRPGLAVVLVGGDPASSVYVRNKRRAAEKVGIEAFDYDLP QGTTEAELAALIDQLNTDPKIHGILIQLPLPGIPDANRLIQRIDPRKDVDGFHPQNVGHLALREFGLRPCTPRGIVTLLA HTDQPVRGRNATIVGVSNHVGRPMGLELLIAGCTVTSCHKFTPPDVLEASVRNADILVVAVGRPGLIPGEWVKPGAVVID VGINRLDDGRLVGDVGFEAAAQRAGWITPVPGGVGPMTVATLMQNTLEAADAAG
Sequences:
>Translated_294_residues MTAPAPAALAPARLLDGRRIAEELLDGLKLRVDARLAAGKTRPGLAVVLVGGDPASSVYVRNKRRAAEKVGIEAFDYDLP QGTTEAELAALIDQLNTDPKIHGILIQLPLPGIPDANRLIQRIDPRKDVDGFHPQNVGHLALREFGLRPCTPRGIVTLLA HTDQPVRGRNATIVGVSNHVGRPMGLELLIAGCTVTSCHKFTPPDVLEASVRNADILVVAVGRPGLIPGEWVKPGAVVID VGINRLDDGRLVGDVGFEAAAQRAGWITPVPGGVGPMTVATLMQNTLEAADAAG >Mature_293_residues TAPAPAALAPARLLDGRRIAEELLDGLKLRVDARLAAGKTRPGLAVVLVGGDPASSVYVRNKRRAAEKVGIEAFDYDLPQ GTTEAELAALIDQLNTDPKIHGILIQLPLPGIPDANRLIQRIDPRKDVDGFHPQNVGHLALREFGLRPCTPRGIVTLLAH TDQPVRGRNATIVGVSNHVGRPMGLELLIAGCTVTSCHKFTPPDVLEASVRNADILVVAVGRPGLIPGEWVKPGAVVIDV GINRLDDGRLVGDVGFEAAAQRAGWITPVPGGVGPMTVATLMQNTLEAADAAG
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate [H]
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family [H]
Homologues:
Organism=Homo sapiens, GI222136639, Length=293, Percent_Identity=44.3686006825939, Blast_Score=225, Evalue=5e-59, Organism=Homo sapiens, GI94721354, Length=292, Percent_Identity=44.1780821917808, Blast_Score=223, Evalue=1e-58, Organism=Homo sapiens, GI222418558, Length=292, Percent_Identity=43.4931506849315, Blast_Score=223, Evalue=1e-58, Organism=Homo sapiens, GI36796743, Length=208, Percent_Identity=25.4807692307692, Blast_Score=68, Evalue=1e-11, Organism=Escherichia coli, GI1786741, Length=279, Percent_Identity=59.4982078853047, Blast_Score=331, Evalue=3e-92, Organism=Caenorhabditis elegans, GI17568735, Length=256, Percent_Identity=43.75, Blast_Score=177, Evalue=4e-45, Organism=Saccharomyces cerevisiae, GI6321643, Length=296, Percent_Identity=41.8918918918919, Blast_Score=206, Evalue=3e-54, Organism=Saccharomyces cerevisiae, GI6319558, Length=286, Percent_Identity=41.6083916083916, Blast_Score=198, Evalue=1e-51, Organism=Saccharomyces cerevisiae, GI6322933, Length=323, Percent_Identity=26.0061919504644, Blast_Score=76, Evalue=7e-15, Organism=Drosophila melanogaster, GI17136816, Length=292, Percent_Identity=48.972602739726, Blast_Score=247, Evalue=6e-66, Organism=Drosophila melanogaster, GI17136818, Length=292, Percent_Identity=48.972602739726, Blast_Score=247, Evalue=7e-66, Organism=Drosophila melanogaster, GI62472483, Length=299, Percent_Identity=42.4749163879599, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI45551871, Length=299, Percent_Identity=42.4749163879599, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI24645718, Length=292, Percent_Identity=42.8082191780822, Blast_Score=211, Evalue=3e-55, Organism=Drosophila melanogaster, GI17137370, Length=292, Percent_Identity=42.8082191780822, Blast_Score=211, Evalue=3e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020867 - InterPro: IPR020631 [H]
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C [H]
EC number: =1.5.1.5; =3.5.4.9 [H]
Molecular weight: Translated: 30932; Mature: 30801
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: PS00767 THF_DHG_CYH_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPAPAALAPARLLDGRRIAEELLDGLKLRVDARLAAGKTRPGLAVVLVGGDPASSVYV CCCCCCCHHHHHHHHCHHHHHHHHHCCCEEEEEEEEECCCCCCCEEEEEECCCCCCCEEE RNKRRAAEKVGIEAFDYDLPQGTTEAELAALIDQLNTDPKIHGILIQLPLPGIPDANRLI ECHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHH QRIDPRKDVDGFHPQNVGHLALREFGLRPCTPRGIVTLLAHTDQPVRGRNATIVGVSNHV HHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHEEEEEECCCCCCCCCCEEEEECHHCC GRPMGLELLIAGCTVTSCHKFTPPDVLEASVRNADILVVAVGRPGLIPGEWVKPGAVVID CCCCCEEEEEECCCEECCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEE VGINRLDDGRLVGDVGFEAAAQRAGWITPVPGGVGPMTVATLMQNTLEAADAAG ECCCCCCCCEEEECCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TAPAPAALAPARLLDGRRIAEELLDGLKLRVDARLAAGKTRPGLAVVLVGGDPASSVYV CCCCCCHHHHHHHHCHHHHHHHHHCCCEEEEEEEEECCCCCCCEEEEEECCCCCCCEEE RNKRRAAEKVGIEAFDYDLPQGTTEAELAALIDQLNTDPKIHGILIQLPLPGIPDANRLI ECHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHH QRIDPRKDVDGFHPQNVGHLALREFGLRPCTPRGIVTLLAHTDQPVRGRNATIVGVSNHV HHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHEEEEEECCCCCCCCCCEEEEECHHCC GRPMGLELLIAGCTVTSCHKFTPPDVLEASVRNADILVVAVGRPGLIPGEWVKPGAVVID CCCCCEEEEEECCCEECCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEE VGINRLDDGRLVGDVGFEAAAQRAGWITPVPGGVGPMTVATLMQNTLEAADAAG ECCCCCCCCEEEECCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]